Abstract
Background
α/β-hydrolase domain containing (ABHD)12 is a recently discovered serine hydrolase that acts in vivo as a lysophospholipase for lysophosphatidylserine. Dysfunctional ABHD12 has been linked to the rare neurodegenerative disorder called PHARC (polyneuropathy, hearing loss, ataxia, retinosis pigmentosa, cataract). In vitro, ABHD12 has been implicated in the metabolism of the endocannabinoid 2-arachidonoylglycerol (2-AG). Further studies on ABHD12 function are hampered as no selective inhibitor have been identified to date. In contrast to the situation with the other endocannabinoid hydrolases, ABHD12 has remained a challenging target for inhibitor development as no crystal structures are available to facilitate drug design.
Methodology/Principal Findings
Here we report the unexpected discovery that certain triterpene-based structures inhibit human ABHD12 hydrolase activity in a reversible manner, the best compounds showing submicromolar potency. Based on structure activity relationship (SAR) data collected for 68 natural and synthetic triterpenoid structures, a pharmacophore model has been constructed. A pentacyclic triterpene backbone with carboxyl group at position 17, small hydrophobic substituent at the position 4, hydrogen bond donor or acceptor at position 3 accompanied with four axial methyl substituents was found crucial for ABHD12 inhibitor activity. Although the triterpenoids typically may have multiple protein targets, we witnessed unprecedented selectivity for ABHD12 among the metabolic serine hydrolases, as activity-based protein profiling of mouse brain membrane proteome indicated that the representative ABHD12 inhibitors did not inhibit other serine hydrolases, nor did they target cannabinoid receptors.
Conclusions/Significance
We have identified reversibly-acting triterpene-based inhibitors that show remarkable selectivity for ABHD12 over other metabolic serine hydrolases. Based on SAR data, we have constructed the first pharmacophore model of ABHD12 inhibitors. This model should pave the way for further discovery of novel lead structures for ABHD12 selective inhibitors.
Introduction
The serine hydrolase α/β-hydrolase domain containing (ABHD)12 is a membrane-bound enzyme that together with monoacylglycerol lipase (MAGL) and ABHD6 contributes to the metabolism of the endocannabinoid 2-arachidonoylglycerol (2-AG) in vitro [1]. In vivo, ABHD12 serves as a lysophospholipase showing preference towards lysophosphatidylserine (LPS) in the mammalian nervous system [2]. Even though ABHD12 is still poorly characterized, recently developed ABHD12−/− mice have shed some light to its possible physiological functions. In the study of Blankman et al. (2013), ABHD12 deficient mice developed age-dependent symptoms that resemble the human neurodegenerative disorder PHARC (polyneuropathy, hearing loss, ataxia, retinosis pigmentosa, cataract). Authors suggested that the disrupted LPS metabolism and resulting neuroinflammation may form one of the molecular basis for PHARC [3].
Tissue distribution and subcellular localization of MAGL, ABHD6 and ABHD12 are different, suggesting that these hydrolases could control different pools of 2-AG [1]. An active site of ABHD12 is predicted to face the lumen and/or extracellular space and in the latter position ABHD12 could possibly metabolize extracellular pool of 2-AG. We have recently delineated the monoacylglycerol (MAG) substrate preferences of ABHD12 in vitro and found that unlike MAGL, ABHD12 (and ABHD6) prefers the 1(3)-isomers of unsaturated MAGs over the 2-isomers [4]. More detailed pharmacological studies with ABHD12 have been limited due to the lack of selective inhibitor(s). Preliminary inhibitor profiling has shown that the universal lipase/serine hydrolase inhibitors tetrahydrolipstatin (THL, Figure S1) and methyl arachidonyl fluorophosphonate (MAFP, Figure S1) relatively potently inhibit ABHD12 [4]. ABHD12 has remained a challenging target for inhibitor development as there are no crystal structures available, number of known inhibitors is low and the existing activity data are limited.
In order to find novel lead structures for selective inhibitors of recently discovered serine hydrolases, exploring the activity of natural compounds may offer valuable information for this developing process. For instance, plant-derived pentacyclic triterpenes such as betulinic, oleanolic and ursolic acid are interesting molecules as they all are bioactive and widespread in nature and their therapeutic potential is well documented [5]–[9] see also reviews [10]–[16] and references cited therein. In addition, their multi-targeting biological activity, low toxicity, easy availability, and core structure offering good starting point for chemical modifications, make triterpenoids appealing source for the drug discovery. Along this line, recent studies have revealed that triterpenes may include potential candidates for novel inhibitors of e.g. endocannabinoid hydrolases. Indeed, pristimerin has been shown to inhibit MAGL activity in in vitro studies [17], [18]. In another study, a mixture of α/β-amyrin (ursane and oleanane-type triterpenoids, Figure S2) was shown to reduce inflammatory and neuropathic hyperalgesia in mice through activation of the cannabinoid CB1 (CB1R) and CB2 (CB2R) receptors [19]. Interestingly, despite their high affinity towards CB1R, the compounds failed to show any cannabimimetic effects in the tetrad test. In addition, α- and β-amyrin were reported to inhibit 2-AG-hydrolysis in pig brain homogenates [20]. The molecular target of this action was not identified.
Our preliminary screening efforts to identify novel serine hydrolase inhibitors among various chemical compounds revealed unexpectedly that ursolic acid was able to selectively inhibit ABHD12 with negligible effect on ABHD6 or MAGL activity. Inspired by this finding, we selected various commercial triterpenes/triterpenoids as well as recently reported betulin-based triterpenes for further evaluation. In this paper, we report the inhibitory activity of these compounds towards human ABHD12. Based on the activity data we have established preliminary structure-activity relationships (SAR) and constructed the first pharmacophore model for betulin-based triterpenes. This model should prove useful in the discovery of novel lead structures for ABHD12 selective inhibitors. Although the triterpenoids typically interact with multiple protein targets, we witnessed unprecedented selectivity towards ABHD12 among the metabolic serine hydrolases, as activity-based protein profiling (ABPP) of mouse brain membrane proteome indicated that the representative ABHD12 inhibitors did not inhibit other serine hydrolases, nor did they target cannabinoid receptors.
