Abstract
Medial entorhinal cortex (MEC) grid cells fire at regular spatial intervals and project to the hippocampus, where place cells are active in spatially restricted locations. One feature of the grid population is the increase in grid spatial scale along the dorsal-ventral MEC axis. However, the difficulty in perturbing grid scale without impacting the properties of other functionally-defined MEC cell types has obscured how grid scale influences hippocampal coding and spatial memory. Here, we use a targeted viral approach to knock out HCN1 channels selectively in MEC, causing grid scale to expand while leaving other MEC spatial and velocity signals intact. Grid scale expansion resulted in place scale expansion in fields located far from environmental boundaries, reduced long-term place field stability and impaired spatial learning. These observations, combined with simulations of a grid-to-place cell model and position decoding of place cells, illuminate how grid scale impacts place coding and spatial memory.
Proposed to serve as a neural metric for self-localization, grid cells in medial entorhinal cortex (MEC) fire in periodic patterns to form hexagonal arrays that tile the environment1. Grid scale, the spacing between the grid vertices and the size of grid fields, increases along the dorsal-ventral MEC axis1. Computational work2–6 has proposed that this diversity in grid scale provides a spatial input capable of generating hippocampal place cells, which fire in spatially restricted locations7. However, while grid cells project to the hippocampus8, the examination of place cells in the absence of grid cells has produced mixed results. Temporally-restricted MEC inactivation induced place cell re-mapping9, 10 and larger interventions, such as MEC lesions, resulted in place field expansion11, 12. However, these manipulations eliminated, in addition to grid cells, other functionally-defined MEC neurons, such as border cells that encode environmental boundaries and head direction cells that fire when an animal faces a particular direction13, 14. More selective manipulations of grid cells have revealed they are not necessary for the formation of place cells. For example, the loss of grid periodicity after medial septal inactivation does not disrupt place cell firing and developmental work demonstrated that place cells have stable fields before the emergence of grid cell firing patterns15–18.
Importantly, previous studies that examined the impact of grid cells on place coding involved a total loss of grid cells9–11, 17, 19, degradation of the grid structure15, 16, 20, or manipulation of multiple functionally defined cell-types21. This could obscure how grid cells normally effect place cells when their periodicity is intact. Place cells likely receive inputs uniformly distributed across space, with non-linear amplification of certain inputs driving field formation22, 23. Removal versus modification of an input could have different effects, with each manipulation revealing principles for how inputs drive place cells. Thus, while grid cells are not necessary for place cells to form coherent and stable fields15, 16, this does not negate the idea that grid cells play an important role in controlling place cells when present and spatially stable.
Yet, selectively perturbing a specific grid cell feature, such as spatial scale, remains challenging. Grid cells are anatomically intermingled with multiple functionally-defined cell types13, 14, 24 and genetic markers tightly corresponding to specific MEC cell classes are lacking25, 26. These issues have not only made it difficult to study how grid scale impacts the place code but have left the role of grid scale in spatial navigation and memory unresolved. Theoretical and computational work suggest that the representation of space at multiple scales allows the grid population to provide a map of space that is simultaneously high in spatial resolution and large in its spatial range, features which could have implications for how different grid scales support behavior27, 28. To experimentally test the impact of grid scale on place cell coding and behavior we took advantage of the expansion in grid scale observed after the loss of HCN1 channels29, 30, which leaves grid periodicity and other functionally-defined MEC neurons intact. While previous work deleted HCN1 across the forebrain29–31, we used a viral approach to knockout HCN1 in the MEC of adult mice, allowing us to examine how grid scale controls place codes, navigation and memory.
Results
Selective knockout of MEC HCN1 channels
Previous work demonstrated that germline knockout of forebrain HCN1 channels increased both grid and place scale30, 31. To selectively examine how grid scale impacts place coding and behavior, we regulated HCN1 channel expression specifically in the MEC by injecting Cre-expressing AAV (AAV-DJ CMV cre-GFP) into the MEC of adult floxed HCN1 knockout mice (iCre-KO) and their wildtype littermates (iWT) (Fig. 1a). GFP was well constricted to and detected in a large portion of MEC (Fig. 1b–c, Online Methods and Supplementary Figs. 1–4). Whole-cell patch clamp recordings confirmed that the Cre-mediated knockout of HCN1 reduced I(h) (Supplementary Fig. 5).
Loss of MEC HCN1 channels selectively impacts grid scale
To investigate if the loss of MEC HCN1 in adult mice specifically impacted grid scale, we implanted tetrodes into 29 mice (12 iWT; 17 iCre-KO) and recorded cells in MEC (iWT n = 527; iCre-KO n = 600) as mice explored open arenas. We considered MEC coding properties in two ways. First, we identified grid, border, spatially-stable, head direction and speed cells by performing a shuffling analysis (Online Methods) (Supplementary Fig. 6). Using this approach, we found 37 iWT and 62 iCre-KO grid cells (Fig. 1d). While the magnitude of periodicity, mean firing rate (FR) and spatial stability of grid cells did not differ between groups, both grid spacing and field size were significantly expanded in iCre-KO compared to iWT mice (mean ± SD; spacing: iWT = 36.26 ± 9.27 cm, iCre-KO = 42.16 ± 10.53 cm, Z = −3.09, p = 0.0020; field size: iWT = 489.29 ± 301.62 cm2, iCre-KO = 502.64 ± 207.26 cm2, Z = −2.20, p = 0.028, two-tailed Wilcoxon rank sum [WRS] tests) (Fig. 1d–f). This difference in scale did not reflect different dorsal-ventral (DV) recording locations between the two groups (Supplementary Fig. 7). We did not detect any significant changes in the coding properties of other functionally-defined MEC cell types, including: border cells, spatially stable cells not classified as grid or border cells, putative interneurons (mean FR > 10 Hz)24, head direction cells and speed cells (Table 1, Supplementary Fig. 8–9).
