Abstract
We have synthesized and characterized a series of compounds containing the 3-azatetracyclo[5.2.1.15,8.01,5]undecane scaffold designed as analogs of amantadine, an inhibitor of the M2 proton channel of influenza A virus. Inhibition of the wild-type (wt) M2 channel and the amantadine-resistant A/M2-S31N and A/M2-V27A mutant ion channels were measured in Xenopus oocytes using two-electrode voltage clamp (TEV) assays. Most of the novel compounds inhibited the wt ion channel in the low micromolar range. Of note, several compounds inhibited the A/M2 V27A mutant ion channel, one of them with submicromolar IC50. None of the compounds was found to inhibit the S31N mutant ion channel. The antiviral activity of three novel dual wt and A/M2-V27A channels inhibitors was confirmed by influenza virus yield assays.
Keywords: Amantadine, cage compounds, influenza A virus, M2 proton channel, drug design
Introduction
The influenza A virus M2 protein is a 97 residues long integral membrane protein with a transmembrane (TM) domain of 19 residues, a small ectodomain of 23 residues, and a 54 residues long cytoplasmic tail.1 This M2 protein is encoded by a spliced mRNA derived from viral RNA segment 7.2 The A/M2 proton channel activity is required for viral replication.3 Influenza A virus particles enter the host cells by endocytosis (mainly via the clathrin-mediated route).4 Within the endosome, release of the viral ribonucleoprotein (RNPs) complexes from the matrix M1 protein, depends on acidification of the viral interior. This lowering of the pH is accomplished by the M2 proton channel, which facilitates the flow of protons from the acidic endosomal lumen into the interior of the virion.5 This proton channel function of M2 has been found to be essential in all influenza A subtypes thus far studied. In some virus strains, e.g. H7N1 fowl plague virus, the A/M2 protein also equilibrates the pH of the trans-Golgi network to prevent a premature conformational change of the viral hemagglutinin (HA).6
Influenza A viruses are important pathogens which are capable of causing significant morbidity and mortality in humans. Two classes of anti-viral drugs are currently available: the M2 ion channel inhibitors [amantadine (Amt) and rimantadine] and the neuraminidase (NA) inhibitors (oseltamivir and zanamivir).6 However, the usefulness of Amt and rimantadine dropped sharply in recent years due to the widespread of resistant viruses, which prompted the Centers for Disease Control to recommend discontinuing the use of Amt-based drugs.7–8 Also, resistance to oseltamivir has been frequently observed in recent flu seasons.9–10 Therefore, there is an urgent need to develop the next generation of anti-viral drugs that are active against drugresistant influenza viruses. Systematic mutational analysis of the pore-line residues of the A/M2 TM domain identified many Amt-resistance mutations.11 However, only a few of these mutations (i.e. L26F, V27A, and S31N) have been observed in transmissible viruses, with the S31N mutation being the most frequently occurring Amt-resistance mutation.12 The channel properties (ion selectivity and activity) of these mutants appear to be very similar to those of the wt M2 channel, suggesting that the channel properties need to be finely tuned in order for the virus to be transmissible.
Many efforts have been made to discover new small molecular inhibitors of Amt-resistant mutant forms of A/M2. For example, Wang et al. reported several spiro compounds, such as 1-3. Spiroadamantane 3 inhibits the L26F and V27A A/M2 mutants with good efficacy in electrophysiological and virus plaque reduction assays.13–15 Most recently, this group also discovered new compounds, such as 4 and 5, that inhibit the most prevalent drug-resistant A/M2 mutant, S31N (Chart 1).16–18
In this study, we report some novel scaffolds designed to inhibit the A/M2 channel. Several pyrrolidine derivatives were found to inhibit the wt channel as well as the M2-V27A mutant ion channel. The best compound, guanidine 16d, has a low micromolar activity against the wt channel (IC50 = 3.4 μM) and submicromolar activity against the M2-V27A mutant (IC50 = 0.29 μM).
Chemistry
During the past years, our group has synthesized several polycyclic Amt analogs containing different scaffolds, including ring-contracted, ring-rearranged and 2,2-dialkyl derivatives of Amt (Chart 2).19–22 Several ring-contracted analogs of Amt, such as amines 6 and 7 were evaluated for inhibition of A/M2 proton channel activity, by using the conductance assay in M2-expressing oocytes. They displayed similar IC50 values for wt A/M2 as Amt, but, unfortunately, were inactive against the Amt-resistant S31N or V27A mutant forms of A/M2.20 We have also explored the activity of larger, ring-rearranged analogs of Amt using the pentacyclo[6.4.0.02,10.03,7.04,9]dodecane scaffold. Very interestingly, while primary amines 8 and 9 and several derivatives, including secondary and tertiary amines, amidines and guanidines did not inhibit A/M2 proton channel activity, the conformationally more rigid pyrrolidine-based derivatives 10 and 11 did show a promising activity against the wt A/M2 channel, being only slightly less active than Amt. Moreover, while the primary amines 8 and 9 did not show any activity against the V27A mutant form of A/M2, both pyrrolidine derivatives showed a marginal activity against this mutant (Table 1).20,22
Table 1.
Compound | A/M2 wt (mean ± SE) | A/M2 S31N (mean ± SE) | A/M2 V27A (mean ± SE) | |||
---|---|---|---|---|---|---|
| ||||||
Inhibition by 100 μM for 2 min (%) | IC50 (μM) | Inhibition by 100 μM for 2 min (%) | IC50 (μM) | Inhibition by 100 μM for 2 min (%) | IC50 (μM) | |
Amantadine | 91.0 ± 2.1 | 16.0 ± 1.2 | 35.6 ± 1.5 | 199.9 ± 13.5 | 10.8 ± 2.0 | ND |
6 | 93.6 ± 0.9 | 17.0 ± 1.0 | 22.1 ± 0.2 | 252.2 ± 13.2 | 10.6 ± 0.7 | ND |
7 | 97.3 ± 0.4 | 7.2 ± 0.3 | 0 | ND | 17.6 ± 1.8 | ND |
8 | 4.8 ± 2.8 | ND | 0 | ND | 0 | ND |
9 | 12.8 ± 1.0 | ND | 0 | ND | 0 | ND |
10 | 82.5 ± 0.8 | 33.5 ± 1.6 | 0 | ND | 9.2 ± 1.0 | ND |
11 | 86.5 ± 0.8 | 24.0 ± 2.1 | 0 | ND | 17.7 ± 0.5 | ND |
14a | 93.8 ± 0.8 | 9.7 | 0 | ND | 26.0 ± 0.3 | ND |
15a | 87.9 ± 0.6 | 16.3 | 0 | ND | 12.3 ± 1.6 | ND |
16a | 92.4 ± 0.6 | 6.1 | 1.0 ± 1.0 | ND | 84.2 ± 1.0 | 11.4 |
14b | 93.9 ± 0.2 | 11.7 | 6.2 ± 0.7 | ND | 5.6 ± 1.5 | ND |
15b | 88.3 ± 0.2 | 25.2 | 0 | ND | 0 | ND |
16b | 95.7 ± 1.5 | 1.05 | 0 | ND | 0 | ND |
14c | 65.0 ± 1.7 | ND | 13.1 ± 1.7 | ND | 15.8 ± 2.7 | ND |
16c | 42.8 ± 1.8 | ND | 10.8 ± 1.2 | ND | 79.2 ± 0.4 | 13.8 |
14d | 85.3 ± 0.8 | 4.5 | 11.9 ± 1.0 | ND | 76.2 ± 0.3 | 20.5 |
16d | 93.1 ± 2.5 | 3.4 | 5.7 ± 2.0 | ND | 93.8 ± 0.9 | 0.29 |
ND, Not Determined.
Isochronic (2 min) values for IC50 are given. See text and experimental section for details.
Based on these promising results, we reasoned that the synthesis of pyrrolidine analogs of the already active bisnoradamantane 7, featuring an unprecedented 3-azatetracyclo[5.2.1.15,8.01,5]undecane ring, may lead to compounds with higher activity against the wt and the V27A mutant of A/M2.
The reaction of the known23–24 diacids 12a,b with urea at 180 °C for 30 minutes yielded imides 13a,b which were subsequently reduced to give the secondary amines 14a,b in good overall yields. Reductive alkylation of the secondary amines with formaldehyde and NaCNBH3 led to the corresponding tertiary amines 15a,b in good yields. Taking into account our observation that some of the corresponding guanidines derived from our previously synthesized amines were also inhibitors of the A/M2 channel,20 we synthesized guanidines 16a,b from amines 14a,b and 1H-pyrazole-1-carboxamidine monohydrochloride (Scheme 1).
