Abstract
During development, a polarized epidermal sheet undergoes stratification and differentiation to produce the skin barrier. Through mechanisms that are poorly understood, the process involves actin dynamics, spindle reorientation and Notch signalling. To elucidate how epidermal embryogenesis is governed, we conditionally targeted serum response factor (Srf), a transcription factor that is essential for epidermal differentiation. Unexpectedly, previously ascribed causative defects are not responsible for profoundly perturbed embryonic epidermis. Seeking the mechanism for this, we identified actins and their regulators that were downregulated after ablation. Without Srf, cells exhibit a diminished cortical network and in mitosis, they fail to round up, features we recapitulate with low-dose actin inhibitors in vivo and shRNA-knockdown in vitro. Altered concomitantly are phosphorylated ERM and cortical myosin-IIA, shown in vitro to establish a rigid cortical actomyosin network and elicit critical shape changes. We provide a link between these features and Srf loss, and we show that the process is physiologically relevant in skin, as reflected by defects in spindle orientation, asymmetric cell divisions, stratification and differentiation.
Epidermis is an ideal paradigm for studying how tissue architecture is achieved and how established tissues maintain homeostasis by balancing growth and differentiation. Loss-of-function studies have revealed fundamental roles for adherens junctions and focal adhesions in generating the requisite polarity necessary for embryonic epidermis to stratify and differentiate1,2. Also important in establishing architecture is the orientation of mitotic spindles, which change from lateral to perpendicular orientations concomitant with stratification3.
Several lines of mostly in vitro evidence indicate that the cortical cytoskeleton participates in structurally organizing and positioning mitotic spindles4,5. As cells go through mitosis, they alter their geometry, a process involving massive actin remodelling and redistribution of cortical proteins6–10. In Caenorhabditis elegans zygotes, reorganization of cortical actomyosin on sperm entry establishes polarity that guides spindle orientation11–14. In fertilized mouse oocytes, cortical tension affects spindle structure and rotation15. Relations between the molecular composition of cortex, cell shape and spindle orientation have not been studied in the context of a complex tissue such as mouse epidermis, where spindle orientation is critical to achieve tissue form and function.
We were intrigued by studies in which Srf, a ubiquitous transcription factor, was conditionally targeted in the epidermis, yielding an imbalance in proliferation and differentiation16,17. These defects have been attributed to various processes, including enhanced inflammation17 and/or disrupted cell–cell adhesion16. In cultured keratinocytes, Srf activates Fos and Junb to promote terminal differentiation in vitro18. That said, Srf regulates many genes, including regulators of actin cytoskeleton, adhesion and contractility19,20. Moreover, in vivo studies of muscles21,22, forebrain23, endothelium24 and metastasis25 emphasize roles for Srf in contractility, migration and adhesion. With increasing evidence that actin dynamics function in epidermal stratification and differentiation, it seemed important to explore whether Srf has additional roles in regulating tissue development. In the present study, we show that when Srf is missing during epidermal morphogenesis, defects in actin dynamics precede the myriad of other alterations attributable to Srf loss. In pursuing the physiological relevance, we discovered that when normal epidermal cells enter mitosis, they reinforce their actomyosin cortical network, but soon after Srf ablation, this process is disabled. We show that this mechanism is critical for mitotic basal cells to adopt necessary shape changes to properly localize leucine–glycine–asparagine repeat-enriched protein (LGN) and nuclear mitotic apparatus protein (NuMA) and reorient their spindle, so that stratification and differentiation can be achieved. The ability of Srf to orchestrate this process unveils a previously unknown role for this broadly expressed transcription factor.
RESULTS
Srf-deficiency alters the basal to suprabasal transition
Conditional targeting of Srf was achieved by breeding Srf fl/fl mice21 to mice expressing Keratin(K)-14 promoter-driven Cre recombinase26. Nuclear Srf protein was uniformly lost by embryonic day 16.5 (E16.5; Fig. 1a). Mice conditionally null for Srf (cKO) died within 24 h. Newborn cKO animals were runted, and exhibited open eyes, as reported previously16.
Heterozygous or wild-type E16.5 epidermis consists of an inner layer of polarized basal cells overlaid by differentiating, keratin-rich spinous cells, granular cells and surface stratum corneum (Fig. 1b). In contrast, Srf-deficient basal cells were often located between basal and spinous layers or within the spinous layer (Fig. 1b). As development proceeded, cellular organization became increasingly perturbed (Fig. 1b and Supplementary Fig. S1).
Differentiation and proliferation defects emerge subsequent to morphological changes, but before inflammation
The basal to spinous differentiation switch in wild-type epidermis is accompanied by repression of basal keratins K14/K5 and induction of spinous keratins K1/K10 (ref. 27), whereas suprabasal activation of K6/K16 typically reflects an imbalance in normal homeostasis28. In Srf-cKO epidermis, keratin expression was markedly perturbed. This was most obvious from E17.5 onward, where K5/K14 extended suprabasally and K6/K16 replaced K1/K10 in most spinous cells (Fig. 2a–c). Immunoblot analyses confirmed these alterations (Fig. 2d), providing an ~1 day delay in the molecular explanation for the blurred ultrastructural basal to spinous layer distinction.
