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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Sep 15;68(Pt 10):o2937. doi: 10.1107/S1600536812038809

1-(2-Carb­oxy­eth­yl)-5-ethyl-2-methyl­pyridinium chloride

V Sabari a, G Kalaiselvi b, S Balasubramanian b, S Aravindhan a,*
PMCID: PMC3470310  PMID: 23125723

Abstract

In the crystal structure of the title salt, C11H16NO2 +·Cl, the cations and anions are linked by O—H⋯Cl hydrogen bonds. The structure is further stabilized by weak C—H⋯Cl hydrogen bonds.

Related literature  

For the biological activity of 4-amino­pyridine, see: Judge & Bever (2006); Schwid et al. (1997); Strupp et al. (2004). For related structures, see: Anderson et al. (2005); Fun et al. (2009).graphic file with name e-68-o2937-scheme1.jpg

Experimental  

Crystal data  

  • C11H16NO2 +·Cl

  • M r = 229.70

  • Triclinic, Inline graphic

  • a = 7.5013 (4) Å

  • b = 9.0509 (5) Å

  • c = 9.3452 (5) Å

  • α = 75.253 (2)°

  • β = 80.985 (2)°

  • γ = 72.047 (2)°

  • V = 581.59 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.31 mm−1

  • T = 293 K

  • 0.32 × 0.20 × 0.10 mm

Data collection  

  • Bruker APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.972, T max = 0.992

  • 11668 measured reflections

  • 2772 independent reflections

  • 2363 reflections with I > 2σ(I)

  • R int = 0.026

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.033

  • wR(F 2) = 0.102

  • S = 0.83

  • 2772 reflections

  • 142 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.23 e Å−3

  • Δρmin = −0.19 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812038809/bt6827sup1.cif

e-68-o2937-sup1.cif (16.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038809/bt6827Isup2.hkl

e-68-o2937-Isup2.hkl (133.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812038809/bt6827Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2A⋯Cl1 0.92 (3) 2.06 (3) 2.9749 (12) 170 (2)
C2—H2⋯Cl1i 0.93 2.72 3.6249 (14) 166
C6—H6A⋯Cl1ii 0.97 2.68 3.6261 (14) 166
C11—H11A⋯Cl1iii 0.96 2.79 3.7410 (16) 170

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors thank the UGC, India, for financial support and Dr Babu Varghese, Senior Scientific Officer, SAIF, IIT, Chennai, India, for the X-ray intensity data collection.

supplementary crystallographic information

Comment

4-Aminopyridine (Fampridine) is used clinically in Lambert-Eaton myasthenic syndrome and multiple sclerosis because by blocking potassium channels it prolongs action potentials thereby increasing transmitter release at the neuromuscular junction (Judge & Bever et al., 2006; Schwid et al., 1997; Strupp et al., 2004).

In the title compound (Fig. 1), the bond lengths and angles have normal values. The asymmetric unit is composed of one 1-(2-carboxy ethyl) 5-ethyl 2-methyl pyridinium cation and one Cl- anion. The C1—N1—C5 angle in the pyridinium ring is widened to 121.20 (15) °, compared to 115.25 (13)° in 4-aminopyridine (Anderson et al., 2005) and 120.7 (2)°, in Aminopyridinium (Fun et al., 2009). In the crystal structure, anions and cations are connected by O—H···Cl and C—H···Cl hydrogen bonds.

Experimental

1g (8.3mmol) of freshly distilled 5-ethyl 2-methyl pyridine was dissolved in 10 ml of THF at -10°C under nitrogen atmosphere. To the above solution, 0.8 ml (8.0 mmol) of acrylic acid in 10 ml of THF was added drop wise with continuous stirring. After stirring for 20 min in an ice bath, 0.5 mL of HCl was added and stirred for 24 h. White solid formed after the completion of the reaction and the solid was filtered, washed with THF and dried in vacuum. The product was recrystallized from methanol Yield: 1.52g (80%)

Refinement

All H atoms on carbons were positioned geometrically with C—H distances ranging from 0.95 to 1.00 Å and refined as riding on their parent atoms, with Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(Cmethyl) The hydroxyl H atom was freely refined.