Recent experimental and computational studies have shown that the mutation of Val27 to a residue with a smaller side chain such as alanine (A/M2-V27A mutant) destroyed the hydrophobic gate formed by this residue and increased the pore radius by ~2 Å at the N-terminal end.14,25–26
The amine 14a and guanidine 16a displayed higher inhibitory activity against the M2-V27A mutant channel than their corresponding smaller analogs, 14b and 16b (see below). Also, since recent MD calculations suggested that larger, more hydrophobic molecules may fill the pore of the V27A mutant better,14 we designed two novel, larger analogs of the dual inhibitor 16a, i.e. 16c and 16d.
For the synthesis of pyrrolidines 14c,d and 16c,d following the route outlined in Scheme 1, novel diacid derivatives 12c,d were required. Thus, we synthesized diacids 12c,d from easily available diketones 17c,d, following the synthetic sequence shown in Scheme 2 that we had previously developed for related bisnoradamantane derivatives.27
To homologate diketones 17c-d,28–30 they were transformed into a mixture of the corresponding bis-vinyl iodides syn- and anti-19c-d, via the corresponding bis-hydrazones, 18c-d, following the Barton procedure, in 41 and 56%, respectively, overall yield.31–32 Then, palladium (0) catalyzed methoxycarbonylation of 19c-d afforded 20c-d in 62 and 64% yield, respectively, as a mixture of syn and anti regioisomers. Catalytic hydrogenation (Pd/C) of the mixture of syn- and anti-20c-d gave an stereoisomeric mixture of diesters 21c-d in 77 and 74% yield, respectively. Reaction of diesters 21c-d with two equivalents of LiHMDS in anhydrous THF, followed by reaction of the corresponding bis-enolate with one equivalent of iodine gave 22c-d in 47 and 57% yield, respectively. Finally, hydrolysis of diesters 22c-d gave the diacids 12c-d in, 63% and 80% yield, respectively (Scheme 2).
From diacids 12c-d, and following the synthetic sequence shown in Scheme 1, we prepared the amines 14c-d and the guanidines 16c-d in good overall yields (see Supporting information for details).
All the pharmacologically evaluated compounds were fully characterized as salts (hydrochlorides or tartrates) through their spectroscopic data and elemental analyses.
Pharmacological activity and structure-activity relationships
Inhibition of wt and Amt-resistant A/M2 ion channels
The inhibitory activity of the compounds was tested on A/M2 channels expressed in Xenopus oocytes using the TEV technique. All inhibitors were initially tested at 100 μM; those that inhibited the wt A/M2 channel activity by more than 75% were chosen for measurement of their 50% inhibitory concentration (IC50). The results are given in Table 1.
Amt inhibited wt A/M2 channel with an IC50 of 16.0 μM in an isochronic (2 min) inhibition assay. It has been suggested that in designing Amt analogs, pyrrolidine or piperidine derivatives may result in a more favorable orientation inside the M2 channel pore as compared to freely rotating alkylamine chains.33 Thus, we had previously tested tetracyclic derivatives 8 and 9 and conformationally more rigid amines 10 and 11 (Table 1).20 In sharp contrast with the poor performance of primary amines 8 and 9, diene 10 was shown to be able to inhibit wt A/M2 channel by more than 80%, showing an IC50 of 33.5 μM. Bis-cyclopropanation slightly increased the potency, since derivative 11 showed an IC50 of 24.0 μM. Interestingly, 11 (at a concentration of 100 μM) inhibited the A/M2 V27A channel activity by 17.7%, which is superior to Amt (10.8%), yet much less than 1-3.13–15
Based on these results, we synthesized compounds 14a, 15a and 16a, as conformationally more rigid analogs of 7. In agreement with the previous trend observed in going from 8 and 9 to 10 and 11, pyrrolidines 14a and 16a were potent inhibitors of the wt channel (IC50 of 9.7 and 6.1 μM, respectively) and, very interestingly, were better inhibitors of the V27A mutant channel than 7, with the guanidine 16a showing an IC50 of 11.4 μM. Alkylation of 14a to 15a reduced the inhibitory potency both for the wt and the V27A mutant.
We also synthesized smaller and larger analogs of 14a and 16a. As expected, in going from 14a and 16a to the smaller analogs 14b and 16b, an important reduction of the activity against the V27A mutant was observed, although both compounds kept the inhibitory activity against the wt. Again, the tertiary amine 15b was less potent than the corresponding secondary amine 14b. For this reason, no further tertiary amines were synthesized.
In going from the dimethyl derivatives 14a and 16a to their corresponding diethyl derivatives, 14c and 16c, the activity against both the wt and the V27A mutant channels diminished, probably because the freely rotating ethyl chains of 14c and 16c make destabilizing contacts with the backbone of the protein. These contacts should be more evident in the narrower wt channel, as reflected in the lower inhibitory activities of 14c and 16c against the wt channel compared to 14a and 16a. In the conformationally more rigid amine 14d and guanidine 16d the low micromolar inhibitory activity against the wt channel was restored and, pleasingly, good inhibition of the V27A mutant channel was observed, with 16d showing an IC50 of 0.29 μM.
Binding of guanidine 16d
To determine the binding affinity of this class of compounds, we chose one of the most potent inhibitor against wt M2, 16d, and measured its affinity by solution NMR drug titration. A peptide spanning the transmembrane domain (22–46) of M2, designated as M2TM, was reconstituted in dodecylphosphocholine (DPC) micelles in a 1:50 peptide to detergent ratio, under which condition M2TM forms tetramer predominantly. 16d was titrated into the solution and the characteristic peak of W41 Hε1 was monitored in 1D 1H-NMR (Figure S1). It was found that drug-bound form of M2 is in slow exchange with the apo-form: a new peak at 10.9 ppm, corresponding to W41 Hε1, emerges upon drug addition and continuously increases with drug titration while the peak at 10.4 ppm associated with the apo-form becomes weaker. Previously, we observed that this peak correlates with the binding of drugs to the pore of the channel.34 A plot of the peak integral at 10.9 ppm against increasing drug concentrations is shown in Figure 1. The data were fitted using the nonlinear least-squares fitting equation as described earlier.34 The best fit gave a stoichiometry ratio of 1.37 ± 0.28 drug per tetramer and a dissociation constant Kd of 40 ± 24 μM. It should be noted that the titration was conducted at a protein concentration (1.6 mM) that is significantly above Kd, thus the actual Kd is difficult to be determined. However, theoretical curve fittings with fixed stoichiometry (N=1, meaning one drug per tetramer binding) and different Kd (4 μM, 100 μM, and 400 μM) showed the Kd to be significantly less than 100 μM (see Figure 1).
It is worth noting that the difference between the IC50 and Kd reflects the differences in the experimental assays used to determine these properties. It has long been known that M2 channel blockers are very slow binders, as noted in the second order rate constant of amantadine (i.e., 600 to 900 M−1s−1 for the Udorn strain).35 So, the IC50 depends on the amount of time the drug is exposed to the target.
Antiviral activity and cytotoxicity in cell culture
All novel compounds were subjected to antiviral evaluation against a wide range of DNA and RNA viruses, using CPE reduction assays in relevant cell lines. None of the compounds displayed activity against the enveloped DNA viruses herpes simplex virus (type 1 or type 2) or vaccinia virus; the enveloped RNA viruses feline coronavirus, parainfluenza-3 virus, respiratory syncytial virus, vesicular stomatitis virus, Sindbis virus or Punta Toro virus; or the non-enveloped RNA viruses Coxsackievirus B4 and Reovirus-1 (data not shown).
In our basic CPE reduction assays with influenza virus, performed in MDCK cell cultures, three virus strains were used: the A/PR/8/34 strain, an A/H1N1 virus with two amantadine-resistance mutations (S31N and V27T) in the A/M2 protein; the A/HK/7/87 strain, which has a wt A/M2 protein, and the B/HK/5/72 strain. The antiviral data obtained by microscopic scoring of the virus-induced CPE were confirmed by the colorimetric MTS cell viability assay. In parallel, the compounds were applied to uninfected MDCK cells to estimate the cytotoxicity by microscopy or MTS cell viability assay (Table 2).
Table 2.