Results and Discussion
Structure-activity relationship (SAR) studies
Pentacyclic triterpenes can be classified into three different groups: lupanes, oleananes and ursanes. Derivatives of triterpenes are called triterpenoids. In this study, commercially available triterpenes 1–11 and triterpenoids 12–15 were purchased from different chemical vendors and tested for their ability to inhibit hydrolase activity in lysates of HEK293 cells transiently overexpressing human ABHD12 (hABHD12) [4]. The inhibition data are presented in Table 1 (detailed chemical structures of the tested compounds are presented in Figure S2). In the lupane series (1–3), an importance of a carboxyl group at position 17 was shown as betulinic acid (1) had the highest inhibitory activity (IC50 = 2.5 µM). However, lipophilicity differences should also be taken into consideration as the compound with the lowest logD (Table 1) also had the highest inhibitory activity. In the ursane series (4–6), similar effect of the carboxyl group at position 17 was observed as ursolic acid (4) showed higher inhibition activity compared to α-amyrin (6) that has a methyl group at this position. Asiatic acid (5), which has a primary hydroxyl group at the position 4, was completely devoid of activity, demonstrating the importance of this position for hABHD12 inhibition. Notably, asiatic acid had the highest water solubility of the entire series which, in this case, did not lead to higher activity. Asiatic acid also has an extra hydroxyl group at position 2. However, it can be concluded that this hydroxyl group was actually favored as maslinic acid (8) belonging to the oleanane series, had the same substitution and this feature greatly improved the inhibitory activity. In fact, among the 15 commercial compounds tested, maslinic acid was the best hABHD12 inhibitor having an IC50 value of 1.3 µM. The oleanane series (7–11) further confirmed our findings that dimethyl at position 4 in combination with a carboxyl group at position 17 were important features for hABHD12 inhibition. Finally, we tested four triterpenoids, 2-cyano-3,12-dioxo-oleana-1,9(11)-dien-28-oic acid (CDDO) (12), CDDO methyl ester (13), celastrol (14), and the established MAGL inhibitor pristimerin (15). All four derivatives failed to show any inhibition of hABHD12 and the findings with pristimerin are in agreement with those in the study by King et al. [17] where pristimerin was tested against different endocannabinoid targets. Poor inhibitory activity of triterpenoids 12–15 allowed us to conclude that triterpene backbone was crucial for the hABHD12 inhibitor activity.
Table 1. Inhibitor potency in hABHD12-HEK293 lysates for commercially available triterpenes (1–11) and triterpenoids (12–15) as well as their calculated lipophilicity values (logD).
Compound | General name | Remaining activity at 10 µM % ± s.e.m. | -logIC50±s.e.m. [IC50] (max inhibition) | logD1 (pH 7.4) |
1 | Betulinic acid | 5.60±0.182 [2.5 µM] | 4.04 | |
2 | Betulin | ∼75 | 6.17 | |
3 | Lupeol | NI | 7.45 | |
4 | Ursolic acid | ∼30 | 5.74±0.142 [1.8 µM] | 3.98 |
5 | Asiatic acid | NI | 1.62 | |
6 | α-Amyrin | NI | 7.39 | |
7 | Oleanolic acid | ∼20 | 5.80±0.072 [1.6 µM] | 3.99 |
8 | Maslinic acid | 5.90±0.04 [1.3 µM] (89%) | 2.92 | |
9 | Hederagenin | 78±3.0 | 2.71 | |
10 | β-Amyrin | NI | 7.40 | |
11 | α-Boswellic acid | NI | 3.84 | |
12 | CDDO | NI | 3.68 | |
13 | CDDO methyl ester | NI | 6.55 | |
14 | Celastrol | NI | 2.75 | |
15 | Pristimerin | NI | 5.47 |
logD values have been calculated using ChemAxon Marvin 6.0 software.
Valueas are -logIC50±s.d., n = 2.
NI no inhibition.
Data are mean ± SEM from three independent experiments.
As betulinic acid (1), ursolic acid (4) and oleanolic acid (7) had only minor differences in their inhibitory activities, neither the size of the ring E (Figure S1) nor its substituents have a role in hABHD12 inhibition. In order to establish additional structural features that are critical for hABHD12 inhibition, we chose a series of previously reported derivatives of betulinic acid (16–43 Table 1 and Figures 1–4, for compounds 44–68 see Table S3) for further evaluation. Importance of the carboxyl group at position 17 was further verified by testing an aldehyde 16 which only weakly inhibited hABHD12 (∼30%) at 10 µM concentration (Figure 1). When comparing two similar aldehydes (16 and 17), the inhibition was enhanced to moderate level when hydroxyl substituent at position 3 was replaced to carbonyl, i.e. a plain hydrogen bond accepting group. An amide bond (20–22, Figure 1) as well as an insertion of an ester (26–28, Figure 2) or ether (29, Figure 2) similarly decreased inhibitor activity. When carboxyl group was replaced with an oximino group (24, Figure 2), modest inhibitory activity was observed (IC50 6.5 µM). Inhibitory activity of the oxime 24 was retained by replacing hydroxyl group at position 3 with another oximino group (25, Figure 2). When carboxyl group at position 17 was retained and an oximino group was added at position 3 (19, Figure 1), decreased inhibitory activity was observed. However, it was interesting that compound 19 was able to fully inhibit the enzyme whereas maximum inhibition of the compound 24 was only 61%.