Figures

Fig. 1.

Fig. 1.

View of one molecule of the title compound showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level (arbitrary spheres for the H atoms).

Crystal data

C11H16NO2+·Cl Z = 2
Mr = 229.70 F(000) = 244
Triclinic, P1 Dx = 1.312 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.5013 (4) Å Cell parameters from 5710 reflections
b = 9.0509 (5) Å θ = 1.8–28.5°
c = 9.3452 (5) Å µ = 0.31 mm1
α = 75.253 (2)° T = 293 K
β = 80.985 (2)° Triclinic, colourless
γ = 72.047 (2)° 0.32 × 0.20 × 0.10 mm
V = 581.59 (5) Å3

Data collection

Bruker APEXII CCD area-detector diffractometer 2772 independent reflections
Radiation source: fine-focus sealed tube 2363 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.026
ω and φ scans θmax = 27.9°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −9→9
Tmin = 0.972, Tmax = 0.992 k = −11→11
11668 measured reflections l = −10→12

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.102 w = 1/[σ2(Fo2) + (0.0665P)2 + 0.2215P] where P = (Fo2 + 2Fc2)/3
S = 0.83 (Δ/σ)max < 0.001
2772 reflections Δρmax = 0.23 e Å3
142 parameters Δρmin = −0.19 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.034 (6)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 1.11724 (18) 0.12433 (14) 0.49990 (13) 0.0607 (3)
Cl1 1.13273 (5) 0.19233 (4) 0.17024 (4) 0.04786 (14)
N1 0.73265 (15) 0.39471 (13) 0.81065 (11) 0.0344 (2)
C1 0.60912 (19) 0.31985 (15) 0.89780 (13) 0.0373 (3)
C8 1.01152 (18) 0.23770 (16) 0.56489 (14) 0.0388 (3)
C5 0.67204 (19) 0.53934 (15) 0.72045 (13) 0.0374 (3)
H5 0.7607 0.5877 0.6639 0.045*
O1 0.92281 (18) 0.36464 (13) 0.49974 (11) 0.0570 (3)
C4 0.4848 (2) 0.61779 (16) 0.70897 (14) 0.0390 (3)
C11 0.6787 (2) 0.16261 (18) 1.00116 (16) 0.0503 (4)
H11A 0.7271 0.0810 0.9453 0.075*
H11B 0.5770 0.1396 1.0707 0.075*
H11C 0.7768 0.1662 1.0539 0.075*