Differentiation depends on Notch signalling, which leads to suprabasal activation of downstream target genes, such as Hes1 (refs 29–33). Immunolocalization for Notch receptor and nuclear Hes1 was normal at E16.5, but by E17.5, both Notch and Hes1 were repressed in Srf-cKO when compared with wild-type epidermis (Fig. 2e,f). These aberrations occurred concurrently with biochemical changes, but subsequent to Srf-deficiency and morphological anomalies. At E17.5, increases in actively cycling cells were also detected. Notably, this timing coincided with K14+ cell expansion and repressed differentiation. Differences in cycling cells were most evident suprabasally and seemed to be counterbalanced by elevated apoptosis (Supplementary Fig. S2).
Proliferation and differentiation imbalances were also noted in adult animals exhibiting spontaneous Srf ablation. In that case, defects were traced to accompanying inflammation17. In contrast, even though skins from K14–Cre newborn Srf-cKO pups exhibited an ~4× increase in CD45-positive immune cells and ~9× increase in Mac1-positive macrophages, immune infiltration was not detected at E16.5–E17.5 (Supplementary Fig. S3). Hence, embryonic differentiation defects elicited by Srf deficiency were not attributable to inflammation.
Srf-mediated perturbations in adhesion and apicobasal polarity emerge subsequent to morphological changes
Alterations in differentiation, hyperproliferation and apoptosis were reported in severely affected newborn mice lacking Srf. In that case and in adults, loss of cell adhesion was thought to be a major contributing factor16,17. However, embryonic Srf-cKO epidermis still had E-cadherin at its (irregular) intercellular borders (Fig. 3a). By birth, E-cadherin levels were actually elevated (Fig. 3a,b). Similar results were obtained for other core components of adherens junctions and desmosomal–keratin networks (Supplementary Fig. S4). In addition, despite some suprabasal localization, cell–substratum components seemed largely unperturbed.
Ultrastructurally, intercellular membranes were sealed and both hemidesmosomes and desmosomes and their keratin filament connections seemed to be intact in Srf-deficient embryonic skin. Even at birth, the basal layer of Srf-cKO and wild-type pups exhibited similar lengths of membrane occupied by hemidesmosomes (0.35 ± 0.05 wild type, 0.32 ± 0.02 cKO). The membrane length occupied by desmosomes was actually elevated in Srf-deficient cells (0.044±0.003 wild type, 0.09±0.01 cKO; Fig. 3c,d), although individual desmosome size was not affected (0.24±0.05 μm wild type, 0.24±0.01 μm cKO). Surprisingly, cell adhesion was not disrupted even in places where the morphology of newborn epidermis was grossly altered and many cells were filled with large vacuoles (Supplementary Fig. S1). On the basis of these findings, we conclude that early Srf loss does not cripple embryonic epidermal adhesion.
Although not sufficient for establishing apicobasal polarity (ABP), intercellular and cell–substratum adhesion are prerequisites. At E16.5, two key ABP features were properly localized apically in Srf-deficient skin: Par3 and centrosomes3 (Fig. 3e,f). By E17.5, concomitant signs of altered ABP and terminal differentiation were apparent. By E18.5, polarity was grossly disturbed. Overall, ABP perturbations appeared ~1 day following Srf loss and morphological irregularities. We revisit the sequential appearance of these events later.
Srf-deficiency in skin embryogenesis leads to early transcriptional changes involving predominantly, but not exclusively, actin regulators
To gain insights into the early morphological abnormalities that accompany Srf loss, we turned to transcriptional profiling. We made K14–Cre × Srf(fl/fl) × Rosa26–fl–stop–fl–YFP mice and used fluorescence activated cell sorting (FACS) to purify Cre-activated basal cells (YFP+ α6-integrin+) from control and cKO E16.5 embryos (Supplementary Fig. S5a). These populations were then used for microarray analyses, which were then validated by real-time PCR (Fig. 4a; Table 1 and Supplementary Fig. S5b).
Table 1.
Actomyosin | Fblim1(−3.7)* Cnn2(−3.1)* Actb(−2.0)* Flna(−1.8)* Arhgap24(−1.8)* Actg1(−1.7)* Wdr1(−1.6)* Pfn2(−1.3)* Gsn(−1.3)* |
cytoskeleton | Myh9† Myh10† Myh14† Myl9† |
Cell adhesion | Gjb5(−2.6)* Pcad20(−2.2)* Dsg1b(−1.8)* Tns4(−1.6)* Cdh1† Ctnna1† Ctnnb1† Tjp1† Tjp2† Ocln† Itgb1† |
Immediate early genes |
Egr2(−8.6)* Egr1(−5.0)* Egr3(−3.9)* Fos† Junb† |
Immune response |
Il1b† Il6† Il18† Ccl2† Ccl27a† S100a8† S100a9† |
Cell cycle | Mki67† Ccna1† Ccna2† Ccnb1† Ccnb2† Ccnd1† Ccnd2(1.5)‡ Ccnd3† Ccne1† Ccne2† |
Notch signalling | Notch1† Notch2† Notch3† Jag1† Jag2 † Dll1† |
Apico-basal | Pard3† Pard3b† Pard6a† Pard6b† Pard6g † Prkcc† Prkcz† |
polarity |
Embryos were from K14–Cre×Rosa26YFP fl/fl ×Srf fl/fl (wild-type and cKO littermates). Basal cells active for Cre recombinase expressed YFP and were enriched for surface α6-integrin. After FACS purification, mRNAs were subjected in duplicate for microarray analyses. Data from two independent arrays revealed 72 mRNAs that scored as up- or downregulated by at least 1.5-fold with P <0.05. DAVID clustering analyses showed that the affected process is the actomyosin cytoskeleton, whereas ABP, Notch, cell cycle regulators and pro-inflammation associated genes showed no change at this early time.