The effect of the modifications on the ring A on hABHD12 inhibitor activity are presented in the Figures 3–4 and Table S3. As shown in the case of maslinic acid, an additional hydroxyl group at the position 2 resulted in good inhibition. We synthesized the corresponding betulinic acid derivative 32 (Figure 3) and observed that the activity of this compound was similar to that of the parent betulinic acid (1). Additional heterocyclic ring system attached to the ring A generally gave good inhibition. For example, when hydroxyl groups at positions 2 and 3 were protected as an acetonide (31), modest inhibitory activity (IC50 7.5 µM) was observed. Replacement of a ring A with a lactam ring (36) resulted in modest inhibitory activity (IC50 9.1 µM), however, the lactam ring also decreased selectivity, as compound 35 also inhibited MAGL (∼50% inhibition at 10 µM concentration, Table S1). Introduction of a pyridine or a pyrazine ring (40–43, Figure 4) or an indole ring (33–34, Figure 3) revealed an important structural feature. The position of a nitrogen atom in the pyridine ring turned out to be important for the inhibitory activity as the compound 41 showed improved activity over the compound 40. Activity was further improved by replacing the pyridine ring with an indole ring (33–34, Figure 3) or a pyrazole (37, Figure 3). In fact, compound 33 was the most potent compound of the entire series having an IC50 value of 0.9 µM (maximum inhibition 65%). As evidenced by the total loss of the inhibitory activity in the case of the indole-fused allobetulin derivative 35 (Figure 3), the carboxyl group at position 17 was still needed for inhibitory activity. However, one should also keep in mind that the solubility of allobetulin derivative was very low. Finally, poor inhibitory activity of the isoxazole 38 allowed us to conclude that a functional group with a hydrogen bond donor or acceptor at carbon 3 was crucial for ABHD12 inhibitory activity.
In summary, the above-described SAR studies allowed us to identify four key determinants for hABHD12 inhibition potency and efficacy. These key features played an important role in building a pharmacophore model of ABHD12 that is described later in this chapter. (i) Shape complementarity of the triterpene skeleton accompanied with four axial methyl substituents likely play an important role in inhibitor binding. Additional double bonds within the skeleton (CDDO and celastrol) affect the overall planar shape of triterpene scaffold, leading to total lack of inhibitory activity. (ii) Carboxyl group at position 17 in triterpene core structure is of crucial importance, as basically any modification at this position reduced, or fully eliminated inhibitory activity. It is known from previous studies that the carboxyl group at this position is crucial also in many other biological targets [21]–[23]. (iii) Small, hydrophobic substituents at the position 4 are required, as asiatic acid (5) and hederagenin (9) did not inhibit hABHD12. (iv) As summarized in Figure S3, hydrogen bond donor or acceptor attached to position 3 was a key feature required for high inhibitory potency. This was further illustrated by pyridine and pyrazine derivatives 40–42. Compounds 41 and 42 have a nitrogen at this position and show moderate inhibitory activity (IC50 values 6.7 and 3.6 µM, respectively). In contrast, no atom capable of hydrogen bonding is present in the compound 40, causing dramatic decrease of inhibitory activity (34% inhibition at 10 µM). A good pair of compounds for comparison was 37 and 38. The pyrazole derivative 37 was one of the most potent compounds in the series. On the other hand, when an aromatic nitrogen was replaced by an oxygen (isoxazole 38), a complete loss of the inhibitory activity was observed. This was due to the fact that oxygen within an aromatic ring cannot form hydrogen bond. The most promising synthetic compounds in the series were compounds 33 and 34 which both have an indole ring attached to ring A, and thus, a nitrogen atom at this crucial hydrogen bonding position. The compound 34 has an electron donating methoxy group at the indole ring which may cause tighter interaction between indole nitrogen and amino acid residues of the enzyme. In addition, good inhibitory activity of this methoxy derivative also implies that there is additional space for bulkier substituents in this direction. Strength of a hydrogen bond may also explain why these compounds were equally potent in inhibiting hABHD12 activity but their maximal inhibition was significantly different (65% and 100%, respectively). Similar trend in efficacy was observed with the compounds 41 and 42, i.e. additional nitrogen in pyrazine decreased efficacy (maximal inhibition 80 and 56%, respectively). Collectively, the above data demonstrate the importance of a hydrogen bond donor at position 3. However, as betulinic acid (1) that can act both as a hydrogen bond acceptor and a donor, and compound 18 that is a hydrogen bond acceptor, both showed good inhibitory activity, we were able to conclude that both hydrogen bond donor and acceptor are tolerated at this position.
The key finding that both hydrogen bond donor and acceptor at position 3 are able to form good interactions with the enzyme led us to hypothesize that these interactions might involve a serine residue, possibly the catalytic serine (S246) of ABHD12, previously identified by site-directed mutagenesis [4]. However, due to the reversible nature of triterpenoid inhibition (see below), this hypothesis could not be experimentally tested.
Triterpenoids inhibit hABHD12 in a reversible manner
There are no suitable functional groups in the triterpenoid scaffold that could irreversibly react with catalytic residues of the serine hydrolases. This has been previously shown with pristimerin that inhibits MAGL in a reversible manner [17]. To test whether the triterpenoids also reversibly inhibit hABHD12, we assessed time-dependency of inhibitor potency following rapid, 40-fold dilution of the enzyme-inhibitor complex. We determined the IC50 values for selected triterpenoids from kinetically recorded data at time points 10, 20, 30, 60 and 90 minutes. A statistically significant, time-dependent drop in inhibitor potency was evident for the tested triterpenoids, indicating rapid dissociation of the inhibitor from the enzyme's active site (Figure S4). In contrast, the IC50 values for the reference compound THL remained constant regardless of the incubation time, indicating that within the time-frame studied, the β-lactone irreversibly inhibited hABHD12.
