Skip to main content
Journal of Virology logoLink to Journal of Virology
. 1977 Jan;21(1):386–395. doi: 10.1128/jvi.21.1.386-395.1977

Complexity and polyadenylic acid content of visna virus 60-70S RNA.

R Vigne, M Brahic, P Filippi, J Tamalet
PMCID: PMC353825  PMID: 189072

Abstract

The genomic complexity of visna virus was measured by quantitative analysis of 18 RNase T1-resistant oligonucleotides from 60-70S RNA. T1-resistant oligonucleotides were separated by two-dimensional polyacrylamide gel electrophoresis. Visna virus had a genomic complexity of 3.6 X 10(6) daltons, very close to the size of a single 30-40S RNA subunit. It was therefore concluded that the visna virus genome is largely polyploid. Visna virus 60-70S RNA polyadenylic acid segment was purified by T1 RNase digestion followed by oligodeoxythymidylic acid-cellulose column chromatography. It contained over 99% AMP and had a size of about 200 nucleotides. The binding capacities on oligodeoxythymidylic acid-cellulose of native 60-70S RNA and purified 30-40S RNA subunits were examined. It was concluded that two out of three intact subunits contain a polyadenylic acid segment.

Full text

PDF
388

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Beemon K. L., Faras A. J., Hasse A. T., Duesberg P. H., Maisel J. E. Genomic complexities of murine leukemia and sarcoma, reticuloendotheliosis, and visna viruses. J Virol. 1976 Feb;17(2):525–537. doi: 10.1128/jvi.17.2.525-537.1976. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Beemon K., Duesberg P., Vogt P. Evidence for crossing-over between avian tumor viruses based on analysis of viral RNAs. Proc Natl Acad Sci U S A. 1974 Oct;71(10):4254–4258. doi: 10.1073/pnas.71.10.4254. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Billeter M. A., Parsons J. T., Coffin J. M. The nucleotide sequence complexity of avian tumor virus RNA. Proc Natl Acad Sci U S A. 1974 Sep;71(9):3560–3564. doi: 10.1073/pnas.71.9.3560. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Brahic M., Tamalet J., Filippi P., Delbecchi L. The high molecular weight RNA of Visna virus. Biochimie. 1973;55(8):885–891. doi: 10.1016/s0300-9084(73)80165-8. [DOI] [PubMed] [Google Scholar]
  5. Brahic M., Vigne R. Properties of visna virus particles harvested at short time intervals: RNA content, infectivity, and ultrastructure. J Virol. 1975 May;15(5):1222–1230. doi: 10.1128/jvi.15.5.1222-1230.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Coffin J. M., Billeter M. A. A physical map of the Rous sarcoma virus genome. J Mol Biol. 1976 Jan 25;100(3):293–318. doi: 10.1016/s0022-2836(76)80065-4. [DOI] [PubMed] [Google Scholar]
  7. Cooper G. M., Temin H. M. Infectious rous sarcoma virus and reticuloendotheliosis virus DNAs. J Virol. 1974 Nov;14(5):1132–1141. doi: 10.1128/jvi.14.5.1132-1141.1974. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Delius H., Duesberg P. H., Mangel W. F. Electron microscope measurements of rous sarcoma virus RNA. Cold Spring Harb Symp Quant Biol. 1975;39(Pt 2):835–843. doi: 10.1101/sqb.1974.039.01.097. [DOI] [PubMed] [Google Scholar]
  9. Duesberg P. H. Physical properties of Rous Sarcoma Virus RNA. Proc Natl Acad Sci U S A. 1968 Aug;60(4):1511–1518. doi: 10.1073/pnas.60.4.1511. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Duesberg P. H. The RNA of influenza virus. Proc Natl Acad Sci U S A. 1968 Mar;59(3):930–937. doi: 10.1073/pnas.59.3.930. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Duesberg P. H., Vogt P. K. Gel electrophoresis of avian leukosis and sarcoma viral RNA in formamide: comparison with other viral and cellular RNA species. J Virol. 1973 Sep;12(3):594–599. doi: 10.1128/jvi.12.3.594-599.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Friedmann A., Coward J. E., Harter D. H., Lipset J. S., Morgan C. Electron microscopic studies of visna virus ribonucleic acid. J Gen Virol. 1974 Oct;25(1):93–104. doi: 10.1099/0022-1317-25-1-93. [DOI] [PubMed] [Google Scholar]
