Abstract
Intrahepatic cholangiocarcinoma (ICC) is an aggressive cancer. Vitamin D supplementation is getting popular due to its anti-tumor functions after conversion to its active form, 1α,25(OH)2D. Here, we show that dietary supplementation with 6 IU/g of vitamin D greatly suppressed ICC initiation and progression without apparent toxicity in a chemically induced rat model. Microarray analysis of rat ICC tissues showed vitamin D supplementation modulated the expressions of several unique genes, including lipocalin 2 (Lcn2), confirmed by RT-qPCR and immunohistochemical (IHC) staining. Further, 53 of 80 human ICC specimens (66%) exhibited high LCN2 expression and LCN2 knockdown in SNU308 cells decreased cell growth and migration, suggesting LCN2 be an oncogene in human ICC. As human ICC SNU1079 cells were treated by 1α,25(OH)2D3, LCN2 expression and cell proliferation were attenuated. The downregulation of LCN2 expression was blunted when vitamin D receptor (VDR) was knocked down, implicating that the in vivo Lcn2 downregulation is a direct consequence of vitamin D supplementation
Our results support the prevailing concept that vitamin D status is negatively associated with cancer incidence and mortality and suggest LCN2 may be a potential target against ICC. Further studies of application of vitamin D or its analogs against ICC are warranted.
Keywords: cholangiocarcinoma, vitamin D, chemoprevention, LCN2, NGAL
INTRODUCTION
Cholangiocarcinoma (CCA), the second most common malignancy in the liver after hepatocellular carcinoma, originates from the epithelial lining of biliary tract [1-3] with increasing incidence and mortality recently [1-5]. Intrahepatic cholangiocarcinoma (ICC) originates from the small bile ducts within the liver. The survival of ICC is very poor in general and only surgical resection can provide a cure in the case of early stage of disease [6-8], which is rare due to the lack of early diagnostic methods. For unresectable ICC [9], the prognosis is dismal with the average survival of less than one year [10], attributable to the resistance to traditional chemotherapy and radiotherapy, Recently, target therapy has been shown to have potential being a promising strategy against CCA[11, 12]. Collectively, clinicians face a stalemate to deal with patients with advanced ICC. New therapeutic strategies to deal with ICC are indeed urgently needed.
Vitamin D, originally known to modulate calcium absorption and bone metabolism for nearly a century, is now shown to have potent antiproliferation, antiangiogenesis, anti-inflammation, pro-apoptosis, pro-differentiation, and immune-regulation in many cells through a cell- and tissue-specific manner [13-18]. Moreover, evidence associating vitamin D deficiency, defined as serum 25(OH)D concentration less than 20 ng/ml in human, with the increased incidence of prostate, colon and breast cancers in a number of ecological and epidemiological studies has been well documented [19-22], although some studies have questioned their association[23]. Vitamin D exerts its transcriptional regulation through binding to vitamin D receptor (VDR), which forms a hetorodimer with retinoid X receptor (RXR), and binds to vitamin D response element (VDRE) located in the promoter region of vitamin D responsive genes to transactive gene expression [24, 25]. Since VDR is present in almost all tissues studied, the application of vitamin D as a new generation of tumor preventive and therapeutic agents is plausible.
Regarding CCA, 1α,25(OH)2D, the active form of vitamin D, has been shown to inhibit CCA cell growth in vitro [26], and dysregulation of the local conversion of 25-hydroxyvitamin D to 1,25-dihydroxyvitamin D, the hormonal form of vitamin D, may lead to enhanced CCA [27]. Moreover, VDR expression has been demonstrated in cultured CCA cell lines and CCA tissues, in which high levels of expression were associated with good prognosis of CCA [26]. These findings suggest that vitamin D deserves further investigation against CCA. So far, no study concerning the application of dietary vitamin D supplementation against CCA in vivo has been published.
Previously we have established a thioacetamide (TAA)-induced rat ICC model [28], in which the tumors can be induced after feeding rats with TAA-containing water for 20 weeks. The model successfully recapitulates human ICC progression histologically. Furthermore, the tumor growth can be easily evaluated by a micro PET for small animals [29]. In this report, we investigated the effect of vitamin D supplementation with 2 IU/g and 6 IU/g vitamin D3 (cholecalciferol) on ICC via the TAA-induced ICC animal model. The potential underlying mechanisms were evaluated through cDNA microarray analysis and the possibly responsible gene was further verified in human ICC specimen and human ICC cell lines.