A ligand-based pharmacophore model for ABHD12
Low structural homology to experimental template structures prevented a creation of a comparative model of ABHD12 that could have been used in docking studies. Before looking at the SAR in more detail, we wished to clarify whether the chemical structures of the in vivo substrate LPS, the irreversible inhibitor THL, and the triterpene inhibitor betulinic acid could be aligned. Interestingly, molecular superimposition disclosed that there were striking similarities, not only in the topology and dimensions of the three compounds, but also in the distance and orientation of the functional groups (Figure S5). Encouraged by these findings, we proceeded to the collected SAR data that included a total of 68 compounds of which 18 are classified as active and 50 as inactive. Based on these compounds, we constructed a model that consists of 14 pharmacophoric features (Figure 5). When a partial match of 11/14 was used, all 18 active triterpenoids satisfied the query and only 4 false positives were found (false positive compounds: betulin, asiatic acid, hederagenin and compound 16, false positive rate = 0.08). It can be concluded that some inactive compounds were structurally so close to the active compounds that they cannot be easily ruled out by the means of common pharmacophoric criteria.
Triterpenoids exhibit unprecedented selectivity towards ABHD12 among the serine hydrolases
Triterpenoids possess a “universal” core structure that can be recognized by many proteins. Therefore, the triterpenoids reported in this paper are likely to have additional targets besides ABHD12. Despite this, we were surprised to learn that the representative inhibitors in the triterpenoid series did not hit other targets of the endocannabinoid system including ABHD6, MAGL, fatty acid amide hydrolase (FAAH) or the cannabinoid receptors (Tables S1 and S2). We used activity-based protein profiling (ABPP) with the catalytic serine-targeting probe TAMRA-FP to unveil triterpenoid targets among the metabolic serine hydrolases in lysates of hABHD12-HEK293 cells (Figure 6A–B). These experiments revealed that the active triterpenoid 23 dose-dependently inhibited probe labeling of hABHD12 whereas compound 22 which was inactive in glycerol-based hydrolase assays, lacked activity also in the ABPP assay. We extended the ABPP studies to cover mouse brain membrane proteome and found that compound 23 and maslinic acid (8) (but not the inactive compound 22) selectively inhibited probe labeling of ABHD12 in the brain proteome (Figure 6C). It is noteworthy that with the exception of maslinic acid interfering with probe labeling of an uncharacterized ∼90 kDa protein, no additional targets were evident for the triterpenoids among the brain membrane serine hydrolases (Figure 6C). Thus, although the in vitro inhibitor and substrate profiles of ABHD12 were previously shown to partly overlap with those of ABHD6 and MAGL [4], ABHD12 appears to be rather unique among these hydrolases, and more broadly so also among the metabolic serine hydrolases, as it was the sole serine hydrolase targeted by the triterpenoids in native brain membrane proteome.
In conclusion, we report the discovery of the first phytocompounds and their synthetic analogues that inhibit human and mouse ABHD12. The studied compounds belong to the class of triterpenoids that are known to possess wide-ranging therapeutic effects. The best compounds fully inhibited hABHD12 with the IC50 values in the submicromolar range. Further mechanistic studies using representative compounds, including maslinic acid, showed that ABHD12 inhibition was reversible. The compounds did not inhibit the endocannabinoid hydrolases such as ABHD6, MAGL and FAAH, nor did they show appreciable activity towards the cannabinoid receptors. Activity-based protein profiling of mouse brain membrane proteome with a serine hydrolase-targeting probe revealed that the triterpenoids selectively inhibited ABHD12 with no additional targets evident among the metabolic serine hydrolases. Thus contrary to preconceived thinking, the triterpenoids showed unprecedented selectivity for ABHD12, not only over other serine hydrolases but also over cannabinoid receptors. Finally, using our SAR analysis with the presently described betulin-based compound series, we have disclosed important structural features required for ABHD12 inhibition. We have used these data in the development of the first pharmacophore model for ABHD12. This model should be useful in further studies aiming at the discovery of novel lead structures for ABHD12 inhibitors.
Methods
Chemistry
Compounds 1, 3–7, 9–11 and 14–15 were purchased from Sigma-Aldrich and compounds 2, 8 and 12–13 from Cayman Chemical Company. Commercially available compounds were used without further purification or structural verification. Synthesis procedures and structural verification of the compounds 16–43 (with the exception of compound 32 and 40) have been previously reported [24]–[27]. Structures of inactive compound 44–68 have been presented in Table S3. Synthesis procedures and structural verification have been previously reported (with the exception of the compound 68) [24]–[27].
