Skip to main content
Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 1990 Nov;87(22):8965–8969. doi: 10.1073/pnas.87.22.8965

Site-directed mutagenesis of conserved cysteine residues in Escherichia coli fumarate reductase: modification of the spectroscopic and electrochemical properties of the [2Fe-2S] cluster.

M T Werth 1, G Cecchini 1, A Manodori 1, B A Ackrell 1, I Schröder 1, R P Gunsalus 1, M K Johnson 1
PMCID: PMC55081  PMID: 2174169

Abstract

Site-directed mutants of Escherichia coli fumarate reductase in which each of the four N-terminal cysteine residues in the FrdB subunit, residues 57, 62, 65, and 77, was mutated individually to serine have been constructed, overexpressed, and investigated in terms of enzymatic activity as well as the EPR and redox properties of the iron-sulfur centers. In each case, the mutant contains a functional fumarate reductase in which all three of the constituent iron-sulfur clusters (i.e., center 1, [2Fe-2S]; center 2, [4Fe-4S]; center 3, [3Fe-4S]) have been assembled. The mutations affect the properties of center 1 only and demonstrate that the anomalously high redox potential of this [2Fe-2S] center is essential for optimal enzymatic activity. The results are consistent with cysteines 57, 62, 65, and 77 providing the ligands to center 1 but leave open the possibility of noncysteinyl coordination for the localized valence Fe(III) site of the reduced cluster. The implications of the results for the role of center 1 in the electron-transfer pathway and the valence localization of reduced center 1 are discussed.