Table 1.
iWT | iCre-KO | ||
---|---|---|---|
|
|||
border cells | |||
n | 86 | 71 | |
border score | 0.62 ± 0.092 | 0.61 ± 0.080 | WRS Z = −0.20, p = 0.84 |
mean firing rate | 1.13 ± 2.50 Hz | 1.01 ± 1.73 Hz | WRS Z = 0.34, p = 0.73 |
peak firing rate | 3.69 ± 5.09 Hz | 3.53 ± 5.00 Hz | WRS Z = 0.22, p = 0.83 |
spatial stability | 0.31 ± 0.22 | 0.27 ± 0.22 | WRS Z = 0.87, p = 0.38 |
border width | 14.43 ± 6.53 cm | 14.23 ± 5.22 cm | WRS Z =−0.30, p = 0.76 |
spatially stable cells | |||
n | 32 | 38 | |
mean firing rate | 1.15 ± 1.11 Hz | 1.99 ± 2.21 Hz | WRS Z = −1.20, p = 0.23 |
peak firing rate | 5.00 ± 4.37 Hz | 6.15 ± 1.00 Hz | WRS Z = −1.73, p = 0.084 |
spatial stability | 0.37 ± 0.15 | 0.37 ± 0.17 | WRS Z = 0.19, p = 0.85 |
mean field size | 2473.45 ± 2233.2 cm2 | 2692.29 ± 2768.8 cm2 | WRS Z = 0.12, p = 0.90 |
% box covered by fields | 43.24 ± 30.72 % | 45.58 ± 31.62 % | WRS Z = −0.15, p = 0.88 |
interneurons | |||
n | 15 | 22 | |
mean firing rate | 23.33 ± 26.46 Hz | 23.37 ± 16.11 Hz | WRS Z = −1.38, p = 0.17 |
peak firing rate | 37.22 ± 36.48 Hz | 38.85 ± 19.89 Hz | WRS Z = −1.50, p = 0.13 |
bursting | 19.33 ± 14.55 % | 21.50 ± 16.20 % | WRS Z = 0, p > 0.99 |
theta-modulated interneurons, n | 13 | 16 | |
interspike interval | 96.92 ± 14.65 s | 98.75 ± 16.07 s | WRS Z = −0.36, p = 0.72 |
head direction cells | |||
layer II/III, n | 176 | 185 | |
head direction score | 0.36 ± 0.21 | 0.37 ± 0.20 | WRS Z = −1.32, p = 0.19 |
mean firing rate | 1.24 ± 7.62 Hz | 0.72 ± 1.22 Hz | WRS Z = 0.15, p = 0.88 |
peak firing rate | 3.66 ± 11.37 Hz | 2.98 ± 3.81 Hz | WRS Z = −0.50, p = 0.62 |
directional stability | 0.46 ± 0.29 | 0.46 ± 0.29 | WRS Z = −0.18, p = 0.86 |
tuning width | 124.77 ± 72.86° | 128.43 ± 81.51° | WRS Z = 0.0071, p = 0.99 |
layer V, n | 49 | 55 | |
head direction score | 0.41 ± 0.26 | 0.40 ± 0.20 | WRS Z = −0.64, p = 0.52 |
mean firing rate | 0.54 ± 0.75 Hz | 0.84 ± 1.70 Hz | WRS Z = −0.036, p = 0.97 |
peak firing rate | 2.08 ± 2.34 Hz | 3.00 ± 4.49 Hz | WRS Z = −0.35, p = 0.73 |
directional stability | 0.55 ± 0.27 | 0.52 ± 0.20 | WRS Z = 0.83, p = 0.41 |
tuning width | 126.61 ± 80.08° | 126.55 ± 78.98° | WRS Z = −0.42, p = 0.67 |
speed cells | |||
n | 69 | 89 | |
speed score | 0.11 ± 0.056 | 0.11 ± 0.055 | WRS Z = −0.074, p = 0.94 |
mean firing rate | 3.39 ± 12.41 Hz | 3.088 ± 9.72 Hz | WRS Z = 0.11, p = 0.92 |
peak firing rate | 6.89 ± 18.39 Hz | 6.40 ± 13.12 Hz | WRS Z = −0.50, p = 0.61 |
slope (hz/cm/s) | 0.018 ± 0.025 | 0.024 ± 0.047 | WRS Z = −0.070, p = 0.94 |
MEC EEG (layer II) | |||
n | 12 | 16 | |
theta power | 0.75 ± 0.34 | 0.80 ± 0.47 | WRS Z = 0, p > 0.99 |
theta frequency | 8.82 ± 0.22 Hz | 8.79 ± 0.25 Hz | WRS Z = 0.35, p = 0.73 |
theta slope (Hz/cm/s) | 0.011 ± 0.0067 | 0.014 ± 0.0081 | WRS Z = −1.27, p = 0.20 |
fast gamma power | 0.092 ± 0.024 | 0.092 ± 0.039 | WRS Z = 0.023, p = 0.98 |
slow gamma power | 0.27 ± 0.068 | 0.23 ± 0.085 | WRS Z = 1.18, p = 0.24 |
hippocampal EEG | |||
n | 11 | 8 | *p-value using exact method |
theta power | 0.89 ± 0.40 | 0.85 ± 0.32 | WRS, p > 0.99 |
theta frequency | 8.74 ± 0.29 Hz | 8.77 ± 0.12 Hz | WRS, p = 0.86 |
theta slope (Hz/cm/s) | 0.016 ± 0.01 | 0.015 ± 0.0053 | WRS, p = 0.90 |
fast gamma power | 0.082 ± 0.049 | 0.087 ± 0.026 | WRS, p = 0.60 |
slow gamma power | 0.25 ± 0.097 | 0.32 ± 0.066 | WRS, p = 0.091 |
place cells | |||
n | 113 | 126 | |
number of fields | 1.95 ± 1.16 | 1.71 ± 1.09 | WRS Z = 1.66, p = 0.10 |
peak firing rate | 3.50 ± 2.55 Hz | 4.38 ± 4.32 Hz | WRS Z = −1.30, p = 0.19 |
mean in-field firing rate | 1.41 ± 1.02 Hz | 1.84 ± 1.98 Hz | WRS Z = −1.09, p = 0.27 |
bursting | 4.76 ± 6.40 %, | 5.52 ± 4.29 % | WRS Z = −1.00, p = 0.32 |
Mean ± SD. Cells are used as experimental units except for EEG measures, where mice are used. All WRS tests were two tailed.
