Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1991 Jun;173(12):3795–3802. doi: 10.1128/jb.173.12.3795-3802.1991

Purification and characterization of a 1,2-dihydroxynaphthalene dioxygenase from a bacterium that degrades naphthalenesulfonic acids.

A E Kuhm 1, A Stolz 1, K L Ngai 1, H J Knackmuss 1
PMCID: PMC208010  PMID: 2050635

Abstract

1,2-Dihydroxynaphthalene dioxygenase was purified to homogeneity from a bacterium that degrades naphthalenesulfonic acids (strain BN6). The enzyme requires Fe2+ for maximal activity and consists of eight identical subunits with a molecular weight of about 33,000. Analysis of the NH2-terminal amino acid sequence revealed a high degree of homology (22 of 29 amino acids) with the NH2-terminal amino acid sequence of 2,3-dihydroxybiphenyl dioxygenase from strain Pseudomonas paucimobilis Q1. 1,2-Dihydroxynaphthalene dioxygenase from strain BN6 shows a wide substrate specificity and also cleaves 5-, 6-, and 7-hydroxy-1,2-dihydroxynaphthalene, 2,3- and 3,4-dihydroxybiphenyl, catechol, and 3-methyl- and 4-methylcatechol. Similar activities against the hydroxy-1,2-dihydroxynaphthalenes were also found in cell extracts from naphthalene-degrading bacteria.