Synthesis procedures (compounds 32, 40, 68)
2β,3β-Dihydroxylup-20(29)-en-28-oic acid (32)
A mixture of betulonic acid (68 mg, 0.15 mmol) and potassium tert-butoxide (604 mg, 5.40 mmol) in tert-butanol (7.0 mL) was stirred with constant air flow at 40°C for 2 h. Then 1 M hydrochloric acid was added and the resulting mixture was extracted with EtOAc several times. The combined organic phases were washed with water and brine, dried over anhydrous Na2SO4 and evaporated to give a white crystalline solid 2-hydroxy-3-oxolupa-1(2),20(29)-dien-28-oic acid (69 mg, 98%). 1H NMR (300 MHz, CDCl3) δ 6.44 (s, 1H), 4.75 (s, 1H), 4.63 (s, 1H), 3.11–2.93 (m, 1H), 2.38–2.15 (m, 2H), 1.70 (s, 3H), 1.52 (m, 15H), 1.20 (s, 3H), 1.12 (s, 3H), 1.10 (s, 3H), 1.01 (s, 3H), 0.98 (s, 3H). A solution of 2-hydroxy-3-oxolupa-1(2),20(29)-dien-28-oic acid (69 mg, 0.15 mmol) in tetrahydrofuran (3 mL) and ethanol (1 mL) was kept on ice bath and NaBH4 (18 mg, 0.48 mmol) was added to the solution. The resulting mixture was stirred at room temperature for 2 h. Then 1 M hydrochloric acid was added to the reaction mixture, and it was extracted with EtOAc, washed with water and brine, dried over anhydrous Na2SO4, and evaporated. The crude product was purified with SiO2 column chromatography (10–100% EtOAc/n-hexane) to yield 2β,3β-dihydroxylup-20(29)-en-28-oic acid as a white crystalline solid (25 mg, 35%). 1H NMR (300 MHz, (CD3)2CO) δ 4.73 (m, 1H), 4.60 (m, 1H), 4.01 (m, 1H), 3.49 (br s, 1H), 3.13 (d, J = 4.0 Hz, 1H), 3.06 (m, 1H), 2.32 (m, 2H), 2.13 (dd, J = 14.2, 2.9 Hz, 1H), 1.94 (m, 2H), 1.70 (s, 3H), 1.57–1.36 (m, 9H), 1.19 (s, 3H), 1.02 (s, 3H), 0.98 (s, 6H), 0.97 (s, 3H); 13C NMR (75 MHz, (CD3)2CO) δ 177.7, 151.8, 110.2, 78.8, 72.0, 57.0, 56.5, 52.0, 50.2, 48.2, 45.6, 43.6, 41.9, 39.3, 39.2, 38.0, 37.8, 35.4, 33.1, 31.6, 30.6, 26.7, 22.1, 19.7, 19.1, 17.9, 17.8, 16.8, 15.3. NMR spectral data is consistent with those previously reported [28].
Lupa-2,20(29)-dieno[2,3-b]pyridin-28-oic acid. (i) Benzyl betulonate (40)
To a mixture of betulonic acid (0.500 g, 1.10 mmol) and K2CO3 (304 mg, 2.20 mmol) in DMF (10 mL) at 55°C, benzyl bromide (244 mg, 1.43 mmol) was added dropwise. After stirring the reaction mixture at 55°C overnight, water was added, and the resulting solution was extracted with EtOAc. The organic phase was washed with water for several times and subsequently with brine, dried over anhydrous Na2SO4 and evaporated. The crude product was purified with SiO2 column chromatography (20–50% EtOAc/n-hexane) to yield benzyl betulonate as a white crystalline solid (388 mg, 65%). 1H NMR (300 MHz, CDCl3) δ 7.35 (m, 5H), 5.12 (q, J = 12.3 Hz, 2H), 4.72 (s, 1H), 4.60 (s, 1H), 3.16–2.93 (m, 1H), 2.35 (m, 4H), 1.97–1.79 (m, 3H), 1.66 (s, 3H), 1.49–1.19 (m, 15H), 1.06 (s, 3H), 1.01 (s, 3H), 0.95 (s, 3H), 0.90 (s, 3H), 0.79 (s, 3H). (ii) Benzyl 2-hydroxy-3-oxolupa-1(2),20(29)-dien-28-oate. A mixture of benzyl betulonate (822 mg, 1.55 mmol) and potassium tert-butoxide (2.38 g, 43.8 mmol) in tert-butanol (50 mL) was stirred with constant air flow at 40°C for 2 h. Then 1 M hydrochloric acid was added and the resulting mixture was extracted with EtOAc several times. The combined organic phases were washed with water and brine, dried over anhydrous Na2SO4 and evaporated to give a white crystalline solid benzyl 2-hydroxy-3-oxolupa-1(2),20(29)-dien-28-oate (817 mg, quant.). 1H NMR (300 MHz, CDCl3) δ 7.43–7.28 (m, 4H), 5.13 (q, J = 12.3 Hz, 2H), 4.72 (s, 1H), 4.61 (s, 1H), 3.01 (s, 1H), 2.25 (m, 3H), 1.65 (s, 3H), 1.62–1.31 (m, 14H), 1.18 (s, 3H), 1.09 (s, 6H), 1.18 (s, 3H), 1.09 (s, 3H), 0.96 (s, 3H), 0.79 (s, 3H). (iii) Benzyl 2 α ,3 β -dihydroxylup-20(29)-en-28-oate. A solution of benzyl 2-hydroxy-3-oxolupa-1(2),20(29)-dien-28-oate (817 mg, 1.46 mmol) in tetrahydrofuran (20 mL) and ethanol (4 mL) was kept on ice bath and NaBH4 (159 mg, 2.88 mmol) was added to the solution. The resulting mixture was stirred at room temperature for 1.5 h. Then 1 M hydrochloric acid was added to the reaction mixture, and it was extracted with EtOAc, washed three times with water, a saturated aqueous solution of NaHCO3, water and brine, dried over anhydrous Na2SO4, and evaporated. The crude product was purified with SiO2 column chromatography (10–50% EtOAc/n-hexane) to yield benzyl 2α,3β-dihydroxylup-20(29)-en-28-oate as a white crystalline solid (605 mg, 74%). 