Decrease in early (E16.5) mRNA expression
No change in early (E16.5) mRNA expression
Increase in early (E16.5) mRNA expression
At these early times after Srf targeting, only 72 messenger RNAs scored as down-(49) or up-(23) regulated >1.5 fold (P value < 0.05; Supplementary Tables S1 and S2). As revealed by the functional annotation-clustering algorithm ‘DAVID’34, downregulated genes were clustered into ‘actomyosin cytoskeleton’ (P value=2.2×10−4; Table 1). These included fundamental F-actin building blocks (β, γ-actin; Actb, Actg1; refs 20,35); an F-actin stabilizer (H2-calponin, Cnn2; refs 36–38); F-actin crosslinkers (FilaminA, Flna; Filamin-binding LIM protein 1, Fblim1; ref. 39) and an actin-interacting protein 1 (Wdr1) that can influence severing activity and mediate cell shape changes associated with mitosis in vitro40. Other actin regulators Gelsolin (Gsn) and Profilin 2 (Pfn2), which regulate severing/capping and polymerization, respectively, were also downregulated, albeit with a lower-fold change.
Despite the absence of overt differences in cellular junctions, early Srf-mediated changes included intercellular adhesion/signalling genes (Dsg1a, Dsg1b, Gjb5, Pcdh20), and a cell–substratum gene (Tns4). In contrast, transcripts associated with Notch signalling and other transcriptional regulators of epidermal differentiation seemed unaffected by early loss of Srf, as did genes involving ABP and inflammation (Table 1 and Supplementary Fig. S5b).
The highest-fold changes were in established Srf targets Egr1-3, which encode transcription factors that function as tumour suppressors in many tissues, including skin41. However, E16.5 SRF-deficient epidermis was not hyperproliferative, and only one cell-cycle-regulatory gene, Ccnd2, was upregulated in our array. Moreover, Nab2, a known target of Egr1-3 (ref. 42), was unchanged and Gadd45a/b, which are positively regulated by Egr1 in epidermis42–44, were not downregulated in E16.5 Srf -null basal cells (Table 1 and Supplementary Fig. S5b). Thus, consequences of Egr downregulation seemed to arise subsequent to E16.5, similarly to enhanced proliferation (Supplementary Fig. S2).
Finally, neither Fos nor Junb showed appreciable change in our E16.5 array and quantitative PCR (qPCR; Supplementary Fig. S5b). Thus, although these genes are well known Srf targets and they function critically in regulating keratinocyte differentiation in vitro18, they did not seem to contribute substantially to the earliest morphological changes arising in Srf-deficient skin.
Srf-mediated alterations in cortical actin occur early and result in a failure of mitotic cells to round up
Collectively, these data pointed to alterations in actomyosin cytoskeletal genes as the source of basal to spinous defects in Srf -null E16.5 embryos. Indeed, although cortical actin cytoskeleton was still present, its intensity was diminished to 45±11% of wild-type basal cell levels (Fig. 4b,c). This defect was accentuated with age, showing nearly complete loss of cortical actin by E18.5 (Supplementary Fig. S6).
In vitro studies show that the actin cytoskeleton is remodelled when cells enter and progress through mitosis; this process is thought to allow cells to round up and generate cortical actomyosin tension to facilitate division4,10,45. To test whether embryonic basal cells round up in mitosis and whether this is compromised on Srf ablation, we imaged cells through the plane of the E16.5 basal layer (Fig. 4d). We used a higher exposure to illuminate the otherwise reduced cortical actin network, so we could quantify cell shapes in cKO tissue. Although some heterogeneity existed, the average axial ratio of wild-type basal cells went from 1.59±0.06 in interphase to 1.10±0.01 in early mitosis. This ratio was largely unchanged in cKO basal cells (1.51±0.05, interphase versus 1.40±0.08, mitosis; Fig. 4e), reflecting an inability to undergo proper shape changes during mitosis.
Wild-type embryos exposed to actin inhibitors phenocopy the failure of Srf -null basal cells to undergo shape changes during mitosis
To test whether actin perturbations account for the observed phenotypic changes seen in Srf-cKO E16.5 embryos, we treated wild-type embryos with latrunculin, which specifically inhibits actin polymerization46,47. To mimic early stages of Srf loss, we first showed that after mild exposure of wild-type E14.5 embryos to latrunculin (0.25 μM), ABP was still intact, and cortical actin was only reduced, not abolished (Fig. 4f–h). This treatment seemed to impair rounding of mitotic basal cells more than it affects interphase cell shape (Fig. 4i,j). Our findings on embryos agree with previous reports that PtK2 cells fail to round up during mitosis following exposure to actin inhibitors10. We will return to this issue later.