Compound | Antiviral EC50b (μM) | Cytotoxicity (μM) at 72 hr | ||||||
---|---|---|---|---|---|---|---|---|
Influenza A/H1N1 | Influenza A/H3N2 | Influenza B | CC50c | MCCd | ||||
CPE | MTS | CPE | MTS | CPE | MTS | |||
14a | >100 | >100 | 1.6 | >100 | >100 | >100 | 59 | 100 |
15a | >100 | >100 | >100 | >100 | >100 | >100 | 49 | ≥20 |
16a | >100 | >100 | >100 | >100 | >100 | >100 | 1.4 | 4 |
14b | >100 | >100 | 7.9 | 7.2 | >100 | >100 | ≥59 | 100 |
15b | >100 | >100 | >100 | >100 | >100 | >100 | >100 | ≥100 |
16b | >50 | >50 | >50 | >50 | >50 | >50 | 10 | 8.5 |
14c | >100 | >100 | >100 | >100 | >100 | >100 | 49 | 20 |
16c | >100 | >100 | >100 | >100 | >100 | >100 | 6.2 | 4.0 |
14d | >100 | >100 | >100 | >100 | >100 | >100 | 6.8 | 4.0 |
16d | >100 | >100 | >100 | >100 | >100 | >100 | 3.1 | 4.0 |
Amantadine | 34 | 38 | 0.84 | 0.82 | >500 | >500 | >500 | >500 |
Rimantadine | 18 | 4.3 | 0.62 | 0.12 | >500 | >500 | 203 | 500 |
MDCK: Madin-Darby canine kidney cells.
Virus strains: A/PR/8/34 (A/H1N1); A/HK/7/87 (A/H3N2) and B/HK/5/72. The EC50 represents the 50% effective concentration, or compound concentration producing 50% inhibition of virus replication, as determined by microscopic scoring of the CPE at 72 hr post infection, or by the MTS cell viability test.
MCC: minimum cytotoxic concentration, or concentration producing minimal alterations in cell morphology after 72 hr incubation with compound.
CC50: 50% cytotoxic concentration, as determined by the MTS cell viability test. Values shown are the mean of 2–3 determinations.
In agreement with the TEV assays (see above), all the compounds were not active against the amantadine-resistant A/PR/8/34 strain that carries the M2-S31N mutation. For compounds 14a, 14b and Amt, a correlation was seen between their cell culture activities for the A/HK/7/87 virus (EC50 values: 1.6 μM for 14a and 7.9 μM for 14b) and their IC50 values against A/M2 wt proton channel function. This was, however, not the case for the amine 14d and for the guanidines 16a,b,d. These four compounds had quite pronounced cytotoxicity in the MDCK cells in our three-day CPE reduction assay (i.e. minimum cytotoxic concentrations of 8 μM or lower), and this may have masked the potential inhibitory effect of the compounds towards the A/HK/7/87 virus (Table 2).
It is difficult to speculate on the cause of the toxicity. These are amphiphilic compounds that might well cause a membrane disrupting effect given sufficient time of exposure. The CPE test is a 3-day assay and, hence, some compounds may display toxic effects that make it impossible to assess the potential antiviral effect. On the other hand, compounds with favorable activity and selectivity are easily identified in the CPE assay, i.e. 14a and 14b.
We therefore evaluated amine 14d and the guanidines 16a,b,d in a virus yield assay with strain A/HK/7/87 (carrying a wt A/M2), in which the virus released in the supernatant at 24 hours after infection was quantified by real-time RT-PCR.36 As shown in Table 3, amine 14d and guanidines 16a and 16d had an EC90 value (i.e. concentration causing 10-fold reduction in virus yield) below 1 μM, which is the same order of magnitude as the values noted for Amt and rimantadine. Of these, 16a and Amt were able to afford a 100-fold reduction in virus yield, with EC99 values of ~1 μM.
Table 3.
Compound | Activitya (μM) against A/HK/7/87
|
Cytotoxicity at 24 hr
|
|
---|---|---|---|
EC90 (μM) | EC99 (μM) | MCC (μM)b | |
16a | 0.46 | 0.79 | >50 |
16b | 20 | ≥38 | >50 |
14d | 0.85 | >10 | >50 |
16d | 0.37 | >2 | ≥10 |
Amt | 0.22 | 1.1 | ≥500 |
Rimantadine | 0.10 | >4 | ≥500 |
Ribavirin | 4.6 | 11 | >100 |
Antiviral activity was determined by a qRT-PCR based virus yield assay to quantify the virus in the supernatant at 24 post infection.35 EC90 and EC99: concentrations causing 1 log10 and 2 log10 reduction in virus yield, respectively.
MCC: minimum cytotoxic concentration, or concentration producing minimal alterations in cell morphology after 24 hr incubation with compound.
Conclusions
The present works showed that, starting from compounds active against the wt A/M2 channel it is possible to design compounds active against both the wt and the V27A mutant A/M2 channels. In fact, some of them inhibit both channels more effectively than amantadine inhibits the wt. The low micromolar antiviral activity of the three dual inhibitors identified, amine 14d and guanidines 16a and 16d, was confirmed by an influenza virus yield assay. Interestingly, the compounds reported here are the first examples of non-adamantane derivatives endowed with low micromolar activity against the V27A/M2 mutant channel, opening the way to the design of novel M2 inhibitors structurally based on non-adamantane scaffolds. Taking into account the broad utility of the adamantane scaffold in medicinal chemistry, the novel azapolycyclic ring reported here may be of interest for other therapeutic areas where the adamantane derivatives are of medicinal interest.
Experimental Section
Plasmid, mRNA synthesis, and microinjection of oocytes
The cDNA encoding the influenza A/Udorn/72 (A/M2) was inserted into pGEM3 vector for the expression on oocyte plasma membrane. A/M2 S31N and A/M2 V27A mutants were generated by QuikChange site-directed mutagenesis kit (Agilent Technologies). The synthesis of mRNA and microinjection of oocytes have been described previously.37
Two-electrode voltage clamp analysis
Macroscopic membrane current was recorded 48–72 hours after injection as described previously.13 The tested compounds were applied at pH 5.5 at various concentrations when the inward current reaches maximum. The compounds were applied for 2 min, and residual membrane current was compared with the membrane current before the application of compounds. Membrane currents were analyzed with pCLAMP 10.0 software package (Axon Instruments, Sunnyvale, CA).
NMR of drug titration
The M2TM peptide corresponding to the transmembrane domain of the Udorn M2, SSDPLVVAASIIGILHLILWILDRL, was synthesized using an optimized protocol as described before.34 The NMR sample was prepared starting from mixing peptide and DPC in the desired molar ratio in ethanol, followed by removal of ethanol by nitrogen flush and lyphilization to ensure completely removal. The resulting film was dissolved in NMR buffer consisting of 50 mM sodium phosphate in 10% D2O and 90% H2O, pH 7.5. Drug, 16d, was dissolved in H2O and added to the NMR sample gradually. The final dilution was less than 2%.
Cell culture assays for antiviral activity and cytotoxicity
The antiviral activity of the compounds was determined in established CPE reduction assays, using a diverse set of DNA and RNA viruses as indicated, and including three (sub)types of influenza virus: A/Puerto Rico/8/34 (A/H1N1); A/Hong Kong/7/87 (A/H3N2) and B/Hong Kong/5/72.38–39 Briefly, Madin-Darby canine kidney cells seeded in 96-well plates were exposed to influenza virus [multiplicity of infection: 50 CCID50 (50% cell culture infective dose) per well] together with the test compounds. After three days incubation at 35 °C, microscopy was performed to score the virus-induced cytopathic effect (CPE) as well as compound cytotoxicity. These data were confirmed by the colorimetric formazan-based MTS cell viability assay. Antiviral activity was expressed as the EC50 value, or compound concentration producing 50% inhibition of the virus-induced CPE, as determined by microscopy or MTS assay. Compound cytotoxicity was expressed as the minimum inhibitory concentration (MCC), i.e. the concentration producing minimal changes in cell morphology, or the CC50 value, i.e. the concentration causing 50% reduction in cell viability by MTS assay.
To determine the effect of the compounds on virus yield, MDCK cells were incubated with influenza virus (strain A/HongKong/7/87) and compounds as above. After 24 hr incubation the supernatants were collected and frozen. The virus released in these supernatants was quantified by real-time qRT-PCR, as described.36 Antiviral activity was expressed as the EC90 or EC99 value, i.e. the compound concentration producing a virus yield reduction of 1 log10 or 2 log10, respectively.