Second, we used a general statistical approach to capture the coding properties of MEC neurons32. We fit multiple, nested linear-nonlinear-Poisson (LN) models to the spike train of each cell, enabling us to quantify how well the position (P), head direction (H) or running speed (S) of the animal predicted single cell spiking activity (Figure 1g–k, Supplementary Fig. 10, Online Methods). This model-based approach does not classify neurons based on specific pre-defined firing rate patterns and thus, captures coding in a significantly larger proportion of MEC neurons than shuffling analyses (# classified cells: shuffled = 879/1127, LN model = 1025/1127, Z = −8.49, p ≪ 0.0001, 1-sided Binomial test). Using the LN model approach, we found equal proportions of MEC neurons encoding P, H, or S in iWT and iCre-KO mice (Supplementary Fig. 10). For cells that significantly encoded P, H or S, there was no significant difference between groups in the mutual information between the navigation variable and neural spikes (Fig. 1g). As MEC contains a large number of cells that encode the spatial location of the animal but do not show grid or border firing patterns32, 33, we then considered cells that significantly encoded P but were not classified as grid or border cells. We found no significant differences in multiple coding features of this population of P-encoding cells, consistent with our analyses of spatially modulated cells identified using shuffling (Fig. 1h). Finally, given the reported heterogeneity in how MEC neurons encode speed32, we examined cells S-encoding cells, many of which were not detected by our shuffling analysis. These included, for example, speed cells that had a negative or non-monotonic firing rate relationship with running speed (Supplementary Fig. 10). We found no significant differences in the speed modulation of speed cells or the degree of curvature in their firing rate profiles (Fig. 1i–k). This result held for grid cells that significantly encoded S (Fig. 1k). Combined, these findings are consistent with our analyses using the shuffling approach to classify cell-types.
Finally, we examined if MEC HCN1 deletion impacted MEC or hippocampal temporal signals (Table 1, Supplementary Fig. 9). Theta power, frequency, and the running speed modulation of theta, as well as slow and fast gamma power, were all comparable between iCre-KO and iWT mice (all p > 0.05). Taken together, these data indicate that the impact of HCN1 on MEC coding properties is highly specific to grid scale, pointing to this experimental model as an ideal entry point for the investigation of how grid scale impacts place coding and behavior.
Place and grid cell scale expansion occur in concert
We next asked how an increase in grid scale influenced spatial coding in dorsal hippocampus8. We recorded CA1 place cells in iWT (n = 11) and iCre-KO mice (n = 8) as they explored open arenas (Fig. 2a, Supplementary Fig. 2). Place field size was significantly larger in iCre-KO compared to iWT mice (Fig. 2b–c, Supplementary Fig. 11–12). Consistent with this, the percentage of the environment covered by firing fields and the mean firing rate (FR) across the environment were higher in iCre-KO place cells (Fig. 2d–e). This FR difference reflected the increased place field size in iCre-KO mice rather than increased firing outside of fields, as the spatial selectivity index was not significantly different between groups (mean ± SD; iWT = 1.08 ± 0.26, iCre-KO = 1.06 ± 0.27, Z = 0.53, p = 0.60, two-tailed WRS). In addition, in a separate group of iWT and iCre-KO mice trained to run on a linear track, analysis of individual passes through place fields demonstrated that the expansion in field size represented a true scale expansion, rather than place fields slowly drifting over the course of the session (Supplementary Fig. 11–12).
Despite the increased place scale, other spiking features of place cells were similar between groups (Table 1). In addition, the temporal dynamics of place cell phase precession remained intact in iCre-KO mice, consistent with previous work demonstrating both that MEC is necessary for hippocampal phase precession34 and that the loss of forebrain HCN1 did not impact MEC theta phase precession29 (Supplementary Fig. 11).
Developmental and pharmacological approaches have suggested that grid cells predominately influence place cells with fields located far from environmental boundaries15, 20, 35. To examine this idea, we quantified place field size as a function of the field’s distance from the boundaries of the arena. In both iWT and iCre-KO mice, place field size was positively correlated with distance from the nearest boundary (Fig. 2f). However, the slope of this correlation was significantly steeper in iCre-KO mice, suggesting that the increase in grid scale primarily effected the size of place fields located far from boundaries. To further investigate this, we compared the size of place fields located near the center versus the boundaries of the arena. The difference in field size between these locations was more pronounced for iCre-KO compared to iWT mice (Fig. 2g). Taken together these data indicate that, when present, grid scale is an important determinant of place scale, with the strength of this influence likely dependent on the location of place fields relative to environmental landmarks.
Grid scale expansion impacts long-term place stability
While the scale of the place code could impact how accurately an animal can decode its current position, the long-term maintenance of place field stability across multiple exposures to the same environment has been proposed as a vital element of the spatial memory system. MEC input likely plays a role in the maintenance of the place map, as inactivation of MEC induces a near instantaneous change in the configuration of place fields, a phenomenon referred to as remapping9, 10, 34. However, which features of entorhinal coding drive place stability versus remapping, as well as what impact place cell stability might have on memory, remain unresolved.