Srf-cKO early mitotic cells fail to activate ERM proteins and recruit myosin-IIA to their cortices
Thus far, our studies pointed to a sensitivity of mitotic basal cells to Srf loss and to its accompanying diminution of cortical actin. Recent in vitro studies showed that the single Drosophila ERM (Ezrin–Radixin–Moesin) protein undergoes phosphorylation during mitosis6,7. This event is thought to trigger cell rounding, cortical stiffening and myosin-II recruitment required to progress through cell division. In light of our findings, we examined whether this mechanism is operative in E16.5 mouse epidermis, and whether it is compromised as an early consequence of Srf ablation.
Immunofluorescence microscopy revealed an enrichment of ERM proteins at intercellular borders of wild-type, but not Srf -null, basal cells (Fig. 5a). Moreover, whereas early mitotic cells of wild-type epidermis exhibited strong phospho-ERM immunolabelling at the cortex, Srf -null counterparts showed weaker and discontinuous labelling (Fig. 5b,c). Consistent with our array and qPCR data, immunoblot analyses revealed similar ERM levels, but reduced phosphorylated ERM in cKO versus wild-type P0 epidermis (Fig. 5d). This difference seemed to result from Srf-mediated alterations in cortical actin, because exposing embryos to low latrunculin reduced numbers of mitotic cells with enriched cortical phosphorylated ERM (Fig. 5e).
Planar imaging of E16.5 wild-type embryos also revealed enhanced myosin-IIA at the cortex of rounded, mitotic cells (Fig. 5f). Similarly to phospho-ERM, this enrichment was abolished in Srf-cKO epidermis, along with shape changes that typically accompany mitotic cells. These differences were not attributable to the particular imaging plane, as verified by merging collective Z -stack images of mitotic basal cells (insets).
Quantifications of fluorescence intensity ratios of both wild-type and Srf-cKO skins showed that cortical F-actin intensities were comparable between mitotic cells and their non-mitotic neighbours (Fig. 5g). In contrast to wild-type cells, however, the >3-fold enrichment of myosin-IIA intensity at the mitotic cortex did not occur in Srf -null cells (Fig. 5g). Similar to our observations with ERM, overall levels of myosin mRNAs and proteins were not affected by early Srf loss (Fig. 5h and Supplementary Fig. S5b). Moreover, as observed in moesin-depleted cells6,7, myosin-IIA was readily detectable at the midzone of late mitotic cells, and binucleated cells were not detected (Supplementary Fig. S7). Thus, the defect seemed to be primarily in myosin-IIA cortical recruitment, rather than cleavage furrow recruitment. Similar to Srf loss, latrunculin resulted in discontinuous and diminished myosin-IIA at the mitotic cortex (Fig. 5i,j).
Srf-mediated changes in actin-related proteins are sufficient to account for the failure to activate ERM proteins, recruit myosin-IIA and undergo mitotic cell shape changes
To explore Srf-mediated regulation of actin genes further, we tested the effects of knocking down their mRNAs on mitotic shape. When plated on collagen/fibronectin-coated coverslips for 18 h, wild-type keratinocytes formed a nearly confluent monolayer, which then assembled into an adherent sheet on calcium elevation. Nocodazole exposure arrested mitotic keratinocytes for image analyses (Fig. 6a, left).
With this in vitro system, we first documented a recapitulation of our low-latrunculin in vivo phenotype. Mitotic stage was identified by chromatin structure (4,6-diamidino-2-phenylindole, DAPI), and cell shape was delineated by cortical phospho-ERM and F-actin (phalloidin; Fig. 6a). In contrast to control (dimethylsulphoxide, DMSO)-treated cultures, 0.25 μM latrunculin perturbed the cortical distribution of pERM proteins and myosin-IIA in mitotic cells (Fig. 6a). Although total cell area was not affected, axial ratio quantifications indicated that latrunculin-treated mitotic cells failed to round up (1.26±0.23, DMSO versus 1.47±0.37, latrunculin; Fig. 6a–c).
Next, focusing on β-actin and Wdr1, we identified suitable shRNAs that when compared with scramble shRNA controls, diminished mRNA and protein levels (Fig. 6d,e). Phenotypically, mitotic keratinocytes expressing scramble shRNAs were indistinguishable from their uninfected or DMSO-treated counterparts (Fig. 6f).
Mitotic cells expressing Actb shRNAs failed to round up, and exhibited diminished cortical actin (Fig. 6f–j). Most importantly, although phospho-ERM cortical intensity remained high, its distribution was uneven and myosin-IIA cortical recruitment was affected. Mitotic keratinocytes expressing Wdr1 shRNAs also failed to round up40, but in contrast to the Actb shRNA, cortical phospho-ERM was significantly reduced (Fig. 6f,h). Wdr1-deficient keratinocytes were flat, precluding quantification of F-actin and myosin-IIA levels; however, they did not exhibit the typical cortical enrichment of these proteins.