Full text

PDF
8965

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. AEvarsson A., Hederstedt L. Ligands to the 2Fe iron-sulfur center in succinate dehydrogenase. FEBS Lett. 1988 May 23;232(2):298–302. doi: 10.1016/0014-5793(88)80757-9. [DOI] [PubMed] [Google Scholar]
  2. Bertrand P., Gayda J. P. A theoretical interpretation of the variations of some physical parameters within the [2Fe-2S] ferredoxin group. Biochim Biophys Acta. 1979 Jul 25;579(1):107–121. doi: 10.1016/0005-2795(79)90091-6. [DOI] [PubMed] [Google Scholar]
  3. Blaut M., Whittaker K., Valdovinos A., Ackrell B. A., Gunsalus R. P., Cecchini G. Fumarate reductase mutants of Escherichia coli that lack covalently bound flavin. J Biol Chem. 1989 Aug 15;264(23):13599–13604. [PubMed] [Google Scholar]
  4. Cammack R., Chapman A., McCracken J., Cornelius J. B., Peisach J., Weiner J. H. Electron spin-echo spectroscopic studies of Escherichia coli fumarate reductase. Biochim Biophys Acta. 1988 Oct 12;956(3):307–312. doi: 10.1016/0167-4838(88)90148-3. [DOI] [PubMed] [Google Scholar]
  5. Cammack R., Patil D. S., Weiner J. H. Evidence that centre 2 in Escherichia coli fumarate reductase is a [4Fe-4S]cluster. Biochim Biophys Acta. 1986 Apr 22;870(3):545–551. doi: 10.1016/0167-4838(86)90264-5. [DOI] [PubMed] [Google Scholar]
  6. Cecchini G., Ackrell B. A., Deshler J. O., Gunsalus R. P. Reconstitution of quinone reduction and characterization of Escherichia coli fumarate reductase activity. J Biol Chem. 1986 Feb 5;261(4):1808–1814. [PubMed] [Google Scholar]
  7. Cecchini G., Thompson C. R., Ackrell B. A., Westenberg D. J., Dean N., Gunsalus R. P. Oxidation of reduced menaquinone by the fumarate reductase complex in Escherichia coli requires the hydrophobic FrdD peptide. Proc Natl Acad Sci U S A. 1986 Dec;83(23):8898–8902. doi: 10.1073/pnas.83.23.8898. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Cole S. T., Condon C., Lemire B. D., Weiner J. H. Molecular biology, biochemistry and bioenergetics of fumarate reductase, a complex membrane-bound iron-sulfur flavoenzyme of Escherichia coli. Biochim Biophys Acta. 1985 Dec;811(4):381–403. doi: 10.1016/0304-4173(85)90008-4. [DOI] [PubMed] [Google Scholar]
  9. Cole S. T., Grundström T., Jaurin B., Robinson J. J., Weiner J. H. Location and nucleotide sequence of frdB, the gene coding for the iron-sulphur protein subunit of the fumarate reductase of Escherichia coli. Eur J Biochem. 1982 Aug;126(1):211–216. doi: 10.1111/j.1432-1033.1982.tb06768.x. [DOI] [PubMed] [Google Scholar]
  10. Cole S. T. Nucleotide sequence and comparative analysis of the frd operon encoding the fumarate reductase of Proteus vulgaris. Extensive sequence divergence of the membrane anchors and absence of an frd-linked ampC cephalosporinase gene. Eur J Biochem. 1987 Sep 15;167(3):481–488. doi: 10.1111/j.1432-1033.1987.tb13362.x. [DOI] [PubMed] [Google Scholar]
  11. Condon C., Cammack R., Patil D. S., Owen P. The succinate dehydrogenase of Escherichia coli. Immunochemical resolution and biophysical characterization of a 4-subunit enzyme complex. J Biol Chem. 1985 Aug 5;260(16):9427–9434. [PubMed] [Google Scholar]
  12. Darlison M. G., Guest J. R. Nucleotide sequence encoding the iron-sulphur protein subunit of the succinate dehydrogenase of Escherichia coli. Biochem J. 1984 Oct 15;223(2):507–517. doi: 10.1042/bj2230507. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Dugad L. B., La Mar G. N., Banci L., Bertini I. Identification of localized redox states in plant-type two-iron ferredoxins using the nuclear Overhauser effect. Biochemistry. 1990 Mar 6;29(9):2263–2271. doi: 10.1021/bi00461a009. [DOI] [PubMed] [Google Scholar]
  14. Gibson J. F., Hall D. O., Thornley J. H., Whatley F. R. The iron complex in spinach ferredoxin. Proc Natl Acad Sci U S A. 1966 Sep;56(3):987–990. doi: 10.1073/pnas.56.3.987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Gurbiel R. J., Batie C. J., Sivaraja M., True A. E., Fee J. A., Hoffman B. M., Ballou D. P. Electron-nuclear double resonance spectroscopy of 15N-enriched phthalate dioxygenase from Pseudomonas cepacia proves that two histidines are coordinated to the [2Fe-2S] Rieske-type clusters. Biochemistry. 1989 May 30;28(11):4861–4871. doi: 10.1021/bi00437a051. [DOI] [PubMed] [Google Scholar]