Chemical Synthesis. General Methods
Melting points were determined in open capillary tubes with a MFB 595010M Gallenkamp melting point apparatus. 300 MHz 1H/75.4 MHz 13C NMR spectra, 400 MHz 1H/100.6 MHz 13C NMR spectra, and 500 MHz 1H NMR spectra were recorded on Varian Gemini 300, Varian Mercury 400, and Varian Inova 500 spectrometers, respectively. The chemical shifts are reported in ppm (δ scale) relative to internal tetramethylsilane, and coupling constants are reported in Hertz (Hz). Assignments given for the NMR spectra of the new compounds have been carried out on the basis of DEPT, COSY 1H/1H (standard procedures), and COSY 1H/13C (gHSQC and gHMBC sequences) experiments. An asterisk (*) in the NMR data means interchangeable signals. IR spectra were run on a Perkin-Elmer Spectrum RX I spectrophotometer. Absorption values are expressed as wave-numbers (cm−1); only significant absorption bands are given. The GC/MS analysis was carried out in an inert Agilent Technologies 5975 gas chromatograph equipped with an Agilent 122-5532 DB-5MS 1b (30 m × 0.25 mm) capillary column with a stationary phase of phenylmethylsilicon (5% diphenyl – 95% dimethylpolysiloxane), using the following conditions: initial temperature of 50 °C (1 min), with a gradient of 10 °C/min up to 300 °C, and a temperature in the source of 250 °C. Solvent Delay (SD) of 4 minutes and a pressure of 7,35 psi. Column chromatography was performed on silica gel 60 A C.C (35–70 mesh, SDS, ref 2000027). Thin-layer chromatography was performed with aluminum-backed sheets with silica gel 60 F254 (Merck, ref 1.05554), and spots were visualized with UV light and 1% aqueous solution of KMnO4. The analytical samples of all of the new compounds which were subjected to pharmacological evaluation possessed a purity ≥95% as evidenced by their elemental analyses.
7,8-Dimethyl-3-azatetracyclo[5.2.1.15,8.01,5]undeca-2,4-dione (13a)
A mixture of known23 diacid 12a (3.0 g, 13.4 mmol) and urea (4.2 g, 95% purity, 67.0 mmol) was heated slowly to 135 °C. When the mixture melted it was heated to 180 °C for 30 min and cooled. Water (66 mL) was added and the suspension was extracted with CH2Cl2 (6×40 mL). The combined organic extracts were washed with brine (1×45 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuo to dryness to give imide 13a as a white solid (2.07 g, 75% yield). An analytical sample of 13a was obtained by crystallization from CHCl3, mp 209–210 °C; IR (KBr) ν 3194 (N-H), 1766 and 1711 (C=O st) cm−1; 1H NMR (400 MHz, CDCl3) δ 1.23 [s, 6 H, C7(8)-CH3], 1.88 [dd, J = 9.8 Hz, J′ = 1.9 Hz, 4 H, 6(9,10,11)-Hα], 1.92 [dd, J = 9.8 Hz, J′ = 2.0 Hz, 4 H, 6(9,10,11)-Hβ], 8.24 (bs, 1 H, NH); 13C NMR (100.6 MHz, CDCl3) δ 16.1 [CH3, C7(8)-CH3], 51.8 [C, C7(8)], 55.2 [CH2, C6(9,10,11)], 57.5 [(C, C1(5)], 177.4 (C, CO). GC/MS (EI), m/e (%): 205 (M·+, 4), 134 (83), 120 (100), 119 (53), 150 (48), 117 (10), 105 (17), 92 (22), 91 (38), 79 (15), 77 (23). HRMS-ESI+ m/z [M+H]+ calcd for [C12H15NO2+H]+: 206.1176, found: 206.1185.
7,8-Dimethyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (14a•HCl)
To a stirred solution of imide 13a (0.36 g, 1.8 mmol) in anhydrous toluene (8 mL) at 0 °C, sodium bis-(2-methoxyethoxy)aluminium hydride (2.7 mL, 65% in toluene, 8.8 mmol) was added dropwise. When the addition was finished, the solution was heated under reflux for 72 h. The mixture was cooled to 0 °C (ice-water bath), treated with 30% aq solution of KOH til basic pH and stirred at room temperature for 1 h. The organic layer was separated and the aqueous one was extracted with CH2Cl2 (3×15 mL). The combined organic layers were dried with anhydrous Na2SO4, filtered and evaporated in vacuo. The obtained solid residue was dissolved in Et2O (20 mL) and treated with excess of HCl in Et2O to give the hydrochloride of 14a (0.41 g, 99% yield) as a solid that was collected by filtration. An analytical sample of 14a•HCl was obtained as a white solid by crystallization from MeOH/Et2O, mp 248–249 °C; IR (KBr) ν 3527, 2953, 2883, 2767, 2702, 2588, 2536, 2413, 2241, 1902, 1610, 1594, 1508, 1483, 1457, 1444, 1379, 1363, 1297, 1260, 1183, 983, 871 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.19 [s, 6 H, C7(8)-CH3], 1.67 [m, 8 H, 6(9,10,11)-H2], 3.26 [bs, 4 H, C2(4)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 16.7 [CH3, C7(8)-CH3], 47.5 [CH2, C2(4)], 52.4 [C, C7(8)], 56.6 [CH2, C6(9,10,11)], 58.7 [C, C1(5)]. MS (EI), m/e (%): 177 (M·+, 6), 135 (21), 134 (C10H14·+, 100), 133 (35), 122 (29), 119 (22), 107 (22), 106 (35), 105 (48), 93 (32), 92 (21), 91 (64), 80 (23), 79 (24), 77 (34), 55 (21).
3,7,8-Trimethyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (15a•HCl)
To a suspension of 14a (0.5 g, 2.4 mmol) in acetonitrile (10 mL), NaBH3CN (95% content, 0.46 g, 6.9 mmol), AcOH (0.4 mL) and formaldehyde (37% aqueous solution 0.6 mL, 7.3 mmol) were added and the mixture was magnetically stirred at room temperature for 8 h. Then, more NaBH3CN (95% content, 0.46 g, 6.9 mmol) and formaldehyde (37% aqueous solution 0.6 mL, 7.3 mmol) were added and stirring at room temperature was continued for 18 h more. The mixture was concentrated in vacuo, the residue was suspended in water (20 mL) and the solution was made basic with aqueous solution of 2 N NaOH (4 mL) and extracted with EtOAc (3×20 mL). The combined organic extracts were dried (anhydrous Na2SO4), filtered, treated with an excess of an ethereal solution of HCl and concentrated in vacuo to give the hydrochloride of 15a (0.4 g, 73% yield) as a white solid. An analytical sample of 15a•HCl was obtained by crystallization from 2-propanol, mp 280–281 °C (dec.); IR (KBr) ν 3384, 3007, 2953, 2882, 2591, 2564, 2474, 2449, 1644, 1480, 1462, 1446, 1419, 1378, 1349, 1293, 1257, 1248, 1193, 1173, 1123, 1105, 1068, 1025, 967, 893 cm−1; 1H NMR (500 MHz, CDCl3) δ 1.09 (s, 3 H) and 1.11 (s, 3 H) (C7-CH3 and C8-CH3), 1.47 [d, J = 8.5 Hz, 2 H, 9(11)-Hα], 1.52 [dd, J = 7.2 Hz, J′ = 2.0 Hz, 2 H, 6(10)-Hβ], 1.63 [d, J = 8.0 Hz, 2 H, 6(10)-Hα], 2.18 [dd, J = 8.0 Hz, J = 2.0 Hz, 2 H, 9(11)-Hβ], 2.79 [m, 2 H, C2(4)-Ha], 2.82 (d, J = 3.5 Hz, 3 H, N-CH3), 3.64 [d, J = 7.5 Hz, 2 H, C2(4)-Hb] and 12.65 (bs, 1H, NH); 13C NMR (125.7 MHz, CDCl3) δ 16.0 (CH3) and 16.2 (CH3) (C7-CH3) and (C8-CH3), 40.7 (CH3, N-CH3), 50.2 (C, C7),* 51.9 (C, C8),* 54.7 [CH2, C9(11)],* 56.3 [CH2, C6(10)],* 56.5 [CH2, C2(4)], 57.2 [C, C1(5)]. MS (EI), m/e (%): 191 (M·+, 43), 190 (40), 148 (100), 136 (35), 134 (32), 133 (31), 107 (22), 106 (28), 105 (28), 94 (20), 91 (41), 77 (21), 58 (50), 57 (37).
3-Amidino-7,8-dimethyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (16a•HCl)
A suspension of 14a•HCl (0.37 g, 1.73 mmol), Et3N (0.44 mL, 2.79 mmol) and 1H-pyrazole-1-carboxamidine hydrochloride (0.31 g, 2.11 mmol) in CH3CN (5 mL) was heated at 70 °C for 6 h. Then, the suspension was allowed to stand overnight in the freezer (4 °C) and the solid was separated by filtration in vacuo and washed with diethyl ether to give 16a•HCl as a beige solid (450 mg, 61% yield), mp 276–277 °C (dec). IR (KBr) ν 3295, 3093, 2937, 2876, 2723, 1634, 1531, 1478, 1456, 1361, 1293, 1189, 1161, 1133, 1116, 1045, 955, 737, 604, 540 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.18 [s, 6 H, C7(8)-CH3], 1.63 [d, J = 6.9 Hz, 4 H, 6(9,10,11)-Hα], 1.69 [d, J = 6.9 Hz, 4 H, 6(9,10,11)-Hβ], 3.49 [s, 4 H, C2(4)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 16.7 [CH3, C7(8)-CH3], 49.5 [CH2, C2(4)], 52.3 [C, C7(8)], 58.0 [CH2, C6(9,10,11)], 58.4 [C, C1(5)], 156.7 (C, C=N). MS (EI), m/e (%): 220 (54), 219 (M·+, 41), 166 (66), 165 (100), 164 (68), 163 (23), 145 (33), 134 (C10H14·+, 29), 133 (21), 123 (23), 122 (26), 120 (23), 119 (24), 114 (26), 113 (34), 112 (24), 107 (23), 106 (29), 105 (65), 91 (58), 79 (22), 77 (31), 74 (41), 73 (51), 72 (23).