RESULTS
Measurement of body weight, serum calcium and 25(OH)D levels of rats
As described in the diagram shown in Fig. 1a, animals were divided into three groups (N=7 per group) and fed with a diet supplemented with no vitamin D3, 2 IU/g of vitamin D3, or 6 IU/g of vitamin D3 and kept from exposure to ultraviolet radiation b (UVB) to prevent endogenous vitamin D synthesis. Drinking water was replaced with water containing 0.03% TAA beginning in week 8.
The measurements of body weight, serum calcium and serum 25(OH)D were performed in week 1, 4, 6, 11, 17, 23, 26, and 31 for diets added with no vitamin D3 (-D), 2 IU/g (+2D) and 6 IU/g (+6D) vitamin D3 groups. No significant difference in body weight was observed among the three groups (Fig. 1b). All animals gained weight quickly until they drank TAA-containing water, and the increase of their body weight became more gradual afterward (Fig. 1b). Similarly, serum calcium stayed relatively unchanged and no significant difference was observed among the three groups during the entire study period (Fig. 1c). However, the serum 25(OH)D levels varied depending on the vitamin D3 amount in the diets (Fig. 1d). It increased from 40±3 to 60-70 nmol/L by week 4 and stayed in this range in the +6D group, whereas it remained relatively constant at about 43±3 nmol/L in the +2D group, and gradually declined from 40±3 to 26±4 nmol/L in the -D group.
Evaluation of tumor initiation and progression by position emission tomography (PET) scanning
Previously, we have shown that ICC can be induced in rats after drinking water containing 0.03% TAA for 20 weeks with a highly successful rate [28]. Weekly PET scan began in the 20th week after the initiation of TAA treatment. Figure 2a compares 2-deoxy-2-[F-18]fluro-D-glucose (FDG) images taken consecutively (1st to 6th scan) for 6 weeks between the -D and +6D groups. The scanning results from the 3 groups are summarized in Figure 2b. In the 1st scan, no rat bearing tumors was detected in the +6D group, while 2 and 4 rats were found bearing tumors in the +2D and -D groups, respectively. In the 5th and 6th scans, the +6D group had 3 rats with tumors, and +2D and -D groups each had 6 animals with tumors. Due to the limitation of micro PET to detect tumor with size < 2 mm and the indistinguishable border between normal tissues and invasive CCA, the standard tracer uptake value ratio (SUVR, tumor to liver) was obtained to represent tumor growth [29]. As shown in Figure 2c, the -D group had the highest SUVR in the 1st scan which increased gradually in the following scans during the study. The +2D group also showed increased SUVR but with a lower magnitude than the -D group. However, the SUVR for the +6D group stayed relatively unchanged and was significantly lower than the -D group in the 5th and 6th scans.
Genome-wide gene expression profile analysis for rat ICC tissues from –D, +2D and +6D animals
The potential mechanism involved in the vitamin D-dependent anti-ICC actions was investigated by microarray analyses using Rat OneArray® v1 to compare the gene expression profiles in tumors from these three groups of rats. As shown in Fig. 3a and 3b, vitamin D supplementation did induce indistinct gene expression profiles in vivo. (The methods and data analysis for microarray were described in the supplementary materials section). Among the downregulated genes, Lcn2 was found to be the most suppressed by vitamin D supplementation with a 38% and 50% reduction in expression, respectively, in the tumors from +2D and +6D rats compared to the -D rats (Table 1a and Supplemental Fig.S-1).
Table 1a. Genes affected by vitamin D supplementation.