1H NMR (300 MHz, CDCl3) δ 7.50–7.26 (m, 5H), 5.12 (q, J = 12.3 Hz, 2H), 4.72 (s, 1H), 4.59 (s, 1H), 4.08 (d, J = 3.4 Hz, 1H), 3.17 (d, J = 4.0 Hz, 1H), 3.02 (d, J = 4.6 Hz, 1H), 2.43–2.05 (m, 2H), 1.88 (m, 4H), 1.67 (s, 3H), 1.58–1.18 (m, 14H), 1.17–1.02 (m, 7H), 0.97 (s, 6H), 0.93 (s, 3H), 0.76 (s, 3H). (iv) A mixture of benzyl 2-oxolup-20(29)-en-28-oate and benzyl 3-oxolup-20(29)-en-28-oate. A solution of benzyl 2α,3β-dihydroxylup-20(29)-en-28-oate (605 mg, 1.07 mmol) and p-toluenesulfonyl chloride (287 mg, 1.50 mmol) in anhydrous pyridine (10 mL) was stirred at 30°C for 6 h and after that stirring was continued at 60°C for 18 h. The reaction mixture was cooled to room temperature and 1 M hydrochloric acid was added. The resulting mixture was extracted with EtOAc, washed three times with water, a saturated aqueous solution of NaHCO3 and brine, dried over anhydrous Na2SO4 and evaporated. The crude product was purified with SiO2 column chromatography (5–20% EtOAc/n-hexane) to yield a mixture of two compounds, benzyl 2-oxolup-20(29)-en-28-oate and benzyl 3-oxolup-20(29)-en-28-oate as a white crystalline solid (339 mg, 58%). 1H NMR (300 MHz, CDCl3) δ 7.33 (m, 5H), 5.29–4.95 (m, 2H), 4.72 (s, 1H), 4.59 (s, 1H), 3.17–2.87 (m, 1H), 2.57–2.05 (m, 4H), 2.06–1.79 (m, 3H), 1.68 (s, 3H), 1.54–1.13 (m, 17H), 1.05 (s, 2H), 1.02 (s, 2H), 1.00 (s, 2H), 0.97 (s, 2H), 0.94 (s, 2H), 0.89 (s, 2H), 0.84 (s, 3H), 0.80 (s, 2H), 0.78 (s, 2H), 0.74 (s, 2H). (v) A mixture of betulonic acid and 2-oxolup-20(29)-en-28-oic acid. To a solution of benzyl 2-oxolup-20(29)-en-28-oate and benzyl 3-oxolup-20(29)-en-28-oate (330 mg, 0.60 mmol) in tetrahydrofuran (15 mL) was added 10% Pd on carbon (30 mg) under argon. Argon atmosphere was replaced with H2, and the resulting mixture was stirred at room temperature for 4.5 h. The reaction mixture was filtered through a thin layer of Celite, and the resulting filtrate was evaporated. The crude product was purified with SiO2 column chromatography (10–30% EtOAc/n-hexane) to yield a mixture of betulonic acid and 2-oxolup-20(29)-en-28-oic acid as a white crystalline solid (220 mg, 80%). 1H NMR (300 MHz, CDCl3) δ 4.74 (s, 1H), 4.61 (s, 1H), 2.99 (m, 1H), 2.60–2.11 (m, 5H), 2.02–1.78 (m, 3H), 1.72 (s, 4H), 1.57–1.14 (m, 17H), 1.07 (s, 1H), 1.04 (s, 2H), 1.01 (s, 2H), 0.99 (s, 2H), 0.97 (s, 2H), 0.93 (s, 1H), 0.92 (s, 2H), 0.85 (s, 2H), 0.83 (s, 2H). (vi) Lupa-2,20(29)-dieno[2,3- b ]pyridin-28-oic acid. A mixture of betulonic acid and 2-betulonic acid (220 mg, 0.48 mmol) as well as propargylamine (53 mg, 0.97 mmol) and CuCl2 (27 mg, 0.16 mmol) in ethanol (8 mL) was refluxed for 17 h. The resulting solution was filtered and evaporated, and the crude product was purified with SiO2 column chromatography (10–50% EtOAc/n-hexane) to give lupa-2,20(29)-dieno[2,3-b]pyridin-28-oic acid (35) as a crystalline product (37 mg, 21%).1H NMR (300 MHz, CDCl3) δ 8.37 (1H, dd, J = 4.8, 1.6 Hz, H-31), 7.68–7.61 (1H,m, H-33), 7.13 (1H, dd, J = 8.0, 4.8 Hz, H-32), 4.75 (1H, s, H-29), 4.63 (1H, s, H-29), 3.07 (2H, m, H-1), 2.48 (2H, m) 2.31 (2H, m, H-11), 1.98 (2H, m), 1.71 (3H s, H-30), 1.54 (m, 13H), 1.27 (m, 2H), 1.23 (3H, s, H-23/24), 1.18 (3H, s, H-24/23), 1.02 (3H, s, H-27), 1.01 (3H, s, H-26), 0.80 (3H, s, H-25); 13C NMR (75 MHz, CDCl3) δ 180.9 (C-28), 155.0 (C-2), 150.6 (C-20), 146.1 (C-31), 141.0 (C-4), 135.7 (C-33), 121.9 (C-32), 110.0 (C-29), 56.6, 53.0 (C-5), 49.4, 49.0 (C-9), 48.8 (C-1), 47.1 (C-19), 42.7, 40.7 (C-13), 38.7, 37.3, 37.1, 36.8 (C-10), 33.6, 33.2 (C-23/24), 32.4 (C-11), 30.9, 29.9, 25.7 (C-24/23), 21.5, 20.2, 19.7 (C-30), 16.2 (C-25), 15.9 (C-26), 14.9 (C-27); FTIR (ν, cm−1): 872, 1132, 1159, 1178, 1449, 1708, 2869, 2943; HRMS: m/z calcd for C33H48NO2: 490.3685, found 490.3688 [M+H]+.