Together, these findings indicate that both β-actin and Wdr1 contribute to the ability of mitotic keratinocytes to round up. A decrease in β-actin affected pERM distribution, and alterations in Wdr1 altered ERM phosphorylation (activation). Downstream to ERM activation, myosin-IIA recruitment was sensitive to the knockdown of either mRNA. Although beyond the scope of the present study, these data underscore the relevance of our array data, and indicate that multiple Srf-regulated genes may collaborate to govern the cortical actomyosin dynamics necessary to undergo proper basal cell divisions in developing epidermis.
ERM phosphorylation and mitotic cell shape changes function in spindle orientation and asymmetric cell divisions
In Drosophila cells, the failure to undergo ERM-actomyosin-induced cortical shape changes during mitosis results in structurally abnormal spindles with unstable localization6,7. Although spindles seemed largely intact within E16.5 Srf-deficient epidermis, their orientation was grossly perturbed (Fig. 7a,b). In contrast to basal divisions in wild-type embryos where >70% were perpendicular to the underlying basement membrane3, <20% of divisions were perpendicular in Srf-cKO skin. Moreover, whereas <5% of wild-type basal cells divided at an oblique angle, ~50% of dividing Srf -deficient cells exhibited intermediate spindle angles.
Perpendicularly oriented spindles in stratifying embryonic epidermis are accompanied by an apical crescent of cortical LGN and NuMA (ref. 3). These proteins are thought to connect astral microtubules of one spindle pole to the apical cortex48–52. Srf loss did not alter Gpsm2 (LGN) or NuMA1 (NuMA) mRNA levels, nor did it affect the percentage of LGN+ cells (Fig. 7c,d). However, the orientation of the LGN–NuMA cortical crescent was randomized in Srf-deficient mitotic cells (Fig. 7e,f).
We used double-immunofluorescence microscopy to position LGN–NuMA and spindle orientation in the cascade of events that follow Srf deficiency. When apical positioning of the Par3 complex is compromised with mutants that affect adhesion, spindle orientations become random3. In Srf-deficient skin, however, randomization of LGN–NuMA and spindle orientation preceded perturbations in Par3 and centrosomal positioning (Fig. 7g,h).
As expected, LGN+ wild-type basal cells were also phospho-ERM+. However, both were perturbed in Srf-deficient E16.5 basal cells, concurrent with reduction in myosin-IIA enrichment (Fig. 7g). Finally, LGN and spindle orientation defects occurred in embryos treated with either of two drugs that affect actin dynamics, latrunculin and jasplakinolide53, at doses and times that did not affect Par3 or centrosome positioning. Blebistatin, an inhibitor of myosin-II motor activity54, also perturbed LGN distribution (Supplementary Fig. S8). Together these results place LGN–NuMA and spindle orientation as early events that accompany inabilities of mitotic cells to round up, activate ERM proteins and recruit myosin-IIA to their cortices (Fig. 7i).
DISCUSSION
In vitro studies show that as cells enter mitosis, they round in shape and stiffen their cortex4,45, processes involving massive actin remodelling10. In Drosophila, the trigger is ERM phosphorylation, which reorganizes and links cortical actin fibres to plasma membrane, thereby facilitating myosin-II recruitment and achieving spherical morphology and tension necessary for cell division6,7. We have discovered that when basal epidermal cells in normal mouse embryos enter mitosis, they activate ERM proteins, triple myosin-IIA at their cortex and round up. In contrast, their Srf -null counterparts cannot generate a cortical platform compatible for ERM protein activation and myosin-IIA recruitment. Consequently, Srf -null cells fail to undergo shape changes that normally accompany these mitotic events. Our results now implicate Srf, and in so doing, we take these observations up the evolutionary kingdom and to an in vivo level.
Although Srf can regulate Myh9 (Myosin-IIA) transcription25, E16.5 Srf-deficient skin showed alterations primarily in actin regulators. Our actin-inhibitor and knockdown studies revealed the importance of these changes to actomyosin dynamics. Thus, our results best fit a model whereby Srf governs the transcriptional program that establishes cortical framework. Early mitosis-inducing post-translational modifications then function to reinforce the cortex and remodel cellular shape. These mechanisms have not been described before in epidermal development or homeostasis, nor has a role for Srf been found for cortical changes in ERM and myosin dynamics in mitotic cells of any tissue.
In culture, the biological significance of actomyosin perturbations is underscored by spindle defects and abnormal divisions that occur when cells fail to achieve proper shape, cortical organization and tension4,6,7,9,45. Importantly, in ERM-depleted cells, spindle structural defects are corrected when cortical stiffness is restored from the extracellular side7, and spindle orientations are restored when unregulated contractility is suppressed6. During early cytokinesis, myosin-II responds to and ‘corrects’ shape deformations before completing cytokinesis55.
It is tempting to speculate that at the embryo surface, enriching myosin-IIA at the mitotic cortex might serve as a mechanical buffer to protect spindle from undesirable cell-shape distortions. Mechanistically, we show that cortical actomyosin-derived signals are essential not only for remodelling epidermal shape during mitosis, but also for spindle orientation. Furthermore, randomized spindle orientations arising after Srf targeting or actomyosin inhibitors highlights their acute sensitivity to changes in cortical actomyosin that influences cell shape. Whereas our studies show that Srf drives basal cell shape changes in vivo, it is intriguing that in vitro, it is the shape changes—from stretched and flattened to rounded—that induce Srf (ref. 18).