C3 0.3566 (2) 0.54196 (18) 0.79512 (16) 0.0441 (3)
H3 0.2282 0.5900 0.7897 0.053*
C2 0.4195 (2) 0.39556 (17) 0.88856 (15) 0.0430 (3)
H2 0.3323 0.3465 0.9468 0.052*
C6 0.93976 (19) 0.32296 (19) 0.81201 (15) 0.0436 (3)
H6A 0.9709 0.2834 0.9143 0.052*
H6B 1.0014 0.4055 0.7671 0.052*
C7 1.0172 (2) 0.18822 (18) 0.73100 (15) 0.0448 (3)
H7B 1.1466 0.1356 0.7534 0.054*
H7A 0.9463 0.1110 0.7692 0.054*
C9 0.4262 (2) 0.77820 (17) 0.60617 (17) 0.0510 (4)
H9B 0.4899 0.8477 0.6273 0.061*
H9A 0.2920 0.8242 0.6246 0.061*
C10 0.4713 (3) 0.7697 (2) 0.44375 (17) 0.0566 (4)
H10A 0.4327 0.8749 0.3825 0.085*
H10C 0.4054 0.7038 0.4214 0.085*
H10B 0.6042 0.7252 0.4247 0.085*
H2A 1.108 (3) 0.153 (3) 0.399 (3) 0.099 (8)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0687 (7) 0.0570 (7) 0.0404 (6) 0.0055 (6) −0.0043 (5) −0.0115 (5)
Cl1 0.0537 (2) 0.0563 (2) 0.03510 (19) −0.01908 (17) 0.00042 (14) −0.01085 (14)
N1 0.0393 (5) 0.0394 (6) 0.0274 (5) −0.0143 (4) −0.0016 (4) −0.0091 (4)
C1 0.0487 (7) 0.0390 (7) 0.0276 (5) −0.0171 (6) 0.0032 (5) −0.0114 (5)
C8 0.0357 (6) 0.0436 (7) 0.0364 (6) −0.0143 (5) −0.0016 (5) −0.0048 (5)
C5 0.0470 (7) 0.0387 (7) 0.0306 (6) −0.0185 (5) −0.0004 (5) −0.0088 (5)
O1 0.0768 (8) 0.0457 (6) 0.0376 (5) −0.0042 (5) −0.0076 (5) −0.0044 (4)
C4 0.0499 (7) 0.0368 (6) 0.0329 (6) −0.0116 (5) −0.0040 (5) −0.0124 (5)
C11 0.0660 (9) 0.0424 (8) 0.0364 (7) −0.0154 (7) 0.0070 (6) −0.0044 (6)
C3 0.0407 (7) 0.0496 (8) 0.0443 (7) −0.0111 (6) −0.0002 (6) −0.0185 (6)
C2 0.0454 (7) 0.0486 (8) 0.0395 (7) −0.0211 (6) 0.0081 (6) −0.0148 (6)
C6 0.0391 (7) 0.0578 (8) 0.0350 (6) −0.0148 (6) −0.0088 (5) −0.0070 (6)
C7 0.0382 (7) 0.0514 (8) 0.0350 (6) −0.0061 (6) −0.0022 (5) −0.0010 (6)
C9 0.0661 (10) 0.0376 (7) 0.0460 (8) −0.0078 (7) −0.0099 (7) −0.0087 (6)
C10 0.0693 (10) 0.0565 (9) 0.0428 (8) −0.0199 (8) −0.0084 (7) −0.0039 (7)