1-(1H-1,2,4-Triazol-1-yl)betulonone (68)
Solution of betulonic acid (0.10 g, 0.22 mmol) and 1,1′-carbonyl-di-(1,2,4-triazole) (216 mg, 1.30 mmol) in tertrahydrofuran was refluxed for 20 h. Solvent was evaporated and the crude product was purified with SiO2 column chromatography (10-100% EtOAc/n-hexane) to yield 1-(1H-1,2,4-triazol-1-yl)betulonone as white solid (55 mg, 49%). 1H NMR (300 MHz, CDCl3) δ 8.91 (s, 1H), 7.98 (s, 1H), 4.76 (s, 1H), 4.64 (s, 1H), 3.08–2.85 (m, 2H), 2.73–2.30 (m, 4H), 1.90 (m, 1H), 1.71 (s, 3H), 1.38 (m, 10H), 1.06 (s, 3H), 1.01 (s, 6H), 0.96 (s, 3H), 0.94 (s, 3H); 13C NMR (75 MHz, CDCl3) δ 218.0, 173.6, 152.4, 150.1, 145.3, 110.2, 58.6, 55.2, 51.2, 50.3, 47.5, 45.8, 42.6, 40.9, 39.8, 37.4, 37.1, 36.4, 34.3, 33.8, 31.7, 30.7, 30.0, 26.8, 25.7, 21.7, 21.2, 19.8, 19.6, 16.2, 16.0, 14.8; FTIR (ν, cm−1): 670, 897, 1178, 1271, 1356, 1706, 1736, 2872, 2940; HRMS: m/z calcd for C32H47N3NaO2: 528.3566, found 528.3563 [M+Na+] [29].
Determination of endocannabinoid hydrolase activity
Glycerol liberated from 1-AG hydrolysis was determined with a sensitive fluorescent assay using lysates of HEK293 cells with transient overexpression of hABHD12, hABHD6 or hMAGL, essentially as previously described [4]. Briefly, following 30 min incubation of DMSO/inhibitor (1 µl) together with hABHD12-HEK293, hABHD6-HEK293 or hMAGL-HEK293 lysates (99 µl, 0.3 µg protein/well) in TEMN-BSA buffer [50 mM Tris-HCl, pH 7.4, 1 mM EDTA, 5 mM MgCl2, 100 mM NaCl, 0.5% (w/v) fatty acid-free BSA], 1-AG [12.5 µM final concentration, containing additionally 1% EtOH (v/v)] in glycerol assay mix prepared in TEMN-BSA buffer was added (100 µl) and the incubation continued for 90 min at RT. Fluorescence (λex 530; λem 590 nm) was monitored using a Tecan Infinite M200 plate reader (Tecan Group Ltd., Männedorf, Switzerland). Inhibitory activities of selected compounds towards FAAH were determined using membranes of hFAAH overexpressing COS-7 cells, essentially as previously described [30]. The final incubation volume (100 µL) contained 1 µg of protein and the substrate concentration was 20 µM (10 nM of 3H-anandamide having specific activity of 60 Ci/mmol and concentration of 1 mCi/mL).
Reversibility testing
Reversibility testing was carried out as previously described [31]. Briefly, DMSO/inhibitor (0.5 µl) was incubated together with hABHD12-HEK293 lysate (4.5 µl, 0.3 µg protein/well) in TEMN-BSA buffer for 30 min. After this, a 40-fold dilution of enzyme-inhibitor complex was brought about by addition of the substrate [1-AG, 12.5 µM final concentration, containing additionally 1% EtOH (v/v)] in 195 µl of glycerol assay mix and fluorescence was kinetically monitored at 10 min intervals for 90 min at RT. Five to six inhibitor concentrations were included to cover the entire dose-response range and the IC50 values were determined at time-points 10, 20, 30, 60 and 90 min.
Determination of ABHD12 activity using a LC-MS assay
Betulinic acid, oleanolic acid, ursolic acid as well as the compounds 18 and 25 at concentrations >10−5 M were found to interfere with the routine fluorescent assay, and therefore, the dose-response curves for these compounds were determined using LC-MS. The fluorescent glycerol assay was mimicked otherwise but instead of assaying glycerol, utilization of 1-AG and concomitant formation of AA was monitored by LC-MS analysis. Briefly, after 30 minutes preincubation of DMSO/inhibitor (1 µl) with hABHD12-HEK293 cell lysate (99 µl, 0.3 µg protein/well) in TEMN-BSA buffer, pH 7.4, 1-AG [12.5 µM final concentration, containing additionally 1% EtOH (v/v)] in TEMN-BSA buffer (100 µl) was added and the incubation continued for 90 min at RT. Enzymatic reaction was stopped by adding 400 µL of cold 11 mM H3PO4 in acetonitrile. 150 µL aliquots were filtered using Captiva 96-well filter plate (0.2 µm, Agilent Technologies, USA) into the Captiva 96-well collection plate (Agilent Technologies, USA) containing 50 µL of 0.1% formic acid in H2O. The collection plate was centrifuged at 4°C for 10 minutes and the samples were analyzed by LC-MS. HPLC system consisted of an Agilent 1200 Series Rapid Resolution LC System (Agilent Technologies, Waldbronn, Germany) with a solvent micro vacuum degasser, a binary pump, a thermostatted column compartment, and an autosampler. The mass analysis was made with an Agilent 6410 Triple Quadrupole MS equipped with an electrospray ionization (ESI) source (Agilent Technologies, Palo Alto, CA, USA). Five microliters of the sample solution were injected onto a reversed-phase HPLC column (Zorbax Eclipse XDB-C18 Rapid Resolution HT 2.1 mm×50 mm, 1.8 µm) (Agilent Technologies, Palo Alto, CA, USA) using an isocratic mobile phase consisting of 0.1% formic acid in a solution of H2O and methanol (20∶80 v/v) delivered at 0.5 mL/min. Column temperature was maintained at 50°C and the autosampler tray temperature was set at 4°C. The following ionization conditions were used for 1-AG: positive ESI mode, drying gas (nitrogen) temperature 300°C, drying gas flow rate 8 L/min, nebulizer pressure 40 psi, and capillary voltage 4000 V. The following ionization conditions were used for AA: negative ESI mode, drying gas (nitrogen) temperature 300°C, drying gas flow rate 8 L/min, nebulizer pressure 40 psi, and capillary voltage 4000 V. Analyte detection was performed using multiple reaction monitoring (MRM) with the following transitions: m/z 379 → 287 for 1-AG and m/z 303 → 303 for AA. Fragmentor voltage and collision energy for 1-AG and AA were 130 V/8 V and 175 V/2 V, respectively. Retention times for 1-AG and AA were 2.4 and 3.4 min, respectively. In addition, the 2-AG positional isomer is chromatographically separated from 1-AG with retention time 2.1 min, and the peak areas of 1-AG and 2-AG were subsequently combined for all quantitative analyses reported and are thus collectively termed “1-AG”. The calibration range of 0.1–2,000 ng/mL and 0.1–1,000 ng/mL was prepared for monitored 1-AG and AA, respectively. The lower limit of quantification (LLOQ) for both analytes, 1-AG and AA, was 1.0 ng/mL.