Probe set ID | Gene name | Vitamin D supplementation | ||
---|---|---|---|---|
-D | +2D | +6D | ||
Up regulated | ||||
PH_rn_0012953 | Arsj | 0.25 | 0.77 | 1.35 |
PH_rn_0020767 | Ces1d | 0.41 | 0.81 | 0.81 |
PH_rn_0003591 | Havcr1 | 0.63 | 1.08 | 1.15 |
PH_rn_0001350 | Ccdc144b | 0.27 | 0.45 | 0.62 |
PH_rn_0003985 | Gucy1b2 | 0.34 | 0.80 | 1.31 |
PH_rn_0003024 | Aldh1l1 | 0.52 | 0.82 | 1.30 |
PH_rn_0022686 | NA | 0.80 | 1.59 | 2.72 |
PH_rn_0014388 | LOC287167 | 0.23 | 1.15 | 1.42 |
PH_rn_0014705 | Tnfsf4 | 0.63 | 1.10 | 1.29 |
PH_rn_0009406 | Pipox | 0.53 | 0.87 | 1.58 |
PH_rn_0010923 | Cyp7a1 | 0.35 | 0.82 | 1.64 |
PH_rn_0014336 | LOC305806 | 0.58 | 1.06 | 2.26 |
PH_rn_0004153 | Trim54 | 0.59 | 0.98 | 1.31 |
PH_rn_0003819 | Nr1i3 | 0.63 | 1.21 | 2.27 |
PH_rn_0016772 | Rergl | 0.67 | 1.16 | 1.80 |
PH_rn_0022202 | LOC100360253|LOC100364984 | 0.83 | 1.47 | 1.88 |
PH_rn_0002165 | Cyp2c11 | 0.17 | 0.95 | 1.66 |
PH_rn_0008613 | Sdr16c6 | 0.52 | 0.89 | 1.98 |
PH_rn_0018922 | Gkn3 | 0.95 | 1.34 | 2.01 |
PH_rn_0022007 | Wisp3 | 0.71 | 1.31 | 1.93 |
PH_rn_0001170 | LOC100360120 | 0.26 | 0.46 | 0.62 |
Down regulated | ||||
PH_rn_0020605 | Abcc1 | 1.61 | 1.06 | 0.77 |
PH_rn_0016277 | LOC686596 | 0.60 | 0.71 | 0.57 |
PH_rn_0001393 | Cd207 | 1.66 | 1.13 | 0.44 |
PH_rn_0001576 | Stra8 | 0.47 | 0.38 | 0.20 |
PH_rn_0007276 | Spink4 | 2.09 | 1.22 | 1.07 |
PH_rn_0003053 | Pdpk1 | 1.63 | 0.97 | 0.63 |
PH_rn_0020801 | RGD1565486 | 1.55 | 0.84 | 0.63 |
PH_rn_0010729 | Ereg | 1.31 | 1.06 | 0.82 |
PH_rn_0010578 | Lcn2 | 1.72 | 0.87 | 0.33 |
PH_rn_0002779 | Slc26a3 | 1.90 | 1.05 | 1.02 |
PH_rn_0008583 | Fkbp5 | 1.72 | 0.84 | 0.66 |
PH_rn_0015419 | Taar9 | 0.95 | 0.42 | 0.29 |
PH_rn_0002499 | LOC681122 | 0.34 | 0.33 | 0.20 |
PH_rn_0008827 | Cnnm1 | 0.34 | 0.20 | 0.16 |
PH_rn_0004742 | B3gat2 | 0.21 | 0.18 | 0.15 |
PH_rn_0009834 | Cts7 | 0.87 | 0.51 | 0.20 |
Table 1b. Pathways affected by vitamin D supplementation.
Signal Pathway | odds radio (loge) | p value | Adjusted p value | |
---|---|---|---|---|
Up regulated | ||||
Metabolism of xenobiotics by P450 | 2.58 | <0.0001 | <0.0001 | |
Drug metabolism - P450 | 2.87 | <0.0001 | <0.0001 | |
Metabolic pathways | 1.20 | <0.0001 | <0.0001 | |
Primary bile acid biosynthesis | 3.39 | <0.0001 | <0.0001 | |
PPAR signaling pathway | 2.53 | <0.0001 | <0.0001 | |
Glycosphingolipid biosynthesis | 2.85 | 0.0017 | 0.0192 | |
Retinol metabolism | 2.97 | <0.0001 | <0.0001 | |
Linoleic acid metabolism | 3.33 | <0.0001 | <0.0001 | |
Drug metabolism | 2.36 | <0.0001 | 0.0003 | |
Arachidonic acid metabolism | 2.40 | <0.0001 | <0.0001 | |
Down regulated | ||||
Retinol metabolism | 1.90 | 0.0005 | 0.0265 | |
ABC transporters | 2.19 | 0.0005 | 0.0265 | |
Biosynthesis of unsaturated fatty acids | 2.21 | 0.0017 | 0.0449 | |
Tyrosine metabolism | 2.38 | 0.0002 | 0.0265 | |
Focal adhesion | 1.33 | 0.0011 | 0.0337 | |
Taste transduction | 1.83 | 0.0020 | 0.0470 | |
mTOR signaling pathway | 2.15 | 0.0006 | 0.0265 | |
Glycosaminoglycan biosynthesis | 3.02 | 0.0010 | 0.0337 |
Verification of Lcn2 expression in rat ICC tissues and LCN2 expression in human ICC tissues
The downregulation of Lcn2 expression by vitamin D supplementation in vivo as indicated by microarray were confirmed by RT-qPCR (Fig. 3c) and IHC staining (Fig. 3d and 3e), which showed that both of Lcn2 mRNA and protein expressions were significantly reduced in ICC tumors from +6D group compared to those from -D group. We further examined 80 human ICC tissues and found that 53 (66%) specimens exhibited high LCN2 expression compared to the non-tumorous bile ducts (Supplemental Fig S-2).
Evaluation of the expression of VDR, and antiproliferative effect of 1α, 25(OH)2D3 on Human ICC cell line, SNU 1079
We utilized a human ICC cell line, SNU1079, a VDR-expressing cell lines (Fig 4a), to investigate whether this cell line was responsive to the antiproliferative effect of 1α,25(OH)2D3. As shown in Figure 4b, 1α,25(OH)2D3 significantly inhibited SNU1079 cell growth in a dose-dependent manner at the concentrations from 10−10 to 10−6 M after 4 days of treatment.
Evaluation of the effect of 1α, 25(OH)2D3 on LCN2 expression in SNU1079 cells
We next investigated whether human LCN2 expression was regulated by 1α,25(OH)2D3 and whether the effect was mediated through VDR in SNU1079 cells. Using RT-qPCR and western blot analyses, we found that 1α,25(OH)2D3 caused a dose-dependent downregulation of LCN2 mRNA and protein expression in SNU1079 cells with dramatic upregulation of CYP24 mRNA expression, the most inducible gene expression by 1α,25(OH)2D3 (Fig. 4c and 4d). Furthermore, we showed that VDR knockdown by shRNA blunted the 1α,25(OH)2D3-dependent LCN2 mRNA downregulation (Fig. 4e). Given that the added FBS in cell culture medium contained some amount of 1α,25(OH)2D3, the higher LCN2 expression in SNU-VDRsi cells than that of SNU-COLsi cells also indicated the downregulation of LCN2 by 1α,25(OH)2D3 is VDR-mediated (Fig 4e).Consequently, we concluded that LCN2 expression is regulated by 1α,25(OH)2D3 and is mediated through VDR in SNU1079 cells.
Evaluation LCN2 effect on cell growth and migration of SNU308 cells
To further determine LCN2 effect on human CCA cells, we knockdowned LCN2 in another CCA cell line, SNU308, and obtained SNU-COLsi cells (mock knockdown SNU308 cells) and SNU-NGALsi cells (LCN2 knockdwon SNU308 cells)(Figure S-3). The cell doubling time was calculated by two time points of cell number. The cell doubling time was increased to 30.45 hours from 23.6 hours and the migration ability is significantly repressed in SNU308 cells after LCN2 knockdown (Fig 4f).
DISCUSSION
CCA is a devastating disease with increasing incidence and mortality in recent years and with very few therapeutic options [3-5]. Since the active form of vitamin D, 1α,25(OH)2D3 or calcitriol, has been well demonstrated to be a pleiotropic hormone with a variety of anti-tumor actions [17, 30], combined with the fact that vitamin D deficiency has been associated with a number of cancers incidence [22], we thus investigated whether vitamin D supplementation could benefit the prevention of ICC initiation and progression under the bleak background of ICC treatment. Using microarray approach, a recent publication reported that vitamin D supplementation to normal subjects can affect many cancer related genes [31], supporting the epidemiological findings that vitamin D-deficiency may be associated with many forms of cancer [22], and also suggests the importance of adequate vitamin D nutrition in preventing cancers. Because of the concern about the UV-induced skin cancers, humans have not generated sufficient vitamin D from sunlight exposure and increasingly depend on the dietary supplementation. However, how much vitamin D do we really need to prevent cancers is still unknown [32].
In this study, we showed that the rat serum 25(OH)D level, the best index of vitamin D status, changed with time depending on the contents of vitamin D in their diets (Fig. 1d). As shown, supplementation with 6 IU/g vitamin D3 increased the serum 25(OH)D to a much higher level (about 50% increase), whereas there was a gradual decline to vitamin D-deficient state in the -D animals. There was no significant changes in serum 25(OH)D in the +2D group fed with 2 IU/g vitamin D3 diet. In spite of differences in serum 25(OH)D levels among the three groups, there was no significant difference in their body weight and serum calcium over the course of study (Fig. 1b and 1c). This observation, showing no adverse effects on body weight and serum calcium, indeed indicates that supplementation with 6 IU/g of vitamin D3 did not cause unwanted side-effects even though they had serum 25(OH)D higher than the normal range [33]. Furthermore, the lack of increase in serum calcium in 6 IU/g group demonstrates that any anti-ICC effects observed in this group are most likely a direct consequence of vitamin D supplementation, and not a secondary effect attributable to calcium [34, 35].
Our data, for the first time, clearly showed an anti-ICC initiation and progression (Fig. 2a, b and c) by supplementing animals with 6 IU/g of vitamin D3 which also raised their serum 25(OH)D level to between 60 and 70 nmol/L (Fig. 1d) in this TAA-induced rat ICC model. The tumor incidence and tumor progression in –D and +2D groups are similar (Fig 2b&c), whereas +6D group has significantly lower tumor incidence and progression as compared to –D group (Fig. 2a, b, &c). Since the vitamin D content in the regular rat chows which contain 2.2 IU/g vitamin D [33] is comparable to our special 2 IU/g diet, apparently, the normal level of vitamin D in the diet or normal circulating level [33] of 25(OH)D may not be sufficient for preventing ICC tumor initiation and progression (Fig. 2a, b, &c). This finding is consistent with a prevailing view that a higher level of dietary reference intakes (DRI) than what is needed for bone health [36] may be required for the prevention of cancers and other chronic diseases[22, 32, 37].
Functional genomic analyses will probably have multiple implications for candidate drug discovery against targeted genes. At the present time, 408 upregulated and 230 downregulated genes have been identified as potential vitamin D targets by the use of chromatin immune-precipitation DNA sequencing (ChiP-seq) analysis [38]. Thus, to further understand the underlying mechanisms whereby vitamin D exerts its chemopreventive and chemotherapeutic effects on ICC, cDNA microarray was conducted. By using the Rat OneArray® which covers 24,358 well-substantiated rat transcripts, we performed the genome-wide mRNA microarray on ICC tumors from each of the three groups under study. The arrays demonstrate a unique expression profile pattern for the triplicate samples from each group (Fig. 3a & b), indicating different vitamin D supplementations did change the gene expression profile. After a series of bioinformatical analyses [39] (Please reference the supplemental material and method), we identified 21 and 16 genes which were significantly upregulated and downregulated, respectively, in response to vitamin D3 supplementation (Table 1a). Signal pathway analysis showed the vitamin D-upregulated pathways are mainly involved in fatty acid, bile acid, vitamin A and drug metabolic pathways, whereas the vitamin D-downregulated pathways include those responsible for mTOR signaling pathway, glycosaminoglycan biosynthesis, adhesion, tyrosine, vitamin A and fatty acid metabolic pathways (Table 1b).These genes or pathways might be used as targets for finding novel drug for cholangiocarcinoma treatment, and be used in clinical diagnosis in the future studies.
Among the downregulated genes found in our microarray analysis, LCN2 was found to be the most suppressed by vitamin D supplementation. The results of IHC staining and RT-qPCR of TAA-induced rat ICC tissues confirmed the microarray data (Fig 3c,d,&e). LCN2, a member of lipocalin family that transports small, hydrophobic ligands, is a 25-kDa glycoprotein originally isolated from human neutrophils, therefore, it is commonly known as neutrophil gelatinase-associated lipocalin (NGAL) [40]. The protein is also known as neu-related lipocalin, aka SIP24, oncogene 24p3, uterocalin and siderocalin [40]. It is expressed in several normal tissues where its roles are mainly to protect against bacterial infection and oxidative stress [41]. LCN2 expression is dysregulated in some benign and malignant diseases, and has been shown to play multifaceted roles in cancer in a cell lineage specific manner [42]. In malignant cells, its functions may include inhibiting apoptosis, promoting invasion and angiogenesis, and increasing proliferation and metastasis. The levels of LCN2 have also been shown to be elevated by several orders of magnitude during injury, infection and malignancy, indicating a role it may play in tumor development [41, 42].
Regarding cholangiocarcinoma (CCA), a study reported that LCN2 expression was detected in the CCA cell line, HuCCA-1, but not in 4 hepatocellular carcinoma cell lines, HepG2, HCC-S102, SK-Hep-1, and Alexander, suggesting the expression might be specific to CCA [43]. It has also been found that serum LCN2 levels were significantly elevated in ICC patients compared to those with benign biliary tract disease [44]. In a separate study, no significant differences were found in sera between malignant and benign biliary patients, whereas elevated LCN2 levels were detected in bile collected from the ICC patients [45]. Moreover, the roles of LCN2 in ICC have been studied by knocking down LCN2 with siRNA that resulted in a significant reduction in invasiveness, migration and pro-MMP-9 activity of ICC cells [46].
To further verify LCN2 role in human ICC, we examined 80 human ICC specimen and 66% of human ICC specimen presented with high expression LCN2, adding the finding that knockdown of LCN2 in SNU308 cells decreased cell growth and migration (Fig 4f), indicating the LCN2 plays as an oncogene in human ICC. In addition, as application of 1α,25(OH)2D3 to treat human ICC SNU1079 cells, which express VDR (Fig. 4a), a dose dependent antiproliferation and downregulation of LCN2 mRNA and protein expressions was observed (Fig.4b,c,&d). Of note, as most cancer cells respond to 10−8M 1α,25(OH)2D3 [17], 10−10M 1α,25(OH)2D3 significantly inhibited SNU1079 cell growth (Fig 4b), implicating the much more sensitivity of SNU1079 cells to 1α,25(OH)2D3 as compared to other cancer cells. Since 1α,25(OH)2D3 exerts its genomic function through binding with VDR, we next knocked down VDR in SNU1079 cells and the inhibition of LCN2 expression by 1α,25(OH)2D3 was attenuated (Fig. 4e), indicating this effect of 1α,25(OH)2D3 is VDR-dependent, which is also supported by the finding that the SNU-VDRsi cells presented with higher LCN2 expression as compared to that of SNU-COLsi cells since the added FBS in cell culture medium contained some amount of 1 α,25(OH)2D3 (Fig 4e). These finding further suggested that the in vivo downregulation of LCN2 in this current animal model is the direct consequence of vitamin D supplementation.
Collectively, we concluded that LCN2 is an oncogene in human ICC and its expression is repressed by 1α,25(OH)2D3 VDR-dependently. Thus, the downregulation of Lcn2 in rats ICC tissues is supposed to be a direct sequence by vitamin D supplementation, leading to the observed in vivo anti-ICC tumorgenesis. Our present results are consistent with previous studies suggesting that 1α,25(OH)2D3 and its analogs are able to inhibit ICC tumor growth in vitro and in vivo [47-49].
In summary, we demonstrated in this report that vitamin D in a form of dietary supplementation can prevent and suppress ICC tumorigenesis and progression with downregulation of LCN2 in an animal model without inducing hypercalcemia. Furthermore, the results showing that the high expression of LCN2 in human ICC specimen, the decreased proliferation and migration of SNU308 cells after LCN2 knockdown, and the 1α,25(OH)2D3-induced antiproliferative effect and VDR-dependent downregulation of LCN2 in SNU1079 cells, strongly suggest LCN2 may be a new target against human CCA. Thus, based on our results, we concluded that maintaining adequate vitamin D status has the potential to be an inexpensive and effective approach against ICC. Further investigations to determine the optimal amounts of vitamin D supplementation required for cancer prevention and the application of vitamin D and its D analogs for the treatment of ICC are warranted.