Our data indicate that cell shape, ERM protein activation and myosin-IIA cortical recruitment are critical for properly orientating the LGN–NuMA complex in mitotic keratinocytes. In lower eukaryotes, redistribution of myosin-II and cortical tension promote proper spindle orientation and asymmetric division56–58, and recently, LGN/Pins (partner of inscuteable) was found to regulate myosin-II cortical distribution56. Interestingly, in these systems, cortical myosin-II was polarized, whereas in embryonic keratinocytes, myosin-IIA was distributed throughout cortex. Further explorations into how actomyosin dynamics function in asymmetric divisions should provide clues for the basis of these differences.
Spindle orientation and asymmetric inheritance have emerged as pivotal mechanisms that allow stem cells to balance self-renewal and differentiation in a directional manner49,57. Both Srf and the actomyosin cytoskeleton are sensitive to numerous cues that vary from chemical to mechanical19,20,59,60. Our observations indicate that these signals can be integrated through Srf and cortical actomyosin to regulate spindle orientation, asymmetric cell division, cell fate determination and differentiation. The mechanisms that we have revealed demonstrate a role for Srf in regulating these fundamental biological processes, and new insights into how epidermal divisions and tissue morphogenesis are achieved.
METHODS
Methods and any associated references are available in the online version of the paper at http://www.nature.com/naturecellbiology/
METHODS
Mouse lines and breeding
B6/129S6 Srftm1Rmn/J mice21 were crossed to CD1 transgenic mice expressing Cre recombinase under the control of the human keratin 14 promoter26 to generate Srf(fl/+)×K14–Cre animals. B6/129S6 Srftm1Rmn/J mice were also crossed to ROSA26 fl–Stop–fl–YFP animals61 to generate a double-homozygous line. The two lines were crossed to generate Srf-cKO , ROSA–YFP mice. Srf(fl/+), K14–Cre and Srf(+/+),K14-Cre mice are referred to as wild type, as they were indistinguishable by the assays carried out.
Immunodetection and antibodies
Primary antibodies used were: Srf (1:500, Santa-Cruz), MIIA (1:500, Covance), E-cadherin (1:200, ECCD-1, M. Takeichi), CD104 (1:200, 4-integrin, BD-Pharmigen), P-cadherin (1:100, Pcad, Zymed), Desmoplakin (1:300, Research Diagnostics), K14 (1:500, Fuchs Lab), K10 (1:500, Fuchs Lab), K6 (1:500, Fuchs Lab), Ki67 (1:500 Novocastra), cleaved Caspase 3 (1:200, Cell Signaling), β- and α-catenin (1:200, Sigma), β-actin (1:5,000, Sigma), Vinculin (1:200, Sigma), MHC (1:1,000, Sigma), MLC (1:1,000, Sigma), HPRT (1:2,000, Abcam) PAR3 (1:200, Millipore), PC (1:500, Covance), Notch3 (1:200, Biologend), Hes1 (1:200, Fuchs Lab), pHH3 (1:500, Upstate), LGN (1:500, Fuchs Lab), NuMA (1:200, Cell Signaling), Ac-Tub (1:300, Sigma), CD3 (1:200 Chemicon), CD45 (1:200, BD-Pharmigen), Mac1 (1:200, BD-Pharmigen), BrdU (1:300, Abcam) ERM (1:200, Cell Signalling) and pERM (1:100, Cell Signalling). Secondary antibodies (1:500) were conjugated to fluorescein isothiocyanate (FITC) or Texas red (The Jackson Labs) or biotin (Vector Labs). F-actin was labelled with Phalloidin-Alexa Fluor 546 (1:1,000, Invitrogen).
For tissue analyses, skins were frozen and embedded in optimal cutting temperature (OCT) compound or fixed overnight with buffered 4% formaldehyde at 4°C and embedded in paraffin. For immunoreactions, skin sections (10 μM) were blocked with PBS, 0.3% Triton X-100, 1% bovine serum albumin, 5% normal goat serum, 5% normal donkey serum or MOM Basic kit (Vector Labs). Primary antibodies were incubated for 1 h at room temperature or overnight at 4°C. Secondary antibodies were incubated at room temperature for 1 h. For whole-mount immunofluorescence microscopy, embryos were fixed for 1 h in 4% formaldehyde, and primary antibodies were incubated overnight at 4°C.
For immunoblots, skins were incubated in dispase for 12 h at 4°C, to selectively remove the epidermis, which was then frozen in liquid nitrogen and crushed. For immunoblot analyses, proteins were extracted and processed as described62. Samples were run on 4–12% gradient gels, transferred to nitrocellulose, and blotted overnight with the indicated antibodies.