To address the role of grid scale in place cell stability, we compared the stability of iWT and iCre-KO place cells within a single session and across days within the same spatial context (Fig. 3a and Supplementary Fig. 13, 14). While stability did not differ across a single session (mean ± SD; Pearson’s correlation coefficient: iWT = 0.56 ± 0.23, iCre-KO = 0.60 ± 0.23, Z = −1.24, p = 0.21, two-tailed WRS), place cell stability across 24 hours was significantly lower in iCre-KO compared to iWT place cells (Fig. 3b). Suggesting that this decrease in iCre-KO long-term place stability reflected remapping, rather than degeneration, spatial information content remained similar across days (iWT Z = 0.013, p = 0.99; iCre-KO Z = 0.64, p = 0.52, two-tailed Wilcoxon signed-rank tests).
We then examined the degree to which place cells remapped across days in iWT and iCre-KO mice, which can consist of a change in firing rate or a shift in the location of a place field36, 37. While changes in firing rate across days were similar between iWT and iCre-KO (mean ± SD; rate difference index iWT = 0.37 ± 0.26, iCre-KO = 0.36 ± 0.39, Z = −0.42, p = 0.68, two-tailed WRS), iCre-KO place fields shifted across days to a larger degree than iWT place fields, with 80% of iWT place cells shifting less than 8 cm across days (median shift iWT = 2.50 cm, iCre-KO = 14.58 cm, Z = −3.27, p = 0.0011, two-tailed WRS) (Fig. 3c). This suggests that shifts in place field location drove the reduction in iCre-KO across-day stability values, an idea supported by the correlation between shift-magnitudes and across-day correlation coefficients in both groups (Fig. 3d). Cells that were simultaneously recorded shifted independently of one another (Supplementary Fig. 14d), consistent with previous place cell remapping work37, 38. The distributions of across-day correlation coefficients for iWT and iCre-KO mice were significantly greater than shuffled distributions (Fig. 3b), indicating that place maps across days were not completely independent. However, significantly fewer place cells remained stable across days in iCre-KO compared to iWT mice (place cells with an across-day correlation coefficient > 95th percentile of the shuffled distribution: iWT = 17/25 [68%], iCre-KO = 11/36 [31%], Z = 2.89, p = 0.0039, two-tailed binomial test). Taken together, these data indicate that larger grid scales increase the propensity of place cells to remap across days, and that this remapping reflects changes in place field location.
Winner-take-all dynamics, grid scale and remapping
How does grid scale influence the propensity of place cells to remap even when spatial context remains the same across days? Computational and experimental works have suggested that place cell remapping can be induced by rotation or phase shift in the grid pattern, or a change in grid firing rate3, 21, 39. However, we found that grid cells remained spatially stable across days in iWT and iCre-KO mice (Supplementary Fig. 14). To better understand how grid scale influences long-term place stability we next implemented a computational model of place cell formation, where place fields are formed via a winner-take-all competition40. In the model, place cells received two types of input: modular grid cell inputs and “unstable spatial” inputs. Grid cell inputs remained constant across two consecutive simulations (i.e. days). The activity of unstable spatial inputs was represented by Gaussian fields and were re-drawn from one simulation to the next, representing the long-term spatial instability of some place cell inputs41, 42. Competitive inhibition between place cells limited the number of cells active at any given location of the environment. Although the exact number of grid inputs received by place cells is unknown, studies suggest a range up to ~100043. To explore values near this range, we varied the number of grid and unstable spatial inputs, as well as the ratio between each input type, across different iterations of this model (i.e. “conditions”).
To test the impact of increased grid scale on place cell remapping we ran simulations over which we varied the spacing of the smallest grid module, which set the spacing for all successive modules (Fig. 4a). The model recapitulated our experimental findings. First, increasing the scale of grid inputs increased the size of place fields (Supplementary Fig. 15). Second, the simulations revealed a reduction in the Pearson’s correlation of place maps across days as the scale of the grid inputs increased. This result was robust and independent of the exact parameters used in the model: reduced stability with increased grid scale was observed across all conditions tested, in which we varied the number of grid and unstable spatial inputs (Fig. 4b–d) or the size of the unstable spatial inputs (Supplementary Fig. 15).
How does grid scale control place cell stability in the presence of winner-take-all dynamics? We hypothesized that linear combinations of smaller-scaled grid cells result in an input pattern that has large peak values in specific spatial locations. This type of input then forms place fields resistant to changes in lower-amplitude unstable spatial inputs, allowing them to remain stable across simulations. We found several features in our simulation consistent with this hypothesis. First, the effect of grid scale on place cell remapping strengthened as the ratio of grid to unstable spatial inputs increased (Fig. 4e). Second, we examined the activity maps resulting from grid inputs, which represent the strength of the grid cell input to a single place cell at any given point in physical space (Fig. 4a). We found that the peak value for this grid input declined with increased grid spacing, as the likelihood of grid fields spatially coinciding decreased (Fig. 4f and Supplementary Fig. 15). Further, we found a significant relationship between the peak value of the grid input and the correlation coefficient of place maps across days (Fig. 4g). Finally, the correlation between the activity map for grid inputs and the resulting place map became less coupled as the scale of grid inputs increased, suggesting that grid input had less influence on the resulting place field location as grid scale increased (Fig. 4h). Together, these observations suggest that the activity profile of grid input across the environment changes with scale, impacting the degree to which grid inputs determine the location of the place field. Place cells receiving smaller-scale grid input may be driven strongly by grid inputs, whereas those receiving larger-scale grid inputs may be more heavily influenced by unstable spatial inputs that change over time.
Decoding accuracy after changes in place scale and stability
Given our experimental findings, we next asked how place scale versus long-term stability impact an animal’s ability to estimate its current position. Using a maximum-likelihood decoding framework, we computed the accuracy of decoders trained on simulated iWT and iCre-KO place cell datasets (Fig. 5a). These simulated data sets allowed us to examine how features of the place code impact position decoding assuming more realistic numbers of active place cells, which is higher than what our data captured. First, we matched simulated field sizes for iWT and iCre-KO datasets to the experimentally observed distributions. For small populations of place cells (less than ~100), the iCre-KO model outperformed the iWT model, as the larger scaled iCre-KO place cells covered more of the environment. However, the difference in error between models decreased with cell number (5000 shuffles, p = 6.0e–4) (Fig. 5b–c) and at more realistic place cell numbers (1000 neurons), decoding from iWT cells was only slightly better (< 1 cm difference) than from iCre-KO cells (Fig. 5c). These results suggest that the increased size of iCre-KO place fields is unlikely to impair the resolution of encoded position to a degree that is behaviorally relevant, consistent with theoretical work showing that in 2-dimensions (for 2-dimensional variables), the width of tuning curves does not affect the amount of information conveyed once there is coverage of the whole space44.
Next, to explore how the reduced long-term stability of iCre-KO place cells impacts decoding accuracy, the decoder was trained on datasets simulating iWT and iCre-KO place maps, but performance was assessed on a second day in which the field locations of each cell were shifted by values we observed experimentally. The iCre-KO model exhibited reduced decoding accuracy compared to the iWT model across the entire range of simulations, with the absolute difference increasing with cell number (5000 shuffles, p = 0.031) until reaching ~4 cm at 1000 cells (Fig. 5d–e). Together, these results suggest that the instability, rather than the size, of iCre-KO place cells would have a larger impact on the accuracy of position coding.
Impaired rapid place learning in iCre-KO mice
Finally, to examine how impaired position decoding impacts behavior, we examined animals’ performance on the delayed-match-to-place (DMP) task, a hippocampal-dependent water maze variant that demands a flexible knowledge of the environment (Fig. 6, Supplementary Fig. 3)45. The task assesses the ability of rodents to rapidly learn the position of a hidden platform, whose location changes each day, within the context of a familiar environment. DMP testing began after five days of training, in which mice learned to swim to a hidden platform whose location remained constant. Suggesting that iCre-KO mice can accurately navigate to a fixed goal location, there were no differences in performance between the two groups on the training task (Fig. 6a–b and Supplementary Fig. 3) and both groups retained long-term memory for the goal location on a probe test administered 24 hours after the last training session (Fig. 6c).
For the DMP task, the platform was moved to a new location each day, and the average performance on each of the four daily trials averaged across seven days of testing. The performance of iWT and iCre-KO mice was similar on the first trial of each day (t(19) = 0.15, p = 0.88, two-tailed t-test). However, the rate of learning across trials significantly differed between the groups. The distance traveled by iWT mice to locate the platform decreased over the four trials, whereas iCre-KO mice did not show significant improvement across trials (Fig. 6d–f, Supplementary Fig. 3). Consistent with this finding, the average ‘savings’ (reduction in path length between trials 1–2 and 3–4) was significantly greater in iWT compared to iCre-KO mice (Fig. 6g, Supplementary Fig. 3). The improved performance of iWT mice in later trials was also reflected in their search strategies: compared to iCre-KO mice, iWT mice became increasingly focused on the area surrounding the platform location (Fig. 6h–i).
Deficits in rapid place learning in iCre-KO mice were not attributable to an overall difference in velocity or thigmotaxis (Fig. 6j–k). In addition, iCre-KO mice did not display visual, sensorimotor, or motivational impairments, performing comparably to iWTs on a cued version of the DMP task (Fig. 6l and Supplementary Fig. 3). Deficits did not reflect increased perseveration for the previous day’s platform location or the training platform location (visits to training platform iCre-KO, t(19) = 0.24, p = 0.81; visits to previous day’s platform, t(19) = 0.78, p = 0.45; two-tailed t-tests). Taken together with the intact performance on the training task (Fig. 6a), this suggests that iCre-KO mice can learn the general structure of the DMP task (e.g. that the environment contains a hidden platform and that finding this platform terminates the trial). However, unlike the training task, the DMP task requires that the mouse distinguish the current platform position (recent memory) from previous platform positions (remote memory). While precisely how place code stability supports recent versus remote memories remains incompletely understood, decreased long-term place stability may result in interference between encoding of the current platform location and recall of remote spatial information regarding the environment or previous platforms.
Alternatively, it is possible that the iCre-KO manipulation impacted working memory. However, we found no difference in the performance of these same iWT and iCre-KO mice on a spontaneous Y maze alternation task (Supplementary Fig. 3). Thus, as a combined set of results, these data raise the possibility that increasing grid scale leads to decreased place stability, which in turn impacts the ability of mice to encode changing spatial goal locations within a single spatial context.
Discussion
While theoretical and computational works have proposed that grid scale impacts hippocampal coding and behavior2–5, 27, 28, the difficulty in selectively perturbing specific grid cell features has left these ideas experimentally untested. Here, we used a viral approach to knock out HCN1 channels in the MEC of adult mice, which increased grid scale but left the coding features of spatial, velocity and temporal MEC signals intact. In iCre-KO mice, the increase in grid scale expanded CA1 place scale and decreased long-term place stability. Simulations of large place cell populations, revealed that the experimentally observed decrease in iCre-KO long-term place stability led to larger decoding errors when estimating the animal’s position across days. The behavioral impact of this reduction in decoding accuracy became apparent in a task requiring mice to flexibly navigate to a goal location that moved each day. Combined, our data and simulations point to grid scale as a determinant of place scale and long-term stability, features that likely support an animal’s ability to rapidly learn multiple goal locations within a single spatial context.
These findings have implications for computational models that generate place cells. First, previous work that examined place cells in the absence of grid cells indicated that grid cells did not impact the formation or maintenance of place fields15, 16, a finding inconsistent with models that use linear summation of grid cell input to drive place field formation2, 5, 6. At the same time, our data support the idea that, when present, grid scale is a significant feature of entorhinal input that is capable of shaping the place code. Our findings taken together with previous reports9, 15, 16 thus support models in which place cells receive inputs distributed across space, with spatial selectivity arising from the potentiation of subsets of these inputs22 or local hippocampal circuit computation40. In such a model, grid cells could influence the formation of place fields when present but have little impact on this process when absent. Moreover, the idea that place cell spatial selectivity reflects input-potentiating mechanisms is consistent with the expansion of place size we observed after grid scale expansion. Recent data points to coincidental activity between MEC and CA3 as a mechanism for generating large regenerative events in CA1 neurons called plateau potentials, with the prevalence of such events capable of creating place fields22. Inputs from grid cells with larger fields could thus interact with intrinsic hippocampal dynamics to cause an increase in the probability or duration of CA1 plateau potentials, leading to larger place fields, an idea future experiments could address.