3-azatetracyclo[5.2.1.15,8.01,5]undeca-2,4-dione (13b)
From known24 diacid 12b (0.5 g, 2.6 mmol) and urea (0.8 g, 95% purity, 12.7 mmol) and following the same procedure as reported for 13a, imide 13b was obtained as a white solid (0.33 g, 73% yield). An analytical sample of 13b was obtained by crystallization from CH2Cl2, mp 131–132 °C; IR (KBr) ν 3189 (N-H), 1749 and 1715 (C=O st), 1346, 1135, 1054, 833 cm−1; 1H NMR (400 MHz, CDCl3) δ 1.85 [dd, J = 9.6 Hz, J′ = 2.4 Hz, 4 H, 6(9,10,11)-Hα], 2.05 [dd, J = 7.6 Hz, J′ = 1.6 Hz, 4 H, 6(9,10,11)-Hβ], 2.68 [m, 2 H, 7(8)-H], 7.74 (bs, 1 H, NH); 13C NMR (100.6 MHz, CDCl3) δ 40.3 [CH, C7(8)], 49.5 [CH2, C6(9,10,11)], 57.1 [C, C1(5)], 176.8 (C, C=O). GC/MS (EI), m/e (%): 177 (M·+, 3), 106 (100), 105 (21), 93 (13), 92 (22), 91 (39), 79 (10), 78 (22), 77 (12), 65 (16). HRMS-ESI− m/z [M−H]− calcd for [C10H11NO2–H]−: 176.0717, found: 176.0725.
3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (14b•HCl)
To a stirred solution of imide 13b (0.41 g, 2.3 mmol) in anhydrous THF (15 mL) at 0 °C, LiAlH4 (0.9 g, 23.1 mmol) was added portionwise. When the addition was finished, the solution was heated under reflux for 72 h. The mixture was cooled to 0 °C (ice-water bath), treated with 10 N aq solution of NaOH til basic pH (8 mL) and stirred at room temperature for 1 h. The mixture was filtered through Celite® and the filtrate was thoroughly washed with CH2Cl2. The organic layer was separated, dried with anhydrous Na2SO4, filtered and evaporated in vacuo. The obtained solid residue was dissolved in Et2O (20 mL) and treated with excess of HCl in Et2O to give the hydrochloride of 14b (0.32 g, 75% yield). An analytical sample of 14b•HCl was obtained as a white solid by crystallization from MeOH/Et2O, mp 218–219 °C; IR (KBr) ν 3421, 2989, 2961, 2887, 2739, 2530, 2493, 1560, 1481, 1458, 1450, 1420, 1388, 1353, 1294, 1248, 1228, 1115, 1082, 1007, 988, 949, 924, 901, 881, 853, 771, 657, 604, 495 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.60 [broad d, J = 7.6 Hz, 4 H, 6(9,10,11)-Hα], 1.76 [dd, J = 7.6 Hz, J′ = 2.0 Hz, 4 H, 6(9,10,11)-Hβ], 2.48 [m, 2 H, 7(8)-H], 3.32 [bs, 4 H, C2(4)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 41.3 [CH, C7(8)], 47.0 [CH2, C2(4)], 50.2 [CH2, C6(9,10,11)], 58.3 [C, C1(5)]. MS (EI), m/e (%): 149 (M·+, 29), 108 (53), 107 (C8H11+, 100), 106 (29), 105 (30), 95 (31), 94 (86), 92 (26), 91 (46), 80 (27), 79 (62), 77 (37), 71 (21), 70 (20).
3-Methyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (15b•HCl)
To a suspension of 14b (0.32 g, 2.1 mmol) in acetonitrile (13 mL), NaBH3CN (95% content, 0.28 g, 4.3 mmol), AcOH (1.2 mL) and formaldehyde (37% aqueous solution, 1.1 mL, 14.1 mmol) were added and the mixture was magnetically stirred at room temperature for 8 h. Then, more NaBH3CN (95% content, 0.28 g, 4.3 mmol) and formaldehyde (37% aqueous solution 1.1 mL, 14.1 mmol) were added and stirring at room temperature was continued for 18 h more. The mixture was concentrated in vacuo, the residue was suspended in water (20 mL) and the solution was made basic with aqueous solution of 2 N NaOH (4 mL) and extracted with EtOAc (3×25 mL). The combined organic extracts were dried (anhydrous Na2SO4), filtered, treated with an excess of an ethereal solution of HCl and concentrated in vacuo to give the hydrochloride of 15b (0.24 g, 70% yield) as a white solid. An analytical sample of 15b•HCl was obtained by crystallization from MeOH/Et2O, mp 223–224 °C (dec.); IR (KBr) ν 3003, 2962, 2889, 2572, 2462, 1628, 1508, 1482, 1465, 1349, 1293, 1269, 1228, 1177, 1129, 1106, 1079, 1060, 965, 890 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.61 (dd, J = 8.2 Hz, J′ = 3.3 Hz, 2 H), 1.60–1.73 (complex signal, 4 H) and 1.79 (dd, J = 8.5 Hz, J = 2.4 Hz, 2H) [C6(10)-H2 and C9(11)-H2], 2.46 [m, 2H, C7(8)-H], 2.96 (s, 3H, N-CH3), 3.18 (d, J = 12.0 Hz, 2 H) and 3.70 [d, J = 12.0 Hz, 2 H) [C2(4)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 39.9 [CH, C7(8)], 40.7 (CH3, N-CH3), 41.7 [CH, C7(8)], 49.7 [CH2, C9(11)],* 50.5 [CH2, C6(10)]*, 57.3 [CH2, C2(4)], 58.0 [C, C1(5)]. MS (EI), m/e (%): 163 (M·+, 57), 162 (100), 121 (26), 120 (35), 108 (30), 105 (11), 94 (13), 91 (19), 79 (17), 77 (14), 58 (22). HRMS-ESI+ m/z [M+H]+ calcd for [C11H17N+H]+: 164.1434, found: 164.1432.
3-Amidino-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (16b•HCl)
From a suspension of 14b•HCl (0.13 g, 0.7 mmol), Et3N (0.17 mL, 1.08 mmol) and 1H-pyrazole-1-carboxamidine hydrochloride (0.12 g, 0.8 mmol) in CH3CN (5 mL) and following the same procedure as reported for 16a•HCl, guanidine 16b•HCl was obtained as a beige solid (150 mg, 96% yield), mp 254–255 °C (dec) (CH2Cl2). IR (KBr) ν 3401, 3323, 3153, 2981, 2966, 2933, 2886, 1652, 1635, 1615, 1471, 1456, 1373, 1297, 1196, 1085, 565 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.55 [broad d, J = 7.2 Hz, 4 H, 6(9,10,11)-Hα], and 1.79 [broad d, J = 8.8 Hz, 4 H, 6(9,10,11)-Hβ], 2.44 [s, 2 H, C7(8)], 3.55 [s, 4 H, C2(4)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 41.2 [CH, C7(8)], 48.9 [CH2, C2(4)], 51.5 [CH2, C6(9,10,11)], 57.8 [C, C1(5)], 156.7 (C, C=NH). MS (EI), m/e (%): 194 (43), 193 (40), 192 [(M+H)+, 14], 153 (22), 152 (84), 151 (67), 150 (28), 139 (100), 138 (62), 117 (44), 115 (53), 114 (35), 109 (27), 108 (29), 107 (53), 106 (29), 105 (23), 96 (32), 95 (54), 94 (26), 92 (25), 91 (73), 81 (25), 80 (24), 79 (54), 78 (28), 77 (65), 75 (32), 74 (23), 71 (20), 65 (24), 63 (25), 53 (26). Anal. Calcd. for C11H17N3·HCl (227.73): C 58.01, H 7.97, N 18.45. HRMS-ESI+ m/z [M+H]+ calcd for [C11H17N3+H]+: 192.1495, found: 192.1494.
7,8-Diethyl-3-azatetracyclo[5.2.1.15,8.01,5]undeca-2,4-dione (13c)
From diacid 12c (1.12 g, 4.44 mmol) and urea (1.33 g, 22.2 mmol) and following the same procedure as reported for 13a, imide 13c was obtained as a white solid (0.91 g, 87% yield). An analytical sample of 13b was obtained by crystallization from CH2Cl2/n-pentane, mp 204–205 °C; IR (KBr) ν 3404, 3198, 3072, 2962, 1761, 1707, 1464, 1353, 1210, 1143, 1061, 830, 725, 618, 506 cm−1; 1H NMR (400 MHz, CDCl3) δ 0.92 [t, J = 7.6 Hz, 6 H, C7(8)-CH2CH3], 1.63 [q, J = 7.6 Hz, 4 H, C7(8)-CH2CH3], 1.80 [broad d, J = 7.2 Hz, 4 H, 6(9,10,11)-Ha], 1.96 [broad d, J = 7.2 Hz, 4 H, 6(9,10,11)-Hb], 8.13 (broad s, 1H, NH); 13C NMR (100.6 MHz, CDCl3) δ 10.0 [CH3, C7(8)-CH2CH3], 22.8 [CH2, C7(8)-CH2CH3], 52.1 [CH2, C6(9,10,11)], 56.6 [C, C7(8)], 57.2 [C, C1(5)], 177.7 (C, CO). GC/MS, m/z (%); main ions: 233 (M·+, 34), 163 (16), 162 (96), 148 (100), 147 (20), 133 (80), 106 (18), 105 (35), 91 (40), 77 (16). HRMS-ESI+ m/z [M+H]+ calcd for [C14H19NO2+H]+: 234.1489, found: 234.1499.
7,8-Diethyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane (2R,3R)-tartrate, [14c•(2R,3R)- tartrate]
To a stirred solution of imide 13c (907 mg, 3.89 mmol) in anhydrous toluene (32 mL) at 0 °C, sodium bis-(2-methoxyethoxy)aluminium hydride (5.95 mL, 65% solution in toluene, 5.95 mmol) was added dropwise. When the addition was finished, the solution was heated under reflux for 72 h. The mixture was cooled to 0 °C (ice-water bath), treated with 30% aq solution of KOH til basic pH and stirred at room temperature for 1 h. The organic layer was separated and the aqueous one was extracted with CH2Cl2 (3×30 mL). The combined organic layers were dried with anhydrous Na2SO4, filtered and evaporated in vacuo to give amine 14c as an orange oil (326 mg). The amine was dissolved in methanol (5 mL) and treated with (2R,3R)-tartaric acid (170 mg, 1.13 mmol) dissolved in the minimum amount of methanol. The mixture was concentrated in vacuo to yield 14c as its (2R,3R)-tartrate as a yellow solid (459 mg, 33% yield). An analytical sample of 14c•(2R,3R)-tartrate was obtained by crystallization from MeOH/Et2O, mp 165–166 °C. IR (KBr) ν 3422, 3321, 2958, 2882, 1718, 1585, 1455, 1407, 1303, 1263, 1210, 1130, 1068, 899, 834, 784, 680, 618 cm−1; 1H NMR (400 MHz, CD3OD) δ 0.93 [t, J = 7.6 Hz, 6 H, C7(8)-CH2CH3], 1.53 [broad d, J = 7.2 Hz, 4 H, 6(9,10,11)-Ha], 1.61 [q, J = 7.6 Hz, 4 H, C7(8)-CH2CH3], 1.76 [broad d, J = 7.2 Hz, 4 H, 6(9,10,11)-Hb], 3.27 [s, 4 H, 2(4)-H2], 4.39 [s, 2 H, CH(OH)-CO2H]; 13C NMR (100.6 MHz, CD3OD) δ 10.5 [CH3, C7(8)-CH2CH3], 24.2 [CH2, C7(8)-CH2CH3], 47.6 [CH2, C2(4)], 53.3 [CH2, C6(9,10,11)], 57.9 [C, C1(5)]*, 58.0 [C, C7(8)]*, 74.4 [CH, CH(OH)], 177.6 (C, CO2H). GC/MS, m/z (%); main ions: 205 [(C14H23N)·+, 7], 190 (11), 176 (16), 163 (21), 162 (100), 161 (14), 147 (27), 136 (20), 133 (21), 120 (15), 119 (21), 107 (15), 105 (23), 91 (37).
3-Amidino-7,8-diethyl-3-azatetracyclo[5.2.1.15,8.01,5]undecane hydrochloride (16c•HCl)
From a suspension of 14c•HCl (459 mg, 1.29 mmol), Et3N (0.30 mL, 2.06 mmol) and 1H-pyrazole-1-carboxamidine hydrochloride (226 mg, 1.54 mmol) in CH3CN (10 mL) and following the same procedure as reported for 16a•HCl, guanidine 16c•HCl was obtained as a yellow solid (242 mg, 76% yield). An analytical sample was obtained by crystallization from t-butanol, mp 231–232 °C (dec). IR (KBr) ν 3291, 3220, 3173, 3102, 2957, 2877, 2364, 2337, 1603, 1556, 1455, 1369, 1290, 1112, 1077, 946, 899, 677 cm−1; 1H NMR (400 MHz, CD3OD) δ 0.93 [t, J = 7.6 Hz, 6 H, C7(8)-CH2CH3], 1.58 [broad d, J = 6.6 Hz, 4 H, 6(9,10,11)-Ha], 1.61 [q, J = 7.6 Hz, 4 H, C7(8)-CH2CH3], 1.72 [broad d, J = 6.6 Hz, 4 H, 6(9,10,11)-Hb], 3.51 [s, 4 H, 2(4)-H]; 13C NMR (100.6 MHz, CD3OD) δ 10.5 [CH3, C7(8)-CH2CH3], 24.2 [CH2, C7(8)-CH2CH3], 49.8 [CH2, C2(4)], 54.6 [CH2, C6(9,10,11)], 57.5 [C, C1(5)]*, 57.9 [C, C7(8)]*, 156.7(C, C=NH). MS, m/z (%); main ions: 247 (C15H25N3·+, 34), 246 (26), 232 (100), 192 (33), 178 (33), 177 (20), 162 (18), 159 (14), 119 (28), 112 (24), 105 (20), 91 (35), 79 (15), 72 (68).
12-Azapentacyclo[6.5.1.13,10.01,10.03,8]pentadeca-11,13-dione (13d)
From diacid 12d (520 mg, 2.10 mmol) and urea (624 mg, 10.4 mmol) and following the same procedure as reported for 13a, imide 13d was obtained as a white solid (400 mg, 83% yield). An analytical sample of 13d was obtained by crystallization from CH2Cl2/n-pentane, mp 202–203 °C; IR (ATR) ν 3404, 3189, 3079, 2934, 1758, 1706, 1473, 1396, 1354, 1213, 1140, 1061, 840, 733, 618 cm−1; 1H NMR (400 MHz, CDCl3) δ 1.58 [m, 4 H, 5(6)-H2], 1.70 [m, 4 H, 4(7)-H2], 1.83 [d, J = 7.2 H, 4 H, 2(9,14,15)-Ha], 1.99 [d, J = 7.2 Hz, 4 H, 2(9,14,15)-Hb], 8.09 [broad s, 1 H, NH]; 13C NMR (100.6 MHz, CDCl3) δ 18.7 [CH2, C5(6)], 25.5 [CH2, C4(7)], 52.2 [C, C3(8)], 53.0 [CH2, C2(9,14,15)], 56.9 [C, C1(10)], 177.5 [C, C11(13)]. MS, m/z (%); main ions: 231 (M·+, 27), 160 (23), 146 (100), 145 (49), 131 (15), 118 (21), 117 (35), 91 (31). HRMS-ESI+ m/z [M+H]+ calcd for [C14H17NO2+NH4]+: 249.1598, found: 249.1607.
12-Azapentacyclo[6.5.1.13,10.01,10.03,8]pentadecane (2R,3R)-tartrate, [14d•(2R,3R)-tartrate]
From imide 13d (378 mg, 1.51 mmol) in dry toluene (14 mL) and sodium bis-(2-methoxyethoxy)aluminium hydride (2.30 mL, 65% solution in toluene, 7.55 mmol) and following the same procedure as reported for 14c•(2R,3R)-tartrate, amine 14d as its (2R,3R)-tartrate was obtained as a pale yellow solid (442 mg, 83% yield). An analytical sample of 14d•(2R,3R)-tartrate was obtained by crystallization from CH2Cl2/CH3OH, mp 124–125 °C. IR (KBr) ν 3377, 2931, 2542, 2360, 1715, 1585, 1475, 1450, 1351, 1296, 1118, 1069, 983, 897, 834, 690 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.57–1.72 [complex signal, 12 H, 5(6)-H2, 4(7)-H2 and 2(9,14,15)-Ha], 1.75 [broad d, J = 6.8 Hz, 4 H, 2(9,14,15)-Hb], 3.27 [s, 4 H, 11(13)-H2], 4.36 [s, 2 H, CH(OH)-CO2H]; 13C NMR (100.6 MHz, CD3OD) δ 20.0 [CH2, C5(6)], 26.8 [CH2, C4(7)], 47.3 [CH2, C11(13)], 52.9 [C, C3(8)], 54.3 [CH2, C2(9,14,15)], 58.2 [C, C3(8)], 74.7 (CH, CH(OH)], 178.2 (C, CO2H). GC/MS, m/z (%); main ions: 203 [(C14H21N)·+, 62], 202 (43), 188 (100), 175 (21), 160 (39), 148 (77), 146 (28), 134 (95), 133 (43), 132 (34), 131 (33), 121 (79), 120 (36), 119 (26), 118 (23), 117 (40), 106 (24), 105 (29), 94 (19), 93 (19), 92 (20), 91 (79), 82 (26), 80 (29), 79 (29), 77 (30), 70 (29). HRMS-ESI+ m/z [M+H]+ calcd for [C14H21N+H]+: 204.1747, found: 204.1748.
12-Amidino-12-azapentacyclo[6.5.1.13,10.01,10.03,8]pentadecane hydrochloride (16d•HCl)
From a suspension of 14d (249 mg, 1.22 mmol), Et3N (0.14 mL, 0.98 mmol) and 1H-pyrazole-1-carboxamidine hydrochloride (215 mg, 1.47 mmol) in CH3CN (9.5 mL) and following the same procedure as reported for 16a•HCl, guanidine 16d•HCl was obtained as a yellow solid (215 mg, 63% yield). An analytical sample was obtained by crystallization from t-butanol, mp 254–255 °C (dec). IR (ATR) ν 3303, 3178, 2926, 2871, 2371, 1647, 1616, 1464, 1361, 1293, 1127, 1035, 958, 929, 775, 701, 609, 559 cm−1; 1H NMR (400 MHz, CD3OD) δ 1.55–1.65 [complex signal, 8 H, 5(6)-H2 and 2(9,14,15)-Ha], 1.69 [m, 4 H, 4(7)-H2], 1.80 [broad d, J = 6.8 Hz, 4 H, 2(9,14,15)-Hb], 3.50 [s, 4 H, 11(13)-H2]; 13C NMR (100.6 MHz, CD3OD) δ 20.0 [CH2, C5(6)], 26.8 [CH2, C4(7)], 49.4 [CH2, C11(13)], 52.8 [C, C3(8)], 55.6 [CH2, C2(9,14,15)], 57.8 [CH2, C1(10)], 156.7 (C, CN). MS, m/z (%); main ions: 245 [(C15H23N3)·+, 91], 230 (39), 217 (72), 190 (100), 171 (21), 162 (58), 148 (38), 143 (23), 131 (31), 129 (25), 120 (30), 117 (27), 112 (56), 111 (27), 105 (27), 91 (69), 79 (29), 77 (32), 72 (39), 60 (30).
Supplementary Material
Acknowledgments
ET and SV thank the Spanish Ministerio de Ciencia e Innovación (FPU fellowship to ET; grant CTQ2011-22433 to SV) and the Generalitat de Catalunya (grant SCG-2009-294) for financial support. MRC thanks the Govern d’Andorra for a PhD grant. LN acknowledges financial support from the Geconcerteerde Onderzoeksacties (GOA/10/014), and the technical assistance from W. van Dam. WFD acknowledges support from GM56423 from the NIH.
ABBREVIATIONS
- Amt
amantadine
- BSA
bovine serum albumin
- CD
circular dichroism
- DMEM
Dulbecco’s modified eagle medium
- DMPC
dimyristoylphosphatidylcholine
- DPC
dodecylphosphocholine
- LiHMDS
Lithium bis(trimethylsilyl)amide
- MDCK
Madin-Darby Canine Kidney
- MD
molecular dynamics
- MTS
3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium
- NMR
Nuclear Magnetic Resonance
- PBS
phosphate buffered saline
- TEV
two-electrode voltage clamps
- TM
transmembrane
- wt
wild-type
Footnotes
Author Contributions
The manuscript was written through contributions of all authors. All authors have given approval to the final version of the manuscript.
Notes
The authors declare no competing financial interest.
Supporting Information. Figure S1 and Table S1 (NMR titration assay). Experimental procedures and characterization data for compounds 12c-d and 18c-d to 22c-d. Table with the elemental analysis data of the new compounds. This material is available free of charge via the Internet at http://pubs.acs.org.
References
- 1.Lamb RA, Zebedee SL, Richardson CD. Influenza virus M2 protein is an integral membrane protein expressed on the infected-cell surface. Cell. 1985;40:627–633. doi: 10.1016/0092-8674(85)90211-9. [DOI] [PubMed] [Google Scholar]
- 2.Lamb RA, Lai CJ, Choppin PW. Sequences of mRNAs derived from genome RNA segment 7 of influenza virus: colinear and interrupted mRNAs code for overlapping proteins. Proc Natl Acad Sci USA. 1981;78:4170–4174. doi: 10.1073/pnas.78.7.4170. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.Takeda M, Pekosz A, Shuck K, Pinto LH, Lamb RA. Influenza a virus M2 ion channel activity is essential for efficient replication in tissue culture. J Virol. 2002;76:1391–1399. doi: 10.1128/JVI.76.3.1391-1399.2002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Vanderlinden E, Naesens L. Emerging antiviral strategies to interfere with influenza virus entry. Med Res Rev. 2013;33 doi: 10.1002/med.21289. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Zhirnov OP. Solubilization of matrix protein M1/M from virions occurs at different pH for orthomyxo- and paramyxoviruses. Virology. 1990;176:274–279. doi: 10.1016/0042-6822(90)90253-n. [DOI] [PubMed] [Google Scholar]
- 6.Grambas S, Hay AJ. Maturation of influenza A virus hemagglutinin–estimates of the pH encountered during transport and its regulation by the M2 protein. Virology. 1992;190:11–18. doi: 10.1016/0042-6822(92)91187-y. [DOI] [PubMed] [Google Scholar]
- 7.Bright RA, Shay DK, Shu B, Cox NJ, Klimov AI. Adamantane resistance among influenza A viruses isolated early during the 2005–2006 influenza season in the United States. JAMA. 2006;295:891–894. doi: 10.1001/jama.295.8.joc60020. [DOI] [PubMed] [Google Scholar]
- 8.Fiore AE, Shay DK, Haber P, Iskander JK, Uyeki TM, Mootrey G, Bresee JS, Cox NJ. Prevention and control of influenza. Recommendations of the Advisory Committee on Immunization Practices (ACIP), 2007. MMWR Recomm Rep. 2007;56:1–54. [PubMed] [Google Scholar]
- 9.Moscona A. Global transmission of oseltamivir-resistant influenza. N Engl J Med. 2009;360:953–956. doi: 10.1056/NEJMp0900648. [DOI] [PubMed] [Google Scholar]
- 10.Baz M, Abed Y, Papenburg J, Bouhy X, Hamelin ME, Boivin G. Emergence of oseltamivir-resistant pandemic H1N1 virus during prophylaxis. N Engl J Med. 2009;361:2296–2297. doi: 10.1056/NEJMc0910060. [DOI] [PubMed] [Google Scholar]
- 11.Balannik V, Carnevale V, Fiorin G, Levine BG, Lamb RA, Klein ML, DeGrado WF, Pinto LH. Functional studies and modeling of pore-lining residue mutants of the influenza a virus M2 ion channel. Biochemistry. 2010;49:696–708. doi: 10.1021/bi901799k. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Furuse Y, Suzuki A, Oshitani H. Large-scale sequence analysis of M gene of influenza A viruses from different species: mechanisms for emergence and spread of amantadine resistance. Antimicrob Agents Chemother. 2009;53:4457–4463. doi: 10.1128/AAC.00650-09. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Balannik V, Wang J, Ohigashi Y, Jing X, Magavern E, Lamb RA, DeGrado WF, Pinto LH. Design and pharmacological characterization of inhibitors of amantadine-resistant mutants of the M2 ion channel of influenza A virus. Biochemistry. 2009;48:11872–11882. doi: 10.1021/bi9014488. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Wang J, Ma C, Fiorin G, Carnevale V, Wang T, Hu F, Lamb RA, Pinto LH, Hong M, Klein ML, DeGrado WF. Molecular dynamics simulation directed rational design of inhibitors targeting drug-resistant mutants of influenza A virus M2. J Am Chem Soc. 2011;133:12834–12841. doi: 10.1021/ja204969m. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Wang J, Ma C, Wu Y, Lamb RA, Pinto LH, DeGrado WF. Exploring organosilane amines as potent inhibitors and structural probes of influenza A virus M2 proton channel. J Am Chem Soc. 2011;133:13844–13847. doi: 10.1021/ja2050666. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Wang J, Wu Y, Ma C, Fiorin G, Wang J, Pinto LH, Lamb RA, Klein ML, DeGrado WF. Structure and inhibition of the drug-resistant S31N mutant of the M2 ion channel of influenza A virus. Proc Natl Acad Sci USA. 2013;110:1315–1320. doi: 10.1073/pnas.1216526110. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Wang J, Ma C, Wang J, Jo H, Canturk B, Fiorin G, Pinto LH, Lamb RA, Klein ML, DeGrado WF. Discovery of Novel Dual Inhibitors of the Wild-Type and the Most Prevalent Drug-Resistant Mutant, S31N, of the M2 Proton Channel from Influenza A Virus. J Med Chem. 2013;56:2804–2812. doi: 10.1021/jm301538e. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Williams JK, Tietze D, Wang J, Wu Y, DeGrado WF, Hong M. Drug-induced conformational and dynamical changes of the S31N mutant of the influenza M2 proton channel investigated by solid-state NMR. J Am Chem Soc. 2013;135:9885–9897. doi: 10.1021/ja4041412. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 19.Camps P, Duque MD, Vázquez S, Naesens L, De Clercq E, Sureda FS, López-Querol M, Camins A, Pallàs M, Prathalingam SR, Kelly JM, Romero V, Ivorra D, Cortés D. Synthesis and pharmacological evaluation of several ring-contracted amantadine analogs. Bioorg Med Chem. 2008;16:9925–9936. doi: 10.1016/j.bmc.2008.10.028. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Duque MD, Ma C, Torres E, Wang J, Naesens L, Juárez-Jiménez J, Camps P, Luque FJ, DeGrado WF, Lamb RA, Pinto LH, Vázquez S. Exploring the size limit of templates for inhibitors of the M2 ion channel of influenza A virus. J Med Chem. 2011;54:2646–2657. doi: 10.1021/jm101334y. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Torres E, Vanderlinden E, Fernández R, Miquet S, Font-Bardia M, Naesens L, Vázquez S. Synthesis and anti-influenza activity of 2,2-dialkylamantadines and related compounds. ACS Med Chem Lett. 2012;3:1065–1069. doi: 10.1021/ml300279b. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Torres E, Duque MD, Vanderlinden E, Ma C, Pinto LH, Camps P, Froeyen M, Vázquez S, Naesens L. Role of the viral hemagglutinin in the anti-influenza virus activity of newly synthesized polycyclic amine compounds. Antiviral Res. 2013;99:281–291. doi: 10.1016/j.antiviral.2013.06.006. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23.Camps P, Font-Bardia M, Pérez F, Solans X, Vázquez S. Synthesis, chemical trapping and dimerization of 3,7-dimethyltricyclo[3.3.0.03,7]oct-1(5)-ene: [2+2] retrocycloaddition of the cyclobutane dimer. Angew Chem, Int Ed Engl. 1995;34:912–914. [Google Scholar]
- 24.Camps P, Luque FJ, Orozco M, Pérez F, Vázquez S. Synthesis, chemical trapping and dimerization of tricyclo[3.3.0.03,7]oct-1(5)-ene, the consummate member of a series of pyramidalized alkenes. Tetrahedron Lett. 1996;37:8605–8608. [Google Scholar]
- 25.Pielak RM, Chou JJ. Solution NMR structure of the V27A drug resistant mutant of influenza A M2 channel. Biochem Biophys Res Commun. 2010;401:58–63. doi: 10.1016/j.bbrc.2010.09.008. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 26.Gu RX, Liu LA, Wang YH, Xu Q, Wei DH. Structural comparison of the wild-type and drug-resistant mutants of the influenza A M2 proton channel by molecular dynamics simulations. J Phys Chem B. 2013;117:6042–6051. doi: 10.1021/jp312396q. [DOI] [PubMed] [Google Scholar]
- 27.Ayats C, Camps P, Duque MD, Font-Bardia M, Muñoz MR, Solans X, Vázquez S. Alternative syntheses of the new D2d symmetric tetramethyl tricyclo[3.3.0.03,7]octane-1,3,5,7-tetracarboxylate. J Org Chem. 2003;68:8715–8718. doi: 10.1021/jo035062x. [DOI] [PubMed] [Google Scholar]
- 28.Makhseed S, McKeown NB. Novel spiro-polymers with enhanced solubility. Chem Commun. 1999:255–256. [Google Scholar]
- 29.Weiss U, Edwards JM. A one-step synthesis of ketonic compounds of the petalane [3.3.3]and - [4.3.3]propellane series. Tetrahedron Lett. 1968;47:4885–4887. [Google Scholar]
- 30.Bertz SH, Cook JM, Gawish A, Weiss U. Organic Syntheses. VII. Wiley; New York: 1990. Condensation of dimethyl 1,3-acetonedicarboxylate with 1,2-dicarbonyl compounds: cis-bicyclo[3.3.0]octane-3,7-diones; pp. 50–59. Collect. [Google Scholar]
- 31.Barton DHR, Bashiardes G, Fourrey JL. Studies on the oxidation of hydrazones with iodine and with phenylselenenyl bromide in the presence of strong organic bases; an improved procedure for the synthesis of vinyl iodides and phenyl-vinyl selenides. Tetrahedron. 1988;44:147–162. [Google Scholar]
- 32.Barton DHR, Chen M, Jaszberenyi JCs, Taylor DK. Organic Syntheses. IX. Wiley; New York: 1998. Preparation and reactions of 2-tert-butyl-1,1,3,3-tetramethylguanidine: 2,2,6-trimethylcyclohexen-1-yl iodide; pp. 147–150. Collect. [Google Scholar]
- 33.Kolocouris A, Spearpoint P, Martin SR, Hay AJ, López-Querol M, Sureda FX, Padalko E, Neyts J, De Clercq E. Comparisons of the influenza virus A M2 channel binding affinities, anti-influenza virus potencies and NMDA antagonistic activities of 2-alkyl-2-aminoadamantanes and analogues. Bioorg Med Chem Lett. 2008;18:6156–6160. doi: 10.1016/j.bmcl.2008.10.003. [DOI] [PubMed] [Google Scholar]
- 34.Cady SD, Wang J, Wu Y, DeGrado WF, Hong M. Specific binding of adamantane drugs and direction of their polar amines in the pore of the influenza M2 transmembrane domain in lipid bilayers and dodecylphosphocholine micelles determined by NMR Spectroscopy. J Am Chem Soc. 2011;133:4274–4284. doi: 10.1021/ja102581n. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Wang C, Takeuchi K, Pinto LH, Lamb RA. Ion channel activity of influenza A virus M2 protein: characterization of the amantadine block. J Virol. 1993;67:5585–5594. doi: 10.1128/jvi.67.9.5585-5594.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Stevaert A, Dallocchio R, Dessì A, Pala N, Rogolino D, Sechi M, Naesens L. Mutational analysis of the binding pockets of the diketo acid inhibitor L-742, 001 in the influenza virus PA endonuclease. J Virol. 2013;87:10524–10538. doi: 10.1128/JVI.00832-13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Ma C, Soto CS, Ohigashi Y, Taylor A, Bournas V, Glawe B, Udo MK, DeGrado WF, Lamb RA, Pinto LH. Identification of the pore-lining residues of the BM2 ion channel protein of influenza B virus. J Biol Chem. 2008;283:15921–15931. doi: 10.1074/jbc.M710302200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Vanderlinden E, Göktas F, Cesur Z, Froeyen M, Reed ML, Russell CJ, Cesur N, Naesens L. Novel inhibitors of influenza virus fusion: structure-activity relationship and interaction with the viral hemagglutinin. J Virol. 2010;84:4277–4288. doi: 10.1128/JVI.02325-09. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Naesens L, Vanderlinden E, Roth E, Jeko J, Andrei G, Snoeck R, Pannecouque C, Illyes E, Batta G, Herczegh P, Sztaricskai F. Anti-influenza virus activity and structure-activity relationship of aglycoristocetin derivatives with cyclobutenedione carrying hydrophobic chains. Antiviral Res. 2009;82:89–94. doi: 10.1016/j.antiviral.2009.01.003. [DOI] [PMC free article] [PubMed] [Google Scholar]
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