Microscopy and image processing
Whole-mount images were acquired with a Zeiss LSM510 laser-scanning microscope (Carl Zeiss MicroImaging) through a ×100/1.4 oil objective. Images were recorded at 1,024× 1,024 square pixels. OCT immunofluorescence section images (10 μm) were acquired with a DeltaVision-RT system (Applied Precision), consisting of an inverted microscope IX71 equipped with ×60/1.42 oil or ×20/0.75 air objectives (Olympus). Red–green–blue images were assembled in Adobe Photoshop CS2 v. 9.0.2 and panels were labelled in Adobe Illustrator CS2 v. 12.0.1.
Electron microscopy
For transmission electron microscopy, samples were fixed in 2% glutaraldehyde, 4% paraformaldehyde and 2 mM CaCl2 in 0.05 M sodium cacodylate buffer, at pH 7.2, at room temperature for >1 h. Samples were post-fixed in 1% osmium tetroxide and processed for Epon embedding. Ultrathin sections (60–70 nm) were counterstained with uranyl acetate and lead citrate. Electron micrographs were taken with a transmission electron microscope (Tecnai G2-12; FEI) equipped with a digital camera (Model XR60; Advanced Microscopy Techniques).
FACS
FACS purification of basal epidermal cells from E16.5 Srf fl/fl ROSA26 YFP fl/fl K14–Cre (cKO) or Srf fl/+ROSA26 YFP fl/fl K14–Cre (wild type) mice was carried out on a FACS Vantage SE system equipped with FACS DiVa software (BD Biosciences). Cells were gated for single events and viability and then sorted according to phycoerythrin-conjugated α6-integrin expression and YFP fluorescence.
Microarray analysis
FACS-purified basal cells from the epidermis of wild-type and Srf-cKO E16.5 embryos were given to the MSKCC Genomics Core Facility for RNA extraction, quality control, quantification, reverse transcription, labelling, and hybridization to MOE430A 2.0 microarray chips (Affymetrix). Arrays were hybridized as per the manufacturer’s specifications to Affymetrix MOE430v2 chips. Images were subtracted for background signals, and probe-set expression estimates were generated using the MAS5 algorithm implemented in the Bioconductor open software developed for computational biology and bioinformatics. A detection P value of P ≤0.05 was used to set the threshold of probe sets into present (P <0.05) or absent (P >0.05). Probe sets were identified as differentially expressed when the absolute fold change was >1.5, and the probe set was present in both samples of the relatively overexpressed group. Probe sets selected for visualization were log2 transformed and normalized to the replicate mean (estimated from basal cells). Intensity bias between the two replicates (provided to the Genomics Core Facility, MSKCC for quality control) necessitated this within replicate normalization, which leaves the data for each gene centred around zero in the basal cells.
Database accession number
Raw and normalized microarray expression data have been deposited at the Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/) under the accession number GSE 25548.
Semi-quantitative RT–PCR
Equal amounts of RNAs were added to a reverse-transcriptase reaction mix (SuperScripy VILO, Invitrogen), and semi-quantitative PCR was conducted with a LightCycler system (Roche Diagnostics). Reactions were carried out using the indicated primers and template mixed with the LightCycle DNA master SYBR Green kit and run for 50 cycles. Specificity of the reactions was determined by subsequent melting curve analysis. LightCycle analysis software was used to remove background fluorescence (noise band). The number of cycles needed to reach the crossing point for each sample was used to calculate the amount of each product using the 2–CP method. Levels of PCR product were expressed as a function of peptidylprolyl isomerase D (ppid) and/or HPRT. Sequences of primers are listed in Supplementary Table S3.
Actomyosin-inhibitor treatments
E14.5 CD1 embryos were incubated with the specified concentrations of latrunculin B, Jasplakinolide, blebbistatin or DMSO (Sigma) in epidermal differentiation medium (15% fetal bovine serum, DMEM/HamsF-12 medium, 1.5 mM Ca2+) at 37°C for 1 h before embedding in OCT and processing for immunofluorescence microscopy as described above.
Asymmetric cell division quantifications
Asymmetric cell division quantification was described previously3. Briefly, 10 μm frozen sections of E16.5 embryos were stained with DAPI to label chromatin and identify mitotic basal cells in anaphase/telophase. Following immunofluorscence processing and imaging, the angle between the basement membrane and the daughter chromatin of each anaphase basal cell was then measured. Additional sections were stained for phosphorylated histone H3 (pHH3), to mark mitotic cells, and LGN, to mark the cortical crescent that marks the orientation of one of the two spindle poles in a classical asymmetric cell division. Basal-layer early mitotic cells were first identified according to their pHH3 staining, after which their localization of LGN was determined. For these measurements, cells from three wild-type and three cKO embryos were analysed.
pHH3 quantification
Sections (10 μm) of E16.5, E17.5 and E18.5 embryos were immunostained with pHH3 and co-labelled with DAPI. The ratio between pHH3 positive cells and number of basal cells (DAPI positive) was calculated in at least ten different random fields per embryo along the back skin. For these measurements, cells from three wild-type and three cKO embryos were analysed.