Full text

PDF
3796

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Barnsley E. A. Naphthalene metabolism by pseudomonads: the oxidation of 1,2-dihydroxynaphthalene to 2-hydroxychromene-2-carboxylic acid and the formation of 2'-hydroxybenzalpyruvate. Biochem Biophys Res Commun. 1976 Oct 4;72(3):1116–1121. doi: 10.1016/s0006-291x(76)80247-1. [DOI] [PubMed] [Google Scholar]
  2. Bradford M. M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 1976 May 7;72:248–254. doi: 10.1006/abio.1976.9999. [DOI] [PubMed] [Google Scholar]
  3. Brilon C., Beckmann W., Hellwig M., Knackmuss H. J. Enrichment and isolation of naphthalenesulfonic Acid-utilizing pseudomonads. Appl Environ Microbiol. 1981 Jul;42(1):39–43. doi: 10.1128/aem.42.1.39-43.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Brilon C., Beckmann W., Knackmuss H. J. Catabolism of Naphthalenesulfonic Acids by Pseudomonas sp. A3 and Pseudomonas sp. C22. Appl Environ Microbiol. 1981 Jul;42(1):44–55. doi: 10.1128/aem.42.1.44-55.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Catelani D., Colombi A. Metabolism of biphenyl. Structure and physicochemical properties of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid, the meta-cleavage product from 2,3-dihydroxybiphenyl by Pseudomonas putida. Biochem J. 1974 Nov;143(2):431–434. doi: 10.1042/bj1430431. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Connors M. A., Barnsley E. A. Naphthalene plasmids in pseudomonads. J Bacteriol. 1982 Mar;149(3):1096–1101. doi: 10.1128/jb.149.3.1096-1101.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Davies J. I., Evans W. C. Oxidative metabolism of naphthalene by soil pseudomonads. The ring-fission mechanism. Biochem J. 1964 May;91(2):251–261. doi: 10.1042/bj0910251. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Dorn E., Hellwig M., Reineke W., Knackmuss H. J. Isolation and characterization of a 3-chlorobenzoate degrading pseudomonad. Arch Microbiol. 1974;99(1):61–70. doi: 10.1007/BF00696222. [DOI] [PubMed] [Google Scholar]
  9. Dunn N. W., Gunsalus I. C. Transmissible plasmid coding early enzymes of naphthalene oxidation in Pseudomonas putida. J Bacteriol. 1973 Jun;114(3):974–979. doi: 10.1128/jb.114.3.974-979.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Eckhardt T. A rapid method for the identification of plasmid desoxyribonucleic acid in bacteria. Plasmid. 1978 Sep;1(4):584–588. doi: 10.1016/0147-619x(78)90016-1. [DOI] [PubMed] [Google Scholar]
  11. Furukawa K., Arimura N., Miyazaki T. Nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene of Pseudomonas pseudoalcaligenes. J Bacteriol. 1987 Jan;169(1):427–429. doi: 10.1128/jb.169.1.427-429.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Furukawa K., Simon J. R., Chakrabarty A. M. Common induction and regulation of biphenyl, xylene/toluene, and salicylate catabolism in Pseudomonas paucimobilis. J Bacteriol. 1983 Jun;154(3):1356–1362. doi: 10.1128/jb.154.3.1356-1362.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Hansen J. B., Olsen R. H. Isolation of large bacterial plasmids and characterization of the P2 incompatibility group plasmids pMG1 and pMG5. J Bacteriol. 1978 Jul;135(1):227–238. doi: 10.1128/jb.135.1.227-238.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Harayama S., Rekik M. Bacterial aromatic ring-cleavage enzymes are classified into two different gene families. J Biol Chem. 1989 Sep 15;264(26):15328–15333. [PubMed] [Google Scholar]
  15. Kado C. I., Liu S. T. Rapid procedure for detection and isolation of large and small plasmids. J Bacteriol. 1981 Mar;145(3):1365–1373. doi: 10.1128/jb.145.3.1365-1373.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Kimbara K., Hashimoto T., Fukuda M., Koana T., Takagi M., Oishi M., Yano K. Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102. J Bacteriol. 1989 May;171(5):2740–2747. doi: 10.1128/jb.171.5.2740-2747.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  18. Merril C. R., Goldman D., Sedman S. A., Ebert M. H. Ultrasensitive stain for proteins in polyacrylamide gels shows regional variation in cerebrospinal fluid proteins. Science. 1981 Mar 27;211(4489):1437–1438. doi: 10.1126/science.6162199. [DOI] [PubMed] [Google Scholar]
  19. Nakai C., Kagamiyama H., Nozaki M., Nakazawa T., Inouye S., Ebina Y., Nakazawa A. Complete nucleotide sequence of the metapyrocatechase gene on the TOI plasmid of Pseudomonas putida mt-2. J Biol Chem. 1983 Mar 10;258(5):2923–2928. [PubMed] [Google Scholar]
  20. Nörtemann B., Baumgarten J., Rast H. G., Knackmuss H. J. Bacterial communities degrading amino- and hydroxynaphthalene-2-sulfonates. Appl Environ Microbiol. 1986 Nov;52(5):1195–1202. doi: 10.1128/aem.52.5.1195-1202.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Patel T. R., Barnsley E. A. Naphthalene metabolism by pseudomonads: purification and properties of 1,2-dihydroxynaphthalene oxygenase. J Bacteriol. 1980 Aug;143(2):668–673. doi: 10.1128/jb.143.2.668-673.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Patel T. R., Gibson D. T. Purification and propeties of (plus)-cis-naphthalene dihydrodiol dehydrogenase of Pseudomonas putida. J Bacteriol. 1974 Sep;119(3):879–888. doi: 10.1128/jb.119.3.879-888.1974. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Sala-Trepat J. M., Evans W. C. The meta cleavage of catechol by Azotobacter species. 4-Oxalocrotonate pathway. Eur J Biochem. 1971 Jun 11;20(3):400–413. doi: 10.1111/j.1432-1033.1971.tb01406.x. [DOI] [PubMed] [Google Scholar]
  24. Serdar C. M., Gibson D. T. Studies of nucleotide sequence homology between naphthalene-utilizing strains of bacteria. Biochem Biophys Res Commun. 1989 Oct 31;164(2):772–779. doi: 10.1016/0006-291x(89)91526-x. [DOI] [PubMed] [Google Scholar]
  25. Shamsuzzaman K. M., Barnsley E. A. The regulation of naphthalene metabolism in pseudomonads. Biochem Biophys Res Commun. 1974 Sep 23;60(2):582–589. doi: 10.1016/0006-291x(74)90280-0. [DOI] [PubMed] [Google Scholar]
  26. Shamsuzzaman K. M., Barnsley E. A. The regulation of naphthalene oxygenase in pseudomonads. J Gen Microbiol. 1974 Jul;83(0):165–170. doi: 10.1099/00221287-83-1-165. [DOI] [PubMed] [Google Scholar]
  27. Taira K., Hayase N., Arimura N., Yamashita S., Miyazaki T., Furukawa K. Cloning and nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene from the PCB-degrading strain of Pseudomonas paucimobilis Q1. Biochemistry. 1988 May 31;27(11):3990–3996. doi: 10.1021/bi00411a015. [DOI] [PubMed] [Google Scholar]
  28. Williams P. A., Catterall F. A., Murray K. Metabolism of naphthalene, 2-methylnaphthalene, salicylate, and benzoate by Pseudomonas PG: regulation of tangential pathways. J Bacteriol. 1975 Nov;124(2):679–685. doi: 10.1128/jb.124.2.679-685.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Wittich R. M., Rast H. G., Knackmuss H. J. Degradation of naphthalene-2,6- and naphthalene-1,6-disulfonic acid by a Moraxella sp. Appl Environ Microbiol. 1988 Jul;54(7):1842–1847. doi: 10.1128/aem.54.7.1842-1847.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Yen K. M., Gunsalus I. C. Plasmid gene organization: naphthalene/salicylate oxidation. Proc Natl Acad Sci U S A. 1982 Feb;79(3):874–878. doi: 10.1073/pnas.79.3.874. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Zylstra G. J., Gibson D. T. Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli. J Biol Chem. 1989 Sep 5;264(25):14940–14946. [PubMed] [Google Scholar]
  32. Zürrer D., Cook A. M., Leisinger T. Microbial desulfonation of substituted naphthalenesulfonic acids and benzenesulfonic acids. Appl Environ Microbiol. 1987 Jul;53(7):1459–1463. doi: 10.1128/aem.53.7.1459-1463.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES