Abstract
Novel species of fungi described in the present study include the following from Australia: Neoseptorioides eucalypti gen. & sp. nov. from Eucalyptus radiata leaves, Phytophthora gondwanensis from soil, Diaporthe tulliensis from rotted stem ends of Theobroma cacao fruit, Diaporthe vawdreyi from fruit rot of Psidium guajava, Magnaporthiopsis agrostidis from rotted roots of Agrostis stolonifera and Semifissispora natalis from Eucalyptus leaf litter. Furthermore, Neopestalotiopsis egyptiaca is described from Mangifera indica leaves (Egypt), Roussoella mexicana from Coffea arabica leaves (Mexico), Calonectria monticola from soil (Thailand), Hygrocybe jackmanii from littoral sand dunes (Canada), Lindgomyces madisonensis from submerged decorticated wood (USA), Neofabraea brasiliensis from Malus domestica (Brazil), Geastrum diosiae from litter (Argentina), Ganoderma wiiroense on angiosperms (Ghana), Arthrinium gutiae from the gut of a grasshopper (India), Pyrenochaeta telephoni from the screen of a mobile phone (India) and Xenoleptographium phialoconidium gen. & sp. nov. on exposed xylem tissues of Gmelina arborea (Indonesia). Several novelties are introduced from Spain, namely Psathyrella complutensis on loamy soil, Chlorophyllum lusitanicum on nitrified grasslands (incl. Chlorophyllum arizonicum comb. nov.), Aspergillus citocrescens from cave sediment and Lotinia verna gen. & sp. nov. from muddy soil. Novel foliicolous taxa from South Africa include Phyllosticta carissicola from Carissa macrocarpa, Pseudopyricularia hagahagae from Cyperaceae and Zeloasperisporium searsiae from Searsia chirindensis. Furthermore, Neophaeococcomyces is introduced as a novel genus, with two new combinations, N. aloes and N. catenatus. Several foliicolous novelties are recorded from La Réunion, France, namely Ochroconis pandanicola from Pandanus utilis, Neosulcatispora agaves gen. & sp. nov. from Agave vera-cruz, Pilidium eucalyptorum from Eucalyptus robusta, Strelitziana syzygii from Syzygium jambos (incl. Strelitzianaceae fam. nov.) and Pseudobeltrania ocoteae from Ocotea obtusata (Beltraniaceae emend.). Morphological and culture characteristics along with ITS DNA barcodes are provided for all taxa.
Keywords: ITS DNA barcodes, LSU, novel fungal species, systematics
Overview Basidiomycota phylogeny
First of 12 equally most parsimonious trees obtained from the LSU alignment (215 parsimony-informative, 131 parsimony-uninformative and 463 constant characters) based on a heuristic analysis with simple taxon additions and tree-bisection-reconnection algorithm using PAUP v. 4.0b10 (TL = 673, CI = 0.719, RI = 0.852, RC = 0.613). GenBank accession numbers are indicated behind the species names. Bootstrap support values > 50 % from 100 000 fast replicates are shown at the nodes and the scale bar indicates the number of changes. Families, orders and classes are indicated with coloured blocks to the right of the tree. Strict consensus branches are indicated with thickened lines. The tree was rooted to Saccharomyces cerevisiae (GenBank Z73326) and the novel species described in this study for which LSU sequence data were available are indicated in bold face. The alignment and tree were deposited in TreeBASE (Submission ID 18408).
Overview Sordariomycetes phylogeny
First of 260 equally most parsimonious trees obtained from the LSU alignment (213 parsimony-informative, 115 parsimony-uninformative and 453 constant characters) based on a heuristic analysis with simple taxon additions and tree-bisection-reconnection algorithm using PAUP v. 4.0b10 (TL = 939, CI = 0.520, RI = 0.891, RC = 0.463). GenBank accession numbers are indicated behind the species names. Bootstrap support values > 50 % from 100 000 fast replicates are shown at the nodes and the scale bar indicates the number of changes. Families, orders and classes are indicated with coloured blocks to the right of the tree. Strict consensus branches are indicated with thickened lines. The tree was rooted to Saccharomyces cerevisiae (GenBank Z73326) and the novel species described in this study for which LSU sequence data were available are indicated in bold face. The alignment and tree were deposited in TreeBASE (Submission ID 18408).
Overview Dothideomycetes and other classes phylogeny
First of 1 000 equally most parsimonious trees obtained from the LSU alignment (308 parsimony-informative, 44 parsimony-uninformative and 417 constant characters) based on a heuristic analysis with simple taxon additions and tree-bisection-reconnection algorithm using PAUP v. 4.0b10 (TL = 1 536, CI = 0.414, RI = 0.844, RC = 0.349). GenBank accession numbers are indicated behind the species names. Bootstrap support values > 50 % from 100 000 fast replicates are shown at the nodes and the scale bar indicates the number of changes. Families, orders and classes are indicated with coloured blocks to the right of the tree. Strict consensus branches are indicated with thickened lines. The tree was rooted to Saccharomyces cerevisiae (GenBank Z73326) and the novel species described in this study for which LSU sequence data were available are indicated in bold face. The alignment and tree were deposited in TreeBASE (Submission ID 18408).
Acknowledgments
Michel Heykoop, Gabriel Moreno and Pablo Alvarado wish to express their gratitude to Dr L. Örstadius for kindly sending them Swedish material of Psathyrella effibulata and P. complutensis as well as colour photographs and notes; to Dr L. Monje and Mr A. Pueblas of the Department of Drawing and Scientific Photography at the University of Alcalá for their help in the digital preparation of the photographs; to Dr J. Rejos, curator of the AH herbarium for his assistance with the specimens examined. The research of Miroslav Kolařík and Alena Nováková was supported through a grant from the Czech Science Foundation (P506-12-1064). Rosa M. V. Sanhueza, Amauri Bogo, C. André Lévesque, Tharcisse Barasubiye and Tara Rintoul acknowledge Dr Patricia Ritschel (EMBRAPA, Brazilian Corporation of Agricultural Research) and Carla Comparin (Santa Catarina State University) for their assistance with the description of Neofabraea brasiliensis. Juan Carlos Zamora thanks Yolanda Ruiz (UTAI, Real Jardín Botánico-CSIC) for her technical assistance with the SEM, Guillermo Rolón (IAA, FADU-UBA) for the photograph of the habitat, and financial support from the Consejo Superior de Investigaciones Científicas (Jae-Pre 2010). Rohit Sharma acknowledges support from the Department of Biotechnology, New Delhi, for funding the Microbial Culture Collection (MCC), NCCS, Pune, India (BT/PR10054/NDB/52/94/2007) and Mr Mitesh Khairnar (MCC, Pune) for photographs. Renée Lebeuf, Greg Thorn, David Boertmann and Andrus Voitk, owe thanks to Bill Roody for collecting samples of Hygrocybe andersonii, Hashini Puwakgolle for sequencing work and Michael Burzynski, Phyllis Mann, Henry Mann, Anne Marceau and Maria Voitk for help and companionship on the collecting trip to Labrador. We also thank the CBS technical staff, A. van Iperen (cultures), M. Vermaas (photographic plates) and M. Starink-Willemse (DNA isolation, amplification and sequencing) for their invaluable assistance.
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