The importance of local hippocampal dynamics in determining place field spatial selectivity is also reflected in our simulations of a winner-take-all model40. These simulations demonstrate how, in the context of a competitive hippocampal network, place cells that receive inputs from larger grid scales are more prone to remap in response to changes in unstable spatial inputs. The mechanism underlying this observation likely lies in the fact that inputs from large grid scales are less likely to overlap in a way that would create a strong spatial signal, allowing other inputs to dominate the location of the place field. This relationship however, likely depends on the degree of plasticity associated with various inputs, as previous manipulations that expanded grid scale and enhanced hippocampal plasticity at synapses receiving MEC input resulted in increased long-term place stability30, 31, 46. Even so, as grid spacing in ventral MEC is at least five times wider than spacing in dorsal MEC47 and a general dorsal to ventral topography exists in the projections from MEC to CA148, our simulations thus predict that, in the normal animal, ventral place cells should show more remapping than dorsal place cells when non-spatial cues change. This idea is consistent with experimental work demonstrating more remapping in ventral place cells after non-spatial manipulations, such as a change to the olfactory context49. Although we do not specify what anatomical sources might provide this unstable-spatial input, likely sources include the lateral entorhinal cortex, which encodes non-spatial contextual features41 or the hippocampal CA2 region, where neurons gradually change their coding features to reflect the passage of hours to days42. Our model predicts that elimination of these inputs would increase the stability of place maps, an idea future work could explore.
The decrease in long-term place stability we observed in iCre-KO mice had a clear behavioral impact when mice were required to encode novel goal locations within a single spatial context. Our data indicates a large subset of place cells in wildtype mice remain stable over days. However, the proportion of place cells that retained stable fields across days significantly decreased in iCre-KO mice. This decrease in long-term place stability could lead to errors when the mouse must integrate its current position and the location of a new goal within a familiar spatial context. As place maps in iCre-KO mice change substantially from day to day, one possibility is that the map used to decode the animal’s current position did not match the map used to form a representation of the spatial context, or the map used to encode the location of the new goal. This mismatch between maps as a possible mechanism underlying the poor performance of iCre-KO mice on the DMP task is consistent with two other findings of the present study. First, it is consistent with our simulations of place cell networks, which demonstrates that the degree of iCre-KO place instability leads to significantly larger decoding errors across days in iCre-KO compared to iWT mice. Second, it is consistent with the fact that iCre-KO mice can navigate as well as iWT mice when the goal location can be located based on a visual cue, a strategy that likely supported their accurate behavior on the training task with a fixed goal location and on the cued version of the DMP task.
Together, our data reconciles studies describing varied effects of grid cell manipulations on place cells. Previously, the most selective manipulations of the grid network were achieved by inactivating the medial septum and thus triggering a loss of grid periodicity while preserving other MEC signals, causing a transient expansion in grid scale by introducing an animal to a novel environment, or lesioning MEC. First, with medial septal inactivation, the size of the environment appeared to determine the degree to which the loss of grid cells impacted place coding. When boundary information was readily available, for example in a small arena, the loss of grid cell periodicity did not impact the maintenance or formation of place fields15, 20. In larger open arenas however, place cells in the absence of grid periodicity did not form fields in the center of the box, where boundary information was less apparent20. Second, grid and place scale transiently expanded in novel environments and then contracted in concert as the environment becomes more familiar50. Combined, these findings are complementary to our work demonstrating grid cells play a stronger role in controlling place scale in conditions where input from border cells is weaker. In addition, our results of increased place scale and decreased place stability after grid scale expansion most closely mirror spatial changes in the place code observed after complete MEC lesions34. Taken together, these studies highlight a critical contribution for MEC spatial codes to the hippocampal place code. We take these findings further however, by both experimentally and computationally demonstrating how grid scale uniquely impacts long-term place stability and the ability to encode multiple spatial locations within a single spatial context.
Supplementary Material
Acknowledgments
LMG is a New York Stem Cell Foundation – Robertson Investigator. This work was supported by funding from The New York Stem Cell Foundation, Whitehall Foundation, NIMH MH106475, the Simons Foundation, James S McDonnell Foundation and a Klingenstein-Simons Fellowship awarded to LMG and an NSF Graduate Research Fellowship awarded to CSM. We thank J Dickinson, AS Henderson, K Muench, NL Saw and L Willmore for assistance in gathering behavioral data, and A Borrayo and AS Henderson for histology assistance.
Footnotes
Author Contributions: LMG and CSM conceptualized experiments and analyses. CSM collected and analyzed in vivo data, JSB collected and analyzed in vitro data. KH performed the decoding and winner-take-all simulations and analyses, and provided programming support. LMG and CSM wrote the paper with feedback from all authors.
Data and code availability
All data are available from authors upon request. Code to run the Winner-Take-All model is available at https://github.com/GiocomoLab
Competing Financial Interests:
The authors declare no competing financial interests.
References
- 1.Hafting T, Fyhn M, Molden S, Moser MB, Moser EI. Microstructure of a spatial map in the entorhinal cortex. Nature. 2005;436:801–806. doi: 10.1038/nature03721. [DOI] [PubMed] [Google Scholar]
- 2.Solstad T, Moser EI, Einevoll GT. From grid cells to place cells: A mathematical model. Hippocampus. 2006;16:1026–1031. doi: 10.1002/hipo.20244. [DOI] [PubMed] [Google Scholar]
- 3.Monaco JD, Abbott LF. Modular realignment of entorhinal grid cell activity as a basis for hippocampal remapping. J Neurosci. 2011;31:9414–9425. doi: 10.1523/JNEUROSCI.1433-11.2011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Cheng S, Frank LM. The structure of networks that produce the transformation from grid cells to place cells. Neuroscience. 2011;197:293–306. doi: 10.1016/j.neuroscience.2011.09.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Fuhs MC, Touretzky DS. A spin glass model of path integration in rat medial entorhinal cortex. J Neurosci. 2006;26:4266–4276. doi: 10.1523/JNEUROSCI.4353-05.2006. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.McNaughton BL, Battaglia FP, Jensen O, Moser EI, Moser MB. Path integration and the neural basis of the ‘cognitive map’. Nat Rev Neurosci. 2006;7:663–678. doi: 10.1038/nrn1932. [DOI] [PubMed] [Google Scholar]
- 7.O’Keefe J, Dostrovsky J. The hippocampus as a spatial map. Preliminary evidence from unit activity in the freely-moving rat. Brain Res. 1971;34:171–175. doi: 10.1016/0006-8993(71)90358-1. [DOI] [PubMed] [Google Scholar]
- 8.Zhang SJ, et al. Optogenetic dissection of entorhinal-hippocampal functional connectivity. Science. 2013;340:1232627. doi: 10.1126/science.1232627. [DOI] [PubMed] [Google Scholar]
- 9.Miao C, et al. Hippocampal remapping after partial inactivation of the medial entorhinal cortex. Neuron. 2015;88:590–603. doi: 10.1016/j.neuron.2015.09.051. [DOI] [PubMed] [Google Scholar]
- 10.Rueckemann JW, et al. Transient optogenetic inactivation of the medial entorhinal cortex biases the active population of hippocampal neurons. Hippocampus. 2015 Aug 24; doi: 10.1002/hipo.22519. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Ormond J, McNaughton BL. Place field expansion after focal MEC inactivations is consistent with loss of Fourier components and path integrator gain reduction. Proc Natl Acad Sci U S A. 2015;112:4116–4121. doi: 10.1073/pnas.1421963112. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Brun VH, et al. Impaired spatial representation in CA1 after lesion of direct input from entorhinal cortex. Neuron. 2008;57:290–302. doi: 10.1016/j.neuron.2007.11.034. [DOI] [PubMed] [Google Scholar]
- 13.Solstad T, Boccara CN, Kropff E, Moser MB, Moser EI. Representation of geometric borders in the entorhinal cortex. Science. 2008;322:1865–1868. doi: 10.1126/science.1166466. [DOI] [PubMed] [Google Scholar]
- 14.Sargolini F, et al. Conjunctive representation of position, direction, and velocity in entorhinal cortex. Science. 2006;312:758–762. doi: 10.1126/science.1125572. [DOI] [PubMed] [Google Scholar]
- 15.Brandon MP, Koenig J, Leutgeb JK, Leutgeb S. New and distinct hippocampal place codes are generated in a new environment during septal inactivation. Neuron. 2014;82:789–796. doi: 10.1016/j.neuron.2014.04.013. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Koenig J, Linder AN, Leutgeb JK, Leutgeb S. The spatial periodicity of grid cells is not sustained during reduced theta oscillations. Science. 2011;332:595–595. doi: 10.1126/science.1201685. [DOI] [PubMed] [Google Scholar]
- 17.Wills TJ, Cacucci F, Burgess N, O’Keefe J. Development of the hippocampal cognitive map in preweanling rats. Science. 2010;328:1573–1576. doi: 10.1126/science.1188224. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Langston RF, et al. Development of the spatial representation system in the rat. Science. 2010;328:1576–1580. doi: 10.1126/science.1188210. [DOI] [PubMed] [Google Scholar]
- 19.Brun VH, et al. Place cells and place recognition maintained by direct entorhinal-hippocampal circuitry. Science. 2002;296:2243–2246. doi: 10.1126/science.1071089. [DOI] [PubMed] [Google Scholar]
- 20.Wang Y, Romani S, Lustig B, Leonardo A, Pastalkova E. Theta sequences are essential for internally generated hippocampal firing fields. Nat Neurosci. 2015;18:282–288. doi: 10.1038/nn.3904. [DOI] [PubMed] [Google Scholar]
- 21.Kanter BR, et al. A novel mechanism for the grid-to-place cell transformation revealed by transgenic depolarization of medial entorhinal cortex layer II. Neuron. 2017;93:1480–1492. doi: 10.1016/j.neuron.2017.03.001. [DOI] [PubMed] [Google Scholar]
- 22.Bittner KC, et al. Conjunctive input processing drives feaure selectivity in hippocampal CA1 neurons. Nat Neurosci. 2015;18:1133–1142. doi: 10.1038/nn.4062. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23.Lee D, Lin BJ, Lee AK. Hippocampal place fields emerge upon single-cell manipulation of excitability during behavior. Science. 2012;337:849–853. doi: 10.1126/science.1221489. [DOI] [PubMed] [Google Scholar]
- 24.Kropff E, Carmichael JE, Moser MB, Moser EI. Speed cells in the medial entorhinal cortex. Nature. 2015;523:419–424. doi: 10.1038/nature14622. [DOI] [PubMed] [Google Scholar]
- 25.Sun C, et al. Distinct speed dependence of entorhinal island and ocean cells, including respective grid cells. Proc Natl Acad Sci U S A. 2015;112:9466–9471. doi: 10.1073/pnas.1511668112. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 26.Tang Q, et al. Pyramidal and stellate cell specificity of grid and border representations in layer 2 of medial entorhinal cortex. Neuron. 2014;84:1191–1197. doi: 10.1016/j.neuron.2014.11.009. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27.Fiete IR, Burak Y, Brookings T. What Grid Cells Convey About Rat Location. J Neurosci. 2008;28:6858–6871. doi: 10.1523/JNEUROSCI.5684-07.2008. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28.Stemmler M, Mathis A, Herz AV. Connecting multiple spatial scales to decode the population activity of grid cells. Sci Adv. 2015;1:e1500816. doi: 10.1126/science.1500816. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Eggink H, Mertens P, Storm I, Giocomo LM. HCN1 independent grid cell phase precession in mice. Hippocampus. 2014;24:249–256. doi: 10.1002/hipo.22231. [DOI] [PubMed] [Google Scholar]
- 30.Giocomo LM, et al. Grid cells use HCN1 channels for spatial scaling. Cell. 2011;147:1159–1170. doi: 10.1016/j.cell.2011.08.051. [DOI] [PubMed] [Google Scholar]
- 31.Hussaini SA, Kempadoo KA, Thuault SJ, Siegelbaum SA, Kandel ER. Increased size and stability of CA1 and CA3 place fields in HCN1 knockout mice. Neuron. 2011;72:643–653. doi: 10.1016/j.neuron.2011.09.007. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Hardcastle K, Maheswaranathan N, Ganguli S, Giocomo LM. A multiplexed, heterogeneous, and adaptive code for navigation in medial entorhinal cortex. Neuron. 2017;94:375–387. doi: 10.1016/j.neuron.2017.03.025. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33.Diehl GW, Hon OJ, Leutgeb S, Leutgeb JK. Grid and nongrid cells in medial entorhinal cortex represent spatial location and environmental features with complementary coding schemes. Neuron. 2017;94:83–92. doi: 10.1016/j.neuron.2017.03.004. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Schlesiger MI, et al. The medial entorhinal cortex is necessary for temproal organization of hippocampal neuronal activity. Nat Neurosci. 2015;18:1123–1132. doi: 10.1038/nn.4056. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Muessig L, Hauser J, Wills TJ, Cacucci F. A developmental switch in place cell accuracy coincides with grid cell maturation. Neuron. 2015;86:1167–1173. doi: 10.1016/j.neuron.2015.05.011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Muller RU, Kubie JL. The effects of changes in the environment on the spatial firing of hippocampal complex-spike cells. J Neurosci. 1987;7 doi: 10.1523/JNEUROSCI.07-07-01951.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Leutgeb S, et al. Independent codes for spatial and episodic memory in hippocampal neuronal ensembles. Science. 2005;309:619–623. doi: 10.1126/science.1114037. [DOI] [PubMed] [Google Scholar]
- 38.Wills TJ, Lever C, Cacucci F, Burgess N, O’Keefe J. Attractor dynamics in the hippocampal representation of the local environment. Science. 2005;308:873–876. doi: 10.1126/science.1108905. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Fyhn M, Hafting T, Treves A, Moser MB, Moser EI. Hippocampal remapping and grid realignment in entorhinal cortex. Nature. 2007;446:190–194. doi: 10.1038/nature05601. [DOI] [PubMed] [Google Scholar]
- 40.Lyttle D, Gereke B, Lin KK, Fellous JM. Spatial scale and place field stability in a grid-to-place cell model of the dorsoventral axis of the hippocampus. Hippocampus. 2013;23:729–744. doi: 10.1002/hipo.22132. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 41.Hargreaves EL, Rao G, Lee I, Knierim JJ. Major dissociation between medial and lateral entorhinal input to dorsal hippocampus. Science. 2005;308:1792–1794. doi: 10.1126/science.1110449. [DOI] [PubMed] [Google Scholar]
- 42.Mankin EA, Diehl GW, Sparks FT, Leutgeb S, Leutgeb JK. Hippocampal CA2 activity patterns change over time to a larger extent than between spatial contexts. Neuron. 2015;85:190–201. doi: 10.1016/j.neuron.2014.12.001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.Amaral DG, Ishizuka N, Claiborne B. Neurons, numbers and the hippocampal network. Prog Brain Res. 1990;83:1–11. doi: 10.1016/s0079-6123(08)61237-6. [DOI] [PubMed] [Google Scholar]
- 44.Zhang K, Sejnowski TJ. Neuronal tuning: To sharpen or broaden? Neural Comput. 1999;11:75–84. doi: 10.1162/089976699300016809. [DOI] [PubMed] [Google Scholar]
- 45.Steele RJ, Morris RG. Delay-dependent impairment of a matching-to-place task with chronic and intrahippocampal infusion of the NMDA-antagonist D-AP5. Hippocampus. 1999;9:118–136. doi: 10.1002/(SICI)1098-1063(1999)9:2<118::AID-HIPO4>3.0.CO;2-8. [DOI] [PubMed] [Google Scholar]
- 46.Nolan MF, et al. A behavioral role for dendritic integration: HCN1 channels constrain spatial memory and plasticity at inputs to distal dendrites of CA1 pyramidal neurons. Cell. 2004;119:719–732. doi: 10.1016/j.cell.2004.11.020. [DOI] [PubMed] [Google Scholar]
- 47.Brun VH, et al. Progressive increase in grid scale from dorsal to ventral medial entorhinal cortex. Hippocampus. 2008;18:1200–1212. doi: 10.1002/hipo.20504. [DOI] [PubMed] [Google Scholar]
- 48.Witter MP, Wouterlood FG, Naber PA, Van Haeften T. Anatomical organization of the parahippocampal-hippocampal network. Ann N Y Acad Sci. 2000;911:1–24. doi: 10.1111/j.1749-6632.2000.tb06716.x. [DOI] [PubMed] [Google Scholar]
- 49.Keinath AT, et al. Precise spatial coding is preserved along the longitudinal hippocampal axis. Hippocampus. 2014;24:1533–1548. doi: 10.1002/hipo.22333. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50.Barry C, Ginzberg LL, O’Keefe J, Burgess N. Grid cell firing patterns signal environmental novelty by expansion. Proc Natl Acad Sci U S A. 2012;43:17687–17692. doi: 10.1073/pnas.1209918109. [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.