MATERIALS AND METHODS
Induction of intrahepatic cholangiocarcinoma (ICC) in rats
Male Sprague-Dawley (SD) rats weighting 250 ± 14 g were obtained from BioLasco Taiwan Co., Ltd (Taipei, Taiwan). Animals were divided into three groups (N=7 per group) and fed with a diet supplemented with no vitamin D3 (cat. # 5A0E), 2 IU/g of vitamin D3 (cat.# 5A0G), or 6 IU/g of vitamin D3 (cat. # 5A0J) obtained from TestDiet (Richmond, IN, USA). Animals were housed in an animal room with a 12-hour incandescence light and dark cycle at an ambient temperature of 22°C with food and water available ad libitum, and avoid of any natural sunlight and fluorescence lighting during the course of study. The animal protocol was approved by the Experimental Animal Ethics Committee of Chang Gung Memorial Hospital (Approval: IACUC 2011081901) Beginning in week 8, drinking water was replaced with water containing 0.03% TAA.
Measurements of body weight, serum calcium and serum 25-hydroxyvitamin D [25(OH)D]
Measurement of body weight and blood drawing for calcium and 25(OH)D analyses were taken upon the arrival of animals and in week 4, 6, 11, 17, 23, 26, and 31. Serum calcium and serum 25(OH)D were analyzed using kits obtained from Stanbio Laboratory (CALCIUM LIQUICOLOR® (ARSENAZO) (#0155-225, Stanbio Laboratory, TX, USA)) and from DiaSorin (25-Hydroxyvitamin D 125I RIA kit (#68100E, DiaSorin, MN, USA)), respectively. The calcium kit has intra- and inter-assay coefficient of variation of 0.7 and 0.9%, respectively. The 25(OH)D assay kit has intra- and inter-assay cv of 8.2 and 10.5%, respectively. The limit of detection is 1.5 ng/ml for 25(OH)D and 1mg/dl for calcium.
Detection of TAA-induced ICC tumors by position emission tomography (PET) and histopathological evaluation of the liver
The detection of ICC tumors was accomplished by injecting 2-deoxy-2-[F-18]fluoro-D-glucose (FDG) 90 minutes prior to PET scan which was performed on an Inveon™ system (Siemens Medical Solutions, Inc. USA) located in the Molecular Image Center of Chang Gung Memorial Hospital as described previously [29]. Scan was carried out once a week for six consecutive weeks beginning in the 20th week after the addition of TAA into the drinking water. Quantification of 18F-FDG uptakes in the biggest liver tumor and normal liver tissue was performed by calculating the standardized uptake value (SUV) as previously described [29].
Microarray analysis of ICC
Three TAA induced cholangiocarcinoma samples from each group of rats fed with a diet supplemented with no vitamin D, 2 IU/g vitamin D3 or 6 IU/g vitamin D3 were used for microarray analysis. Rat OneArray® v1 (Phalanx Biotech Group, Hsinchu, Taiwan) was chosen for its reproducibility in examining the quantitative and qualitative expression of most genes in the rat genome. Following a quantitative scan of a chip, the images were transformed to text files containing intensity information by Phalanx® and the microarray data were analyzed by using the GeneSpring® GX 7.3.1 Software (Agilent Technologies, Santa Clara, CA, USA). The further descriptions were shown in supplementary materials.
Immunohistochemical staining (IHC) of rat and human ICC tissues for LCN2
Human ICC tumors were obtained from patients admitted to the Chang Gung Memorial Hospital. The protocol was approved by the IRB of the Chang Gung Memorial Hospital (Approval: IRB 99-2886B). The detailed procedures were dercribed in the supplemental material section.
Cell culture
SNU1079 cells and SNU308 cells were obtained from Korean Cell Line Bank (KCLB: 28 Yongon-dong, Chongno-gu, Seoul 110-744, Korea). Cells were grown on RPMI 1640 medium supplemented with 10% FBS and 1% antibiotic-antimycotic agents. Culture medium was changed 3 times per week.
Knockdown of VDR and real-time qPCR of LCN2 expression in Human ICC SNU1079 cells
SNU1079 cells were transduced with control non-target shRNA lentiviral particles (SI-SHC002V, Sigma, MO, USA) or vitamin D receptor (VDR) shRNA lentiviral particles (SI-NM_000376.1-578s1, Sigma). Four days after transduction, the cells (SNU-COLsi and SNU-VDRsi) were treated with 10-7 M of 1α,25(OH)2D3 or control vehicle for 24 hours. Total RNA was isolated using the Trizol reagent, and cDNA was synthesized using the Superscript III preamplification system (Invitrogen). FAM dye-labeled TaqMan MGB probes and PCR primers for human LCN2 (HS00194353-m1), CYP24A1 (HS00167999-m1), and VDR (HS01045844-m1) were purchased from Applied Biosystems. For the internal positive control, GAPDH (HS99999905-m1) was used with a FAM reporter dye-labeled TaqMan MGB probe. Mean cycle threshold (Ct) values for LCN2, CYP24A1, and VDR were normalized against the GAPDH control probe to calculate ΔCt values using StepOne software v2.0 (Applied Biosystems).
