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. 1986 Jun 25;14(12):4731–4741. doi: 10.1093/nar/14.12.4731

In vitro transcription of bacteriophage phi 29 DNA. Correlation between in vitro and in vivo promoters.

R P Mellado, I Barthelemy, M Salas
PMCID: PMC311487  PMID: 3088543

Abstract

The phi 29 DNA in vitro transcription initiation sites have been accurately mapped by S1 protection experiments. The results obtained indicated that the B. subtilis RNA polymerase containing the sigma 43 subunit basically recognized the same set of phi 29 promoters in vitro as those used in vivo. In addition, the sequence of the phi 29 early A2a promoter used both in vitro and in vivo has been determined as well as the precise nucleotide where initiation of transcription from the C2 promoter occurs in vitro.

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Selected References

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  1. Davison B. L., Leighton T., Rabinowitz J. C. Purification of Bacillus subtilis RNA polymerase with heparin-agarose. In vitro transcription of phi 29 DNA. J Biol Chem. 1979 Sep 25;254(18):9220–9226. [PubMed] [Google Scholar]
  2. Dobinson K. F., Spiegelman G. B. Nucleotide sequence and transcription of a bacteriophage 29 early promoter. J Biol Chem. 1985 May 25;260(10):5950–5955. [PubMed] [Google Scholar]
  3. Donis-Keller H., Maxam A. M., Gilbert W. Mapping adenines, guanines, and pyrimidines in RNA. Nucleic Acids Res. 1977 Aug;4(8):2527–2538. doi: 10.1093/nar/4.8.2527. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Escarmís C., Salas M. Nucleotide sequence at the termini of the DNA of Bacillus subtilis phage phi 29. Proc Natl Acad Sci U S A. 1981 Mar;78(3):1446–1450. doi: 10.1073/pnas.78.3.1446. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Escarmís C., Salas M. Nucleotide sequence of the early genes 3 and 4 of bacteriophage phi 29. Nucleic Acids Res. 1982 Oct 11;10(19):5785–5798. doi: 10.1093/nar/10.19.5785. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Maxam A. M., Gilbert W. Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 1980;65(1):499–560. doi: 10.1016/s0076-6879(80)65059-9. [DOI] [PubMed] [Google Scholar]
  7. Mellado R. P., Delius H., Klein B., Murray K. Transcription of sea urchin histone genes in Escherichia coli. Nucleic Acids Res. 1981 Aug 25;9(16):3889–3906. doi: 10.1093/nar/9.16.3889. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Mellado R. P., Moreno F., Viñuela E., Salas M., Reilly B. E., Anderson D. L. Genetic analysis of bacteriophage phi 29 of Bacillus subtilis: integration and mapping of reference mutants of two collections. J Virol. 1976 Aug;19(2):495–500. doi: 10.1128/jvi.19.2.495-500.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Murray C. L., Rabinowitz J. C. Nucleotide sequences of transcription and translation initiation regions in Bacillus phage phi 29 early genes. J Biol Chem. 1982 Jan 25;257(2):1053–1062. [PubMed] [Google Scholar]
  10. Salas M. A new mechanism for the initiation of replication of phi 29 and adenovirus DNA: priming by the terminal protein. Curr Top Microbiol Immunol. 1984;109:89–106. doi: 10.1007/978-3-642-69460-8_4. [DOI] [PubMed] [Google Scholar]
  11. Sogo J. M., Inciarte M. R., Corral J., Viñuela E., Salas M. RNA polymerase binding sites and transcription map of the DNA of Bacillus subtilis phage phi29. J Mol Biol. 1979 Feb 5;127(4):411–436. doi: 10.1016/0022-2836(79)90230-4. [DOI] [PubMed] [Google Scholar]
  12. Sogo J. M., Lozano M., Salas M. In vitro transcription of the Bacillus subtilis phage phi 29 DNA by Bacillus subtilis and Escherichia coli RNA polymerases. Nucleic Acids Res. 1984 Feb 24;12(4):1943–1960. doi: 10.1093/nar/12.4.1943. [DOI] [PMC free article] [PubMed] [Google Scholar]

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