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. 1977 Apr;4(4):989–1000. doi: 10.1093/nar/4.4.989

Polynucleotides. XLVI. 1 Synthesis and properties of poly (2'-amino-2'-deoxyadenylic acid).

M Ikehara, T Fukui, N Kakiuchi
PMCID: PMC342499  PMID: 17102

Abstract

Poly (2'-amino-2'-deoxyadenylic acid) [poly (Aa)] was prepared from chemically synthesized 2'-amino-2'-deoxy-ADP by the catalysis of polynucleotide phosphorylase. Poly (Aa) showed a similar UV absorption spectra to poly (A), but quite different CD spectra at pH 7.0 and 5.7. At the former pH it showed a single negative Cotton band and at the latter a curve with a large splitting of bands. Acid titration of poly (Aa) suggested protonated form below pH 7.0. Temperature absorption profiles and their dependency on sodium ion concentration suggested an ordered structure for poly (Aa) which is stabilized by stacking of bases and intrastrand interaction between 2'-amino and internucleotidic phosphate groups. Poly (Aa) forms a 1:2 complex with poly (U) at neutrality and its Tm was 45 degrees in the presence of 0.15M sodium ion.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Blake R. D., Massoulié J., Fresco J. R. Polynucleotides. 8. A spectral approach to the equilibria between polyriboadenylate and polyribouridylate and their complexes. J Mol Biol. 1967 Dec 14;30(2):291–308. [PubMed] [Google Scholar]
  2. FELSENFELD G., RICH A. Studies on the formation of two- and three-stranded polyribonucleotides. Biochim Biophys Acta. 1957 Dec;26(3):457–468. doi: 10.1016/0006-3002(57)90091-4. [DOI] [PubMed] [Google Scholar]
  3. Hobbs J., Sternbach H., Eckstein F. Poly 2'-deoxy-2'-aminouridylic acid. Biochem Biophys Res Commun. 1972 Feb 25;46(4):1509–1515. doi: 10.1016/0006-291x(72)90778-4. [DOI] [PubMed] [Google Scholar]
  4. Hobbs J., Sternbach H., Sprinzl M., Eckstein F. Polynucleotides containing 2'-amino-2'-deoxyribose and 2'-azido-2'-deoxyribose. Biochemistry. 1973 Dec 4;12(25):5138–5145. doi: 10.1021/bi00749a018. [DOI] [PubMed] [Google Scholar]
  5. Ikehara M., Fukui T., Kakiuchi N. Polynucleotides. XL. Synthesis and properties of poly 2'-azido-2'-deoxyadenylic acid. Nucleic Acids Res. 1976 Aug;3(8):2089–2099. doi: 10.1093/nar/3.8.2089. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Klee C. B., Singer M. F. The processive degradation of individual polyribonucleotide chains. II. Micrococcus lysodeikticus polynucleotide phosphorylase. J Biol Chem. 1968 Mar 10;243(5):923–927. [PubMed] [Google Scholar]
  7. Massoulié J., Michelson A. M., Pochon F. Polynucleotide analogues. VI. Physical studies on 5-substituted pyrimidine polynucleotides. Biochim Biophys Acta. 1966 Jan 18;114(1):16–26. [PubMed] [Google Scholar]
  8. RICH A., DAVIES D. R., CRICK F. H., WATSON J. D. The molecular structure of polyadenylic acid. J Mol Biol. 1961 Feb;3:71–86. doi: 10.1016/s0022-2836(61)80009-0. [DOI] [PubMed] [Google Scholar]
  9. Torrence P. F., Bobst A. M., Waters J. A., Witkop B. Synthesis and characterization of potential interferon inducers. Poly(2'-azido-2'-deoxyuridylic acid). Biochemistry. 1973 Sep 25;12(20):3962–3972. doi: 10.1021/bi00744a028. [DOI] [PubMed] [Google Scholar]
  10. Torrence P. F., Waters J. A., Witkop B. Unexpected conformational stability of poly(2'-azido-2'-deoxyuridylic acid). J Am Chem Soc. 1972 May 17;94(10):3638–3639. doi: 10.1021/ja00765a069. [DOI] [PubMed] [Google Scholar]

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