Knockdown of LCN2 in human ICC SNU308 cells
SNU308 cells were transducted with control small hairpin RNA lentiviral particles (Sc-10808-V, Santa Cruz Biotechnology) or NGAL small hairpin RNA lentiviral particles (Sc-43969-V, Santa Cruz Biotechnology) according to the manufacturer's instructions. Two days after transduction, the cells (SNU-COLsi and SNU-NGALsi) were selected by incubation with 10 μg/ml puromycin dihydrochloride for another 3 generations.
Real-time qPCR (RT-qPCR) and western blot analysis of rat tumors
Total RNA extraction and RT-qPCR (Lcn2 primer: All-in-One™ qPCR Primer, #RQP052324, GeneCopoeia, Rockville, MD, U.S.A.) were performed as described in the previous section. The procedures for protein extraction, blocking, and detection for western blot were performed as the manufacture guideline. The primary antibodies used in this study were LCN2 polyclonal antibody (#PAB9543, 1:1000, Abnova Corporation, Taipei, Taiwan). The secondary antibodies were Goat Anti-Rabbit IgG (H+L) HRP Antibody (#3053-1, 1:10000, Epitomics, CA, USA).
Cell proliferation assay by WST-1 kit
SNU1079 cells were plated at about 1,000 cells per cm2 in a Costar® 48 Well Clear TC-Treated Multiple Well Plates (#3548, Corning Incorporated, NY, USA). The cells were treated with ethanol vehicle (control group) or 1α,25(OH)2D3 at the indicated concentrations. The viable cells were measured by Cell Proliferation Reagent WST-1 (#11 644 807 001, Roche Diagnostrics, Mannheim, Germany).
Trans-well filter migration assay
SNU-COLsi and SNU-NGALsi cells were seeded on each trans-well filter with 8.0-μm pores (Costar, Cambridge, MA, USA). The upper chamber was filled with 250 μl serum-free DMEM and the lower chamber was filled with 600 μl DMEM with 10% FBS. These cells were allowed to migrate at 37°C in an atmosphere of 95% air-5% CO2 for 16 h. Cells that migrated through the pores were stained with Liu's stain and washed with 1xPBS twice. Then the cells on the lower surface of the filter were counted under four random high-power microscopic fields (HPF;100X) per filter, and the mean number of cells that migrated through the filter was calculated for each condition. The experiments were performed in triplicates.
Statistical analysis
OneWay ANOVA with Post Hoc test was used for the statistical analysis of SUV for 18F-FDG uptakes among the three treatment groups during PET scanning. For human LCN2 IHC staining comparison, the differences among the three groups were analyzed by Kruskal-Wallis test, whereas the difference between each two groups were analyzed by Dunn's Multiple Comparison Test. The Student t-test was used for the statistic analyses of serum calcium, serum 25(OH)D, body weight and in vitro experiments. P-value<0.05 was considered as a significant difference. The program of Excel 2007 or SPSS statistical software for Windows (SPSS version 10.0, Chicago, IL, USA) were employed to conduct statistical analysis.
SUPPLEMENTARY MATERIAL AND FIGURES
Acknowledgments
The authors express their thanks to the Molecular Image Center, Chang Gung Memorial Hospital, Taoyuan, Taiwan for conducting animal PET scanning, and Core Facilities for Gene Expression Analysis, Institute of Systems Biology and Bioinformatics, College of Science, National Central University, Taoyuan, Taiwan, for microarray analysis.
The study was supported in part by grants from Chang Gung Medical Research Program (CMRPG2A0322 to KCC, CMRPG3B0362 and CMRPG3B0532 to CNY, CMRPG2D0191, and CMRPG2D0192 to KCC), from National Science Council, ROC (NSC102-2320-B-182-003-MY3 to HHJ, NSC101-2320-B-008-001-MY3 to LJS)
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