  16. Hanahan D. Studies on transformation of Escherichia coli with plasmids. J Mol Biol. 1983 Jun 5;166(4):557–580. doi: 10.1016/s0022-2836(83)80284-8. [DOI] [PubMed] [Google Scholar]
  17. Ingledew W. J., Poole R. K. The respiratory chains of Escherichia coli. Microbiol Rev. 1984 Sep;48(3):222–271. doi: 10.1128/mr.48.3.222-271.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Johnson M. K., Kowal A. T., Morningstar J. E., Oliver M. E., Whittaker K., Gunsalus R. P., Ackrell B. A., Cecchini G. Subunit location of the iron-sulfur clusters in fumarate reductase from Escherichia coli. J Biol Chem. 1988 Oct 15;263(29):14732–14738. [PubMed] [Google Scholar]
  19. Johnson M. K., Morningstar J. E., Cecchini G., Ackrell B. A. Detection of a tetranuclear iron-sulfur center in fumarate reductase from Escherichia coli by electron paramagnetic resonance spectroscopy. Biochem Biophys Res Commun. 1985 Sep 16;131(2):756–762. doi: 10.1016/0006-291x(85)91303-8. [DOI] [PubMed] [Google Scholar]
  20. Johnson M. K., Morningstar J. E., Cecchini G., Ackrell B. A. In vivo detection of a three iron cluster in fumarate reductase from Escherichia coli. Biochem Biophys Res Commun. 1985 Sep 16;131(2):653–658. doi: 10.1016/0006-291x(85)91287-2. [DOI] [PubMed] [Google Scholar]
  21. Jones H. M., Gunsalus R. P. Transcription of the Escherichia coli fumarate reductase genes (frdABCD) and their coordinate regulation by oxygen, nitrate, and fumarate. J Bacteriol. 1985 Dec;164(3):1100–1109. doi: 10.1128/jb.164.3.1100-1109.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Kassner R. J., Yang W. A theoretical model for the effects of solvent and protein dielectric on the redox potentials of iron-sulfur clusters. J Am Chem Soc. 1977 Jun 22;99(13):4351–4355. doi: 10.1021/ja00455a024. [DOI] [PubMed] [Google Scholar]
  23. Kita K., Vibat C. R., Meinhardt S., Guest J. R., Gennis R. B. One-step purification from Escherichia coli of complex II (succinate: ubiquinone oxidoreductase) associated with succinate-reducible cytochrome b556. J Biol Chem. 1989 Feb 15;264(5):2672–2677. [PubMed] [Google Scholar]
  24. Lauterbach F., Körtner C., Albracht S. P., Unden G., Kröger A. The fumarate reductase operon of Wolinella succinogenes. Sequence and expression of the frdA and frdB genes. Arch Microbiol. 1990;154(4):386–393. doi: 10.1007/BF00276536. [DOI] [PubMed] [Google Scholar]
  25. Lemire B. D., Robinson J. J., Weiner J. H. Identification of membrane anchor polypeptides of Escherichia coli fumarate reductase. J Bacteriol. 1982 Dec;152(3):1126–1131. doi: 10.1128/jb.152.3.1126-1131.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Lemire B. D., Weiner J. H. Fumarate reductase of Escherichia coli. Methods Enzymol. 1986;126:377–386. doi: 10.1016/s0076-6879(86)26038-3. [DOI] [PubMed] [Google Scholar]
  27. Messing J., Vieira J. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments. Gene. 1982 Oct;19(3):269–276. doi: 10.1016/0378-1119(82)90016-6. [DOI] [PubMed] [Google Scholar]
  28. Morningstar J. E., Johnson M. K., Cecchini G., Ackrell B. A., Kearney E. B. The high potential iron-sulfur center in Escherichia coli fumarate reductase is a three-iron cluster. J Biol Chem. 1985 Nov 5;260(25):13631–13638. [PubMed] [Google Scholar]
  29. Phillips M. K., Hederstedt L., Hasnain S., Rutberg L., Guest J. R. Nucleotide sequence encoding the flavoprotein and iron-sulfur protein subunits of the Bacillus subtilis PY79 succinate dehydrogenase complex. J Bacteriol. 1987 Feb;169(2):864–873. doi: 10.1128/jb.169.2.864-873.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Simpkin D., Ingledew W. J. The membrane-bound fumarate reductase of Escherichia coli: an electron-paramagnetic-resonance study. Biochem Soc Trans. 1985 Jun;13(3):603–607. doi: 10.1042/bst0130603. [DOI] [PubMed] [Google Scholar]
  32. Weiner J. H., Cammack R., Cole S. T., Condon C., Honoré N., Lemire B. D., Shaw G. A mutant of Escherichia coli fumarate reductase decoupled from electron transport. Proc Natl Acad Sci U S A. 1986 Apr;83(7):2056–2060. doi: 10.1073/pnas.83.7.2056. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Weiner J. H., Dickie P. Fumarate reductase of Escherichia coli. Elucidation of the covalent-flavin component. J Biol Chem. 1979 Sep 10;254(17):8590–8593. [PubMed] [Google Scholar]

Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences

RESOURCES