Cannabinoid receptor activity
The CB1 and CB2 receptor activity of the selected compounds (10 µM) were measured using the GTPγS binding assay according to the previously described methods [32], [33].
Activity-based protein profiling (ABPP) of serine hydrolases
Competitive ABPP using HEK293 cell lysates and mouse brain membranes was conducted to visualize effects of selected triterpenoids on the binding of the active site serine-targeting fluorescent fluorophosphonate probe TAMRA-FP following outlines of previous protocols [4], [31]. Briefly, lysates (25 µg) of HEK293 cells with or without (Mock) hABHD12 overexpression or mouse wholebrain membranes (100 µg) were treated for 1 h with DMSO or the inhibitor, after which TAMRA-FP labelling was conducted for 5 min (lysates) or 1 hour (membranes) at RT (final probe concentration 2 µM). The reaction was quenched by addition of gel loading buffer (followed by boiling for 5 min in the case of lysates), after which 10 µg protein (10 µl) was loaded per lane and the proteins were resolved in 10% SDS-PAGE together with standards. TAMRA-FP labeling was visualized (λex 552; λem 575 nm) by a fluorescent reader (FLA-3000 laser fluorescence scanner, Fujifilm, Tokyo, Japan). The intensity of bands was quantified using ImageJ, a freely available image analysis software (http://rsbweb.nih.gov/ij/).
Molecular modelling
Structures of small molecules were prepared using the LigPrep module Schrödinger's Maestro software package (Schrödinger Release 2013-2: Maestro version 9.5, LigPrep version 2.7, MacroModel, version 10.1, Schrödinger, LLC, New York, NY). Deprotonated forms of the carboxylic acids were used because that would be the predominant form of such structures at the physiological pH. The conformational database was constructed using the conformational search with default torsional sampling settings (MCMM) embedded to Macromodel module of Maestro. The full dataset of 42 triterpenoids studied here resulted in a database of 1703 conformations. The pharmacophore model was constructed using Molecular Operating Environment (MOE) software, version 2013.08 (Chemical Computing Group Inc., Canada). Active structures were overlaid using flexible alignment and the pharmacophoric elements were defined using compounds 23 and 33 as main templates. Nine hydrophobic features were used to describe the planar shape of the lupane skeleton. Three hydrogen bond acceptor features were defined using the carboxyl group at position 17, which was found to provide a good match for all active structures including also groups such as oxime and aldehyde substructures. In the case of substituents in the position 3 of the lupane skeleton both hydrogen bond donor and accepting groups can be found. We used compound 33 for placement of the hydrogen bond donating site and compound 23 for adding the hydrogen bond acceptor site. An additional acceptor site was needed for covering compounds having hydroxyl group in the position 3. Finally, a ligand shape constraint was defined using the compound 34 as template in order to rule out bigger inactive structures such as esters in the position 17. In the final model, two partial hit constraints (at least one) were added for the groups of features describing hydrogen bond interactions at the positions 3 and 17.
Data analysis
The inhibitor dose-response curves and IC50 values derived thereof were calculated from nonlinear regressions using GraphPad Prism 5.0 for Windows (GraphPad Software, San Diego California USA, www.graphpad.com) and the results are presented as mean ± S.E.M. of at least three independent experiments performed in duplicate. Statistical comparisons between hABHD12 band intensities in the ABPP study (Figure 6B) and between the IC50 values in the reversibility study (Figure S4) were tested using one-way ANOVA, followed by Tukey's multiple comparison test with p<0.05 considered as statistically significant (*P<0.05, **P<0.01, and ***P<0.001).
Ethics statement
For ABPP experiments (Figure 6C) and cannabinoid receptor activity assays (Table S2), membranes prepared from brain tissue of 4-week-old male rodents were used. The animals were obtained from the National Laboratory Animal Centre, University of Eastern Finland. Approval for the harvesting of animal tissue was obtained from the local welfare officer of the University of Eastern Finland. No further ethical approval was required, as the experiments did not involve any in vivo treatment.
Supporting Information
Acknowledgments
We wish to thank Kaisu Riihinen, PhD for providing betulinic, oleanolic and ursolic acid for these studies. We are grateful for Ms. Taija Hukkanen, Ms. Satu Marttila and Ms. Tiina Koivunen for excellent technical assistance.
Data Availability
The authors confirm that all data underlying the findings are fully available without restriction. All data are included within the manuscript and/or Supporting Information.
Funding Statement
This research was supported by the Academy of Finland (grant 139620 to JTL, grant 139140 to TN, grants 256515 and 264020 to JYK), the European Commission (Contract no EU-KBBE-227239-ForestSpeCs to JYK), and the Finnish Cultural Foundation (RH). TL was supported by Biocenter Finland/DDCB. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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Associated Data
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Supplementary Materials
Data Availability Statement
The authors confirm that all data underlying the findings are fully available without restriction. All data are included within the manuscript and/or Supporting Information.