Geometric parameters (Å, º)

O2—C8 1.3097 (18) C11—H11C 0.9600
O2—H2A 0.92 (3) C3—C2 1.377 (2)
N1—C5 1.3499 (17) C3—H3 0.9300
N1—C1 1.3604 (16) C2—H2 0.9300
N1—C6 1.4885 (17) C6—C7 1.514 (2)
C1—C2 1.381 (2) C6—H6A 0.9700
C1—C11 1.4938 (19) C6—H6B 0.9700
C8—O1 1.1971 (17) C7—H7B 0.9700
C8—C7 1.5058 (19) C7—H7A 0.9700
C5—C4 1.372 (2) C9—C10 1.519 (2)
C5—H5 0.9300 C9—H9B 0.9700
C4—C3 1.388 (2) C9—H9A 0.9700
C4—C9 1.5009 (19) C10—H10A 0.9600
C11—H11A 0.9600 C10—H10C 0.9600
C11—H11B 0.9600 C10—H10B 0.9600
C8—O2—H2A 110.8 (16) C3—C2—H2 119.3
C5—N1—C1 121.15 (11) C1—C2—H2 119.3
C5—N1—C6 116.99 (11) N1—C6—C7 114.17 (11)
C1—N1—C6 121.85 (11) N1—C6—H6A 108.7
N1—C1—C2 117.68 (12) C7—C6—H6A 108.7
N1—C1—C11 120.43 (13) N1—C6—H6B 108.7
C2—C1—C11 121.88 (12) C7—C6—H6B 108.7
O1—C8—O2 123.99 (13) H6A—C6—H6B 107.6
O1—C8—C7 124.60 (13) C8—C7—C6 114.89 (12)
O2—C8—C7 111.41 (12) C8—C7—H7B 108.5
N1—C5—C4 122.58 (12) C6—C7—H7B 108.5
N1—C5—H5 118.7 C8—C7—H7A 108.5
C4—C5—H5 118.7 C6—C7—H7A 108.5
C5—C4—C3 117.08 (13) H7B—C7—H7A 107.5
C5—C4—C9 120.07 (13) C4—C9—C10 112.48 (12)
C3—C4—C9 122.85 (14) C4—C9—H9B 109.1
C1—C11—H11A 109.5 C10—C9—H9B 109.1
C1—C11—H11B 109.5 C4—C9—H9A 109.1
H11A—C11—H11B 109.5 C10—C9—H9A 109.1
C1—C11—H11C 109.5 H9B—C9—H9A 107.8
H11A—C11—H11C 109.5 C9—C10—H10A 109.5
H11B—C11—H11C 109.5 C9—C10—H10C 109.5
C2—C3—C4 119.99 (13) H10A—C10—H10C 109.5
C2—C3—H3 120.0 C9—C10—H10B 109.5
C4—C3—H3 120.0 H10A—C10—H10B 109.5
C3—C2—C1 121.50 (12) H10C—C10—H10B 109.5
C5—N1—C1—C2 1.26 (17) C4—C3—C2—C1 −0.9 (2)
C6—N1—C1—C2 −179.81 (11) N1—C1—C2—C3 −0.25 (19)
C5—N1—C1—C11 −177.69 (11) C11—C1—C2—C3 178.69 (13)
C6—N1—C1—C11 1.24 (18) C5—N1—C6—C7 −105.73 (14)
C1—N1—C5—C4 −1.18 (18) C1—N1—C6—C7 75.30 (15)
C6—N1—C5—C4 179.84 (11) O1—C8—C7—C6 −14.0 (2)
N1—C5—C4—C3 0.01 (19) O2—C8—C7—C6 165.58 (13)
N1—C5—C4—C9 −179.76 (11) N1—C6—C7—C8 69.15 (16)
C5—C4—C3—C2 0.99 (19) C5—C4—C9—C10 68.80 (18)
C9—C4—C3—C2 −179.24 (13) C3—C4—C9—C10 −110.95 (16)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C2—H2···Cl1i 0.93 2.72 3.6249 (14) 166
C6—H6A···Cl1ii 0.97 2.68 3.6261 (14) 166
O2—H2A···Cl1 0.92 (3) 2.06 (3) 2.9749 (12) 170 (2)
C11—H11A···Cl1iii 0.96 2.79 3.7410 (16) 170

Symmetry codes: (i) x−1, y, z+1; (ii) x, y, z+1; (iii) −x+2, −y, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT6827).

References

  1. Anderson, F. P., Gallagher, J. F., Kenny, P. T. M. & Lough, A. J. (2005). Acta Cryst. E61, o1350–o1353.
  2. Bruker (2008). APEX2, SAINT and SADABS Bruker AXS Inc., Madison Wisconsin, USA.
  3. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  4. Fun, H.-K., John, J., Jebas, S. R. & Balasubramanian, T. (2009). Acta Cryst. E65, o765–o766. [DOI] [PMC free article] [PubMed]
  5. Judge, S. & Bever, C. (2006). Pharmacol. Ther. 111, 224–259. [DOI] [PubMed]
  6. Schwid, S. B., Petrie, M. D., McDermott, M. P., Tierney, D. S., Mason, D. H. & Goodman, A. D. (1997). Neurology, 48, 817–821. [DOI] [PubMed]
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  9. Strupp, M., Kalla, R., Dichgans, M., Fraitinger, T., Glasauer, S. & Brandt, T. (2004). Neurology, 62, 1623–1625. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812038809/bt6827sup1.cif

e-68-o2937-sup1.cif (16.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038809/bt6827Isup2.hkl

e-68-o2937-Isup2.hkl (133.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812038809/bt6827Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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