Whole-mount myosin-IIA and F-actin fluorescence intensity quantifications and axial ratio calculations
Fluorescence intensity was measured in ten places along the cortex of mitotic cell and ten places in neighbouring non-mitotic cells using ImageJ software. The ratio between average intensities of mitotic versus non-mitotic cell was calculated. The raw data for these measurements were a single confocal microscopy section (0.5 μm) in the middle of the mitotic cell. The same source of data was used for axial ratio calculations, using the ‘fit elipse’ tool in ImageJ. For these measurements, cells from three wild-type embryos and three cKO embryos were analysed.
Immune cell quantifications
Sections (10 μm) of E16.5, E17.5 and newborn mice were immunostained with mac1, CD45 and CD3 antibodies to identify different populations of immune cells. The numbers of positive cells in the epidermis and the dermis were counted per microscopic field (×40). For these measurements, cells from three wild-type and three cKO embryos were analysed.
pERM quantification
Sections (10 μm) of E16.5 were co-labelled for LGN and pERM. Those LGN-positive cells that exhibited a continuous cortical pERM staining that was significantly brighter than neighbouring non-mitotic cells were scored as positive in our quantifications. For these measurements, cells from three wild-type and three cKO embryos were analysed.
Tissue culture, shRNA constructs and lentiviral infection
Lentiviral shRNAs (actb, wdr1) were from the TRC-1 Library (Sigma). Production of shRNA lentivirus was as described previously63. Epidermal keratinocytes were isolated and cultured from dispase-treated skins of wild-type CD1 mice. After replating 1 × 105 cells in a single well of a 6-well plate, cells were infected with >109 colony-forming units (c.f.u.) of lentivirus (scramble control or actb and wdr1 shRNAs) in the presence of 100 μl polybrene. At 24 h after infection, cells were selected with 1 μg ml−1 puromycin (Sigma), and were plated on collagen/fibronectin-coated coverslips (75,000 cells in a single well of a 24-well plate). Eighteen hours later, cells reached ~80% confluency and were switched to differentiation media (15% fetal bovine serum, DMEM/HamsF-12 medium and 1.5 mM Ca2+) supplemented with 1 μM ml−1 nocodazole (Sigma). For latrunculin experiments, the drug dissolved in DMSO was added 30 min before switching to high-calcium media and cultures were then fixed after 3 h. For knockdown experiments, cells were switched for 6 h and then fixed. Quantitative immunofluorescence data were collected from at least two independent experiments, in which at least 50 cells were measured per quantification using a Zeiss LSM510 laser-scanning microscope (Carl Zeiss MicroImaging) and analysed by ImageJ.
Below is information regarding TRC library shRNA constructs. (1) Actb, clone name: NM_007393. 1-1652s1c1 target sequence: 5′-GCATTGCTTCTGTGTAAATTA-3′; oligonucleotide sequence: 5′-CCGGGCATTGCTTCTGTGTAAATTACTCGAGTAATTTACACAGAAGCAATGCTTTTTG-3′. (2) Actb, clone name: NM_007393. 1-440s1c1 target sequence: 5′-CCAGATCATGTTTGAGACCTT-3′; oligonucleotide sequence: 5′-CCGGCCAGATCATGTTTGAGACCTTCTCGAGAAGGTCTCAAACATGATCTGGTTTTTG-3′. (3) Wdr1 clone name: NM_011715. 1-1622s1c1 target sequence: 5′-GATGGCTATTCGGAGAATAAT-3′; oligonucleotide sequence: 5′-CCGGGATGGCTATTCGGAGAATAATCTCGAGATTATTCTCCGAATAGCCATCTTTTTG-3′. (4) Wdr1 clone name: NM_011715. 1-368s1c1 target sequence: 5′-GCTGGGAAGATCAAGGACATT-3′; oligonucleotide sequence: 5′-CCGGGCTGGGAAGATCAAGGACATTCTCGAGAATGTCCTTGATCTTCCCAGCTTTTTG-3′.
Statistics
For all quantified data, mean ± one standard deviation was presented. To determine significance between two groups, indicated in figures by an asterisk, comparisons were made using Student’s t -test. For all statistical tests, the 0.05 level of confidence was accepted for statistical significance.
Supplementary Material
ACKNOWLEDGEMENTS
We thank the RU Facilities for Bioimaging (A. North) and FACS (S. Mazel) staff for their technical support; we thank N. Stokes for her assistance in the mouse facility and the Comparative Biology Center (CBC) staff for their help in veterinary care and health of our mice. We are grateful to E. Ezratty, S. Beronja, A. R. Folgueras, M. Nikolova and other members of the Fuchs laboratory for helpful discussions, critical reading of the manuscript and experimental assistance. C.L. is a Tri-Institutional Starr Stem Cell Scholars Posdoctoral Fellow. S.E.W. is an American Cancer Society Postdoctoral Fellow. Work in the Fuchs laboratory was supported by a grant from the National Institutes of Health (E.F. R01AR27883).
Footnotes
Note: Supplementary Information is available on the Nature Cell Biology website
AUTHOR CONTRIBUTIONS C.L. and H.A.P. carried out the experiments and analysed the raw data. S.E.W. contributed reagents and experimental suggestions. C.L. and E.F. wrote the manuscript. E.F. supervised the project.
COMPETING FINANCIAL INTERESTS The authors declare no competing financial interests.
Reprints and permissions information is available online at http://npg.nature.com/reprintsandpermissions/
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