  13. Gillespie D., Takemoto K., Robert M., Gallo R. C. Polyadenylic acid in Visna virus RNA. Science. 1973 Mar 30;179(4080):1328–1330. doi: 10.1126/science.179.4080.1328. [DOI] [PubMed] [Google Scholar]
  14. Haase A. T., Baringer J. R. The structural polypeptides of RNA slow viruses. Virology. 1974 Jan;57(1):238–250. doi: 10.1016/0042-6822(74)90124-x. [DOI] [PubMed] [Google Scholar]
  15. Haase A. T., Garapin A. C., Faras A. J., Taylor J. M., Bishop J. M. A comparison of the high molecular weight RNAs of visna virus and Rous sarcoma virus. Virology. 1974 Jan;57(1):259–270. doi: 10.1016/0042-6822(74)90126-3. [DOI] [PubMed] [Google Scholar]
  16. Haase A. T., Levinson W. Inhibition of RNA slow viruses by thiosemicarbazones. Biochem Biophys Res Commun. 1973 Apr 16;51(4):875–880. doi: 10.1016/0006-291x(73)90008-9. [DOI] [PubMed] [Google Scholar]
  17. Haase A. T. The slow infection caused by visna virus. Curr Top Microbiol Immunol. 1975;72:101–156. doi: 10.1007/978-3-642-66289-8_4. [DOI] [PubMed] [Google Scholar]
  18. Haase A. T., Traynor B. L., Ventura P. E., Alling D. W. Infectivity of visna virus DNA. Virology. 1976 Mar;70(1):65–79. doi: 10.1016/0042-6822(76)90236-1. [DOI] [PubMed] [Google Scholar]
  19. Ihle J. N., Lee K. L., Kennedy F. T. Fractionation of 34 S ribonucleic acid subunits from oncornaviruses on polyuridylate-sepharose columns. J Biol Chem. 1974 Jan 10;249(1):38–42. [PubMed] [Google Scholar]
  20. Khan M. S., Maden B. E. Nucleotide sequences within the ribosomal ribonucleic acids of HeLa cells, Xenopus laevis and chick embryo fibroblasts. J Mol Biol. 1976 Feb 25;101(2):235–254. doi: 10.1016/0022-2836(76)90375-2. [DOI] [PubMed] [Google Scholar]
  21. Lai M. M., Duesberg P. H. Adenylic acid-rich sequence in RNAs of Rous sarcoma virus and Rauscher mouse leukaemia virus. Nature. 1972 Feb 18;235(5338):383–386. doi: 10.1038/235383c0. [DOI] [PubMed] [Google Scholar]
  22. Quade K., Smith R. E., Nichols J. L. Evidence for common nucleotide sequences in the RNA subunits comprising Rous sarcoma virus 70 S RNA. Virology. 1974 Sep;61(1):287–291. doi: 10.1016/0042-6822(74)90263-3. [DOI] [PubMed] [Google Scholar]
  23. Schibler U., Wyler T., Hagenbüchle O. Changes in size and secondary structure of the ribosomal transcription unit during vertebrate evolution. J Mol Biol. 1975 May 25;94(3):503–517. doi: 10.1016/0022-2836(75)90217-x. [DOI] [PubMed] [Google Scholar]
  24. Staynov D. Z., Pinder J. C., Gratzer W. B. Molecular weight determination of nucleic acids by gel electrophoresis in non-aqueous solution. Nat New Biol. 1972 Jan 26;235(56):108–110. doi: 10.1038/newbio235108a0. [DOI] [PubMed] [Google Scholar]
  25. Wang L. H., Duesberg P., Beemon K., Vogt P. K. Mapping RNase T1-resistant oligonucleotides of avian tumor virus RNAs: sarcoma-specific oligonucleotides are near the poly(A) end and oligonucleotides common to sarcoma and transformation-defective viruses are at the poly(A) end. J Virol. 1975 Oct;16(4):1051–1070. doi: 10.1128/jvi.16.4.1051-1070.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Wang L. H., Duesberg P. Properties and location of poly(A) in Rous sarcoma virus RNA. J Virol. 1974 Dec;14(6):1515–1529. doi: 10.1128/jvi.14.6.1515-1529.1974. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. de Wachter R., Fiers W. Preparative two-dimensional polyacrylamide gel electrophoresis of 32 P-labeled RNA. Anal Biochem. 1972 Sep;49(1):184–197. doi: 10.1016/0003-2697(72)90257-6. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Virology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES