SUMMARY
Regulated antimicrobial peptide expression in the intestinal epithelium is key to defense against infection and to microbiota homeostasis. Understanding the mechanisms that regulate such expression is necessary for understanding immune homeostasis and inflammatory disease, and for developing safe and effective therapies. We used Caenorhabditis elegans in a preclinical approach to discover mechanisms of antimicrobial gene expression control in the intestinal epithelium. We found an unexpected role for the cholinergic nervous system. Infection-induced acetylcholine release from neurons stimulated muscarinic signaling in the epithelium, driving downstream induction of Wnt expression in the same tissue. Wnt induction activated the epithelial canonical Wnt pathway, resulting in the expression of C-type lectin and lysozyme genes that enhanced host defense. Furthermore, the muscarinic and Wnt pathways are linked by conserved transcription factors. These results reveal a tight connection between the nervous system and the intestinal epithelium, with important implications for host defense, immune homeostasis, and cancer.
eTOC blurb
How intestinal epithelial antimicrobial defense functions are regulated is poorly understood. Using Caenorhabditis elegans, Labed et al. found infection-triggered neuronal acetylcholine release, driving intestinal defense gene expression via conserved muscarinic and Wnt pathways. This newly identified pathway may be relevant to the microbiota-gut-brain axis and immune homeostasis in humans.
INTRODUCTION
Innate host defenses, including antimicrobial peptides from the intestinal epithelium, are essential for defense against infection and for maintenance of the healthy microbiota (Hooper, 2015; Peterson and Artis, 2014). Although much is known about innate defenses in myeloid and lymphoid cells, much less is known about the regulation of antimicrobial peptide expression in the intestinal epithelium. Nonetheless, the intestinal epithelium is the most conserved host defense system (Bosch et al., 2009).
Caenorhabditis elegans gene clec-60 encodes a secreted C-type lectin related to mammalian antimicrobial lectin RegIIIγ (Vaishnava et al., 2011). clec-60 is upregulated in the intestinal epithelium during infection with Gram-positive pathogens, such as Enterococcus faecalis, Microbacterium nematophilum, and Staphylococcus aureus (O’rourke et al., 2006; Wong et al., 2007; Irazoqui et al., 2010), as well as Gram-negative Yersinia pestis (Bolz et al., 2010). In contrast, clec-60 is repressed by Pseudomonas aeruginosa and Salmonella enterica (Irazoqui et al., 2010; Head and Aballay, 2014). Overexpression of clec-60 results in enhanced host survival of infection (Irazoqui et al., 2010). Although differential expression of clec-60 suggests that it is controlled by pathogen-specific signal transduction pathways, the identity of such pathways is unknown. Thus, the dynamic and pathogen-specific expression profile of clec-60 makes an attractive model to investigate pathways that control the host response to infection.
Mammals and most invertebrates share a dependence on Toll-Like Receptors (TLRs) in the detection of Gram-positive bacterial infection (Akira et al., 2006). However, nematodes lack important components of canonical TLR pathways (Pujol et al., 2001). They also lack Nacht and Leucine-Rich domain containing proteins (NLRs). Despite the absence of both pattern recognition receptor (PRR) pathways, nematodes mount pathogen-specific transcriptional host responses to S. aureus (Irazoqui et al., 2010; Wong et al., 2007). Therefore, nematodes must possess a mechanism to detect S. aureus infection. In mammals, N-formyl peptides produced by bacteria are triggers of innate immune responses through the G-protein-coupled receptors (GPCRs), formyl peptide receptors 1 and 2 (Bloes et al., 2015). In C. elegans, the GPCR superfamily is greatly expanded (Rubin et al., 2000). GPCRs NPR-1 and FSHR-1 are involved in the C. elegans transcriptional and behavioral response to Gram-negative P. aeruginosa (Aballay et al., 2008; Powell et al., 2009). Because of this precedent, we hypothesized that a GPCR might function in the detection of S. aureus.
Instead, our studies revealed an unexpected connection between the canonical Wnt pathway and the neurotransmitter acetylcholine (ACh). Canonical Wnt signaling is important for intestinal development, homeostasis, and carcinogenesis in humans (Clevers and Nusse, 2012). In addition, it plays important roles in the function and activation of cells of the immune system (Silva-García et al., 2014). Disentangling the direct involvement of the canonical pathway in innate immunity from indirect roles through cellular differentiation remains challenging in mammalian models. In contrast to mammals, the nematode intestinal epithelium comprises just 20 fully differentiated cells (McGhee, 2007). These cells do not undergo anoikis, but remain functional for the entire life of the animal. Thus, canonical Wnt signaling in C. elegans is not involved in epithelial tissue renewal as it is in mammals, which greatly facilitates the study of its role in antimicrobial peptide production.
ACh secreted by cholinergic neurons engages ACh receptors on postsynaptic cells, including neurons and muscle cells. ACh receptors can be either muscarinic or nicotinic, which are GPCRs and ligand-gated ion channels, respectively (Rand, 2007). Muscarinic receptors engage downstream signaling pathways involving Gq, G11, Gi, or G0 heterotrimeric G proteins, depending on muscarinic receptor and cell type, to produce changes in gene expression and cellular function (Wess et al., 2007). In the central nervous system, muscarinic signaling is important for several behavioral and sensory processes, and has been implicated in Alzheimer’s disease and Parkinson’s disease. Peripheral muscarinic signaling controls cardiac rhythm, smooth-muscle contraction, and glandular secretion (Wess et al., 2007). In this work, we expanded the known roles of the muscarinic pathway to that of controlling host defense gene expression in the intestinal epithelium via the Wnt pathway. Because direct epithelial-neuronal synapses have not been described in this or any other organism (White et al., 1986; Yoo and Mazmanian, 2017), in C. elegans infection ACh appears to function in an endocrine fashion to engage muscarinic receptors in the intestinal epithelium and induce the expression of host defense genes through the activation of Wnt pathway.
RESULTS
Muscarinic signaling controls host defense
In addition to infection, induction of clec-60 was reported under conditions of nutritional deprivation (Melo and Ruvkun, 2012). To compare the induction of clec-60 under both conditions, we examined the expression of transcriptional reporter clec-60p::gfp (Irazoqui et al., 2008). In control animals fed ad libitum with Escherichia coli strain OP50, the standard laboratory diet, GFP expression was minimal (Fig. 1A). We observed similarly low GFP expression in animals that were starved for 8 h on the medium used in S. aureus infection assays (Fig. 1A, B). In contrast, animals that had been infected by feeding with S. aureus for 8 h exhibited greatly enhanced GFP expression in the intestinal epithelium (Fig. 1A, B). Thus, nutritional deprivation did not induce clec-60p::gfp under conditions used in S. aureus infection assays.
To identify GPCRs involved in pathogen detection upstream of clec-60, we performed a screen, in which we examined the induction of clec-60p::gfp by S. aureus in animals that had been treated with individual RNAi against 890 GPCR genes. Silencing of gar-2 resulted in defective GFP expression (Fig. S1A). Mutants defective in gar-2 function lived slightly longer than wild type on nonpathogenic E. coli (Fig. S1B) but exhibited a mild defect in survival of infection (Fig. S1C), suggesting that their response defect was biologically important. gar-2 encodes a muscarinic receptor (Hobert, 2013). The C. elegans genome contains two other genes for muscarinic receptors (gar-1 and gar-3), raising the possibility of redundancy. Simultaneous silencing of gar-2 and gar-3 synergistically reduced clec-60p::gfp induction (Fig. 1C, D), suggesting that gar-2 and gar-3 share redundant functions.
To determine if the activation of muscarinic receptors can elicit a similar response, we used the ACh-mimic arecoline (Gilani et al., 2004). Administration of arecoline to uninfected (i.e. E. coli-fed) animals was sufficient to induce clec-60p::gfp expression similar to that in infected animals (Fig. 1C, E). Arecoline also induced the endogenous expression of host defense genes clec-60, ilys-3, and lys-5 (Irazoqui et al., 2010). Furthermore, silencing of gar-2 and gar-3 abrogated arecoline-induced clec-60 expression (Fig. 1C, E). Muscarinic antagonist scopolamine (Hwang et al., 1999) impaired clec-60p::gfp induction by either S. aureus or arecoline (Fig. 1G–I). Oxotremorine, a specific muscarinic agonist, also induced clec-60 (Fig. 1J). Collectively, these results showed that muscarinic activation is necessary and sufficient for the induction of the host response to S. aureus.
Treatment with arecoline 24 h prior to infection led to significantly enhanced survival of infection (Fig. 1K) with no effect on aging (Fig. 1L). In contrast, scopolamine enhanced susceptibility to S. aureus (Fig. 1M). However, scopolamine also caused reduced lifespan on nonpathogenic E. coli (Fig. 1N). Mutants defective in gene unc-17, which encodes the vesicular ACh transporter (vAChT) necessary for loading ACh in synaptic vesicles (Alfonso et al., 1993), have impaired ACh release. unc-17 (vAChT) mutants were significantly susceptible to infection (Fig. 1O) with a minor aging defect (Fig. S1D). Aldicarb is a cholinesterase inhibitor that prevents the hydrolysis of ACh in neuromuscular junctions, resulting in paralysis. Aldicarb paralysis assays are useful for estimating the endogenous concentration of ACh in C. elegans (Mahoney et al., 2006). We used aldicarb paralysis assays to estimate the endogenous amount of ACh in animals that were infected with S. aureus for 20 min. Infected animals paralyzed 30% faster than control animals fed E. coli (Fig. 1P), indicating that endogenous ACh is released during infection.
Taken together, these observations supported a hypothesis that S. aureus, and cholinergic agonists oxotremorine and arecoline, trigger muscarinic receptors GAR-2 and GAR-3, resulting in the induction of downstream host defense genes (Fig. 1Q).
Gαq, phospholipase Cβ, and protein kinase Cη function downstream of muscarinic receptors to promote host defense
The muscarinic receptor pathway has been delineated partially in C. elegans. Muscarinic receptor GAR-3 signals through the α subunit of heterotrimeric G protein q (Gαq, encoded by gene egl-30), which activates phospholipase Cβ (PLCβ, encoded by egl-8) (Lackner et al., 1999; Miller et al., 1999; Steger and Avery, 2004). Silencing of either egl-30 or egl-8 abrogated clec-60p::gfp induction by infection (Fig. 2A, B) and mutants lacking egl-8 were unable to induce clec-60 (Fig. 2C). RNAi of egl-30 or egl-8 also prevented clec-60p::gfp induction by arecoline (Fig. 2D, E). Taken together, these results suggested that ACh may signal through a pathway controlled by GAR-2 and -3, which includes EGL-30 (Gαq) and EGL-8 (PLCβ). In support of this idea, we recently showed that EGL-30 is important during host defense (Najibi et al., 2016). In addition, we found that egl-8 mutants were unable to induce clec-60 in response to arecoline (Fig. 2F) and that, while the longevity of egl-8 mutants was slightly extended (Fig. 2H), their survival of infection was severely compromised (Fig. 2G). These results indicated that the EGL-30-EGL-8 axis plays an important and specific role for host defense against S. aureus downstream of ACh.
PLCβ is a major signaling hub (Rebecchi and Pentyala, 2000). It catalyzes the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) to generate diacyl glycerol (DAG) and inositol trisphosphate (IP3), second messengers that control a plethora of downstream signaling pathways. To identify signaling components that may function downstream of EGL-8 (PLCβ) during infection, we performed a screen to identify RNAi clones from a kinome library that prevented clec-60p::gfp induction by S. aureus. This screen identified pkc-1 (Fig. 2A, B), which encodes protein kinase Cη (PKCη) that is activated by diacyl glycerol (Stahelin et al., 2004). pkc-1 RNAi also abrogated the induction of clec-60p::gfp by arecoline (Fig. 2D, E). Partial loss-of-function pkc-1 mutants exhibited mildly defective host survival of infection (Fig. 2I), while their aging phenotype was unaffected (Fig. 2J). Whether such mild phenotype was a consequence of incomplete expressivity of the allele, or of partial redundancy with additional protein kinases, is unclear. Nonetheless, these results suggested that PKC-1 (PKCη) is an important signaling component of the pathway that links muscarinic receptors with host defense gene induction (Fig. 2K).
Wnt ligand is induced in response to infection and to acetylcholine
clec-60 induction by S. aureus is dependent on the β-catenin homolog bar-1, which functions within the canonical Wnt pathway (Irazoqui et al., 2008). To examine the role of the canonical Wnt pathway, we measured expression of key components during infection. Genes cwn-2, which encodes a Wnt ligand, and mig-1, which encodes Wnt receptor Frizzled, were highly induced, while Wnt gene mom-2 and Frizzled gene mom-5 were repressed (Fig. 3A). Furthermore, we found marked infection-induced expression of a translational reporter for CWN-2, in the intestinal epithelium (Fig. 3B, C). A transcriptional reporter for mig-1 was similarly induced (Fig. 3D, E). Thus, Wnt and its receptor were induced by S. aureus in the tissue where infection took place.
Systemic administration of arecoline or oxotremorine was sufficient to induce cwn-2 expression in uninfected animals (Fig. 3F, G). The CWN-2 reporter showed specific induction in the intestinal epithelium (Fig. 3H, I), as with infection. unc-17 mutants were unable to induce cwn-2 and clec-60 during infection (Fig. 3J, Fig. S1E), demonstrating that endogenous ACh was necessary. Furthermore, silencing of gar-2 and -3, egl-30, egl-8, and pkc-1, prevented induction of the CWN-2 translational reporter by infection (Fig. 3K). egl-8 mutation abrogated cwn-2 induction by arecoline in uninfected animals (Fig. 3L). These results showed that Wnt ligand was induced in the intestinal epithelium by the muscarinic pathway, and that muscarinic activation was both necessary and sufficient for epithelial induction of cwn-2.
Aldicarb assays showed that endogenous ACh amounts rose very quickly during infection, peaking at 10 min, and then diminishing and plateauing after 4 h (Fig. 3M). In contrast, endogenous cwn-2 and clec-60 mRNA concentrations showed highest expression after 16 h of infection (Fig. 3N). Together, these data supported a hypothesis that S. aureus induced ACh release, which drove the muscarinic pathway, whose activation induced Wnt ligand and Frizzled receptor in the intestinal epithelium (Fig. 3O).
Canonical Wnt signaling is necessary and sufficient for defense gene induction
Silencing of positive regulators in the canonical Wnt pathway (Sawa and Korswagen, 2013), including homologs of Wnt, Frizzled, Disheveled, β-catenin, and TCF(LEF), abrogated induction of clec-60p::gfp by S. aureus (Fig. 4A, B). Silencing of Frizzled homolog mig-1 impaired induction of a set of host response genes (Fig. 4C). Additionally, silencing of the Wnt signaling genes impaired induction of clec-60p::gfp by arecoline (Fig. 4D, E). Silencing of negative regulators in the canonical Wnt pathway, including homologs of Axin, Casein kinase I, and β-TrCP, resulted in constitutive induction of clec-60p::gfp in uninfected animals (Fig. 4F, G) in a bar-1 (β-catenin)-dependent manner (Fig. 4G). Silencing of negative regulator gene gsk-3, homologous to mammalian glycogen synthase kinase 3β (GSK-3β), resulted in constitutively high expression of several host defense genes in uninfected animals (Fig. 4H). Taken together, these results showed that activation of the canonical Wnt signaling pathway was necessary and sufficient to induce host defense gene expression by infection and by ACh.
Mutants defective in cwn-2 or mig-1 exhibited impaired infection survival (Fig. 4I, K) with no effect on aging (Fig. 4J, L). gsk-3 silencing resulted in enhanced host survival (Fig. 4M), even when it negatively affected aging (Fig. 4N). In contrast, gsk-3 silencing had no effect in animals lacking bar-1 function (Fig. 4O). These results demonstrated how activation of the canonical Wnt pathway enhanced host defense in a bar-1 (β-catenin)-dependent manner.
Arecoline administration, which activates muscarinic signaling, also resulted in enhanced survival of infection, while administration of scopolamine, which inhibited muscarinic signaling, impaired survival (Fig. 4P). Deletion of mig-1 (Frizzled) abrogated such effects (Fig. 4Q), again placing the Wnt pathway genetically downstream of muscarinic signaling. Muscarinic and Wnt pathway mutants showed no defects in aldicarb paralysis assays, ruling out the possibility that such mutations decrease ACh release (Fig. S2C to H). RNAi of egl-8 (PLCβ) or double RNAi of gar-2 and gar-3 did not enhance susceptibility in bar-1 (β-catenin) mutants, suggesting by epistasis analysis that gar-2, gar-3, egl-8 (PLCβ), and bar-1 (β-catenin) functioned in the same pathway (Fig. S2A). Additionally, unc-17, egl-8, and bar-1 null mutants showed similar susceptibilities to infection (Fig. S2B). Collectively, these observations supported a genetic pathway (Fig. 4R) in which S. aureus stimulated the release of ACh, which activated the muscarinic pathway, driving transcription of cwn-2 and mig-1 in the intestinal epithelium. Such activation of Wnt engaged the canonical Wnt pathway, resulting in the transcription of downstream host defense genes.
Canonical Wnt signaling functions post-developmentally
A key prediction of the pathway proposed in Fig. 4R is that the canonical Wnt pathway is activated in adult animals during infection, after its known roles in development (Sawa and Korswagen, 2013). The induction of cwn-2 and mig-1 in the intestinal epithelium strongly supports this prediction. Post-embryonic RNAi-mediated silencing has been used to circumvent developmental effects of key conserved genes, revealing phenotypes that would otherwise be masked by developmental defects or inviability (Curran, 2007). Adult-specific silencing of cwn-2, mig-1, and bar-1 resulted in defective host survival of infection (Fig. 5A, C, E), with little to no effect on aging (Fig. 5B, D, F), suggesting that the Wnt pathway functions during adulthood for host defense. Inorganic lithium compounds are known GSK-3β chemical inhibitors in clinical use. Brief administration of LiCl to adult uninfected animals resulted in high induction of clec-60p::gfp in a bar-1-dependent manner (Fig. 5G, H). Together, these results showed that post-developmental activation of canonical Wnt signaling in adult animals was necessary and sufficient for induction of host defense genes in the intestinal epithelium.
Muscarinic and Wnt signaling take place in the intestinal epithelium
Because intestinal epithelial clec-60 induction is under control of the canonical Wnt pathway, we examined whether the Wnt pathway functions in the intestinal epithelium. We adopted a method to produce RNAi-mediated silencing specifically in the intestinal epithelium (Luallen et al., 2015; Qadota et al., 2007). Intestine-specific silencing of genes mig-1 or bar-1 greatly impaired host survival of infection (Fig. 6A, B) with minor detrimental effects on aging. As mentioned, cwn-2 mutants exhibited defective survival of infection (Fig. 4I), but not defective aging (Fig. 4J). Re-expression of wild type cwn-2 only in the intestinal epithelium partially restored survival of infection in these mutants (Fig. 6D), whereas muscle-specific expression did not (Fig. 6E). Similarly, intestinal expression of mig-1 restored survival of infection in mig-1 mutants almost completely (Fig. 6F). These results showed that the canonical Wnt pathway functioned in the intestinal epithelium for host defense.
Because both unc-17 (the vesicular ACh transporter) and cha-1 (choline acetyltransferase) are expressed exclusively in the nervous system of C. elegans, it is thought that ACh is produced and released only by neurons in nematodes (Alfonso et al., 1993; Duerr et al., 2008; Pereira et al., 2015). We wondered if the muscarinic pathway might also function in the intestinal epithelium. Intestinal silencing of gar-2 or gar-3 caused mild infection survival defects (Fig. S3A, B), whereas simultaneous gar-2 and gar-3 silencing caused a strong defect (Fig. 6G), suggesting that these two receptors share redundant functions in the intestine. Simultaneous gar-2, gar-3 intestinal silencing greatly extended the lifespan of non-infected animals (Fig. 1I), ruling out that the enhanced susceptibility to infection was due to a defect in viability or aging. In addition, colony forming unit (cfu) assays did not show a difference in bacterial load between treated and control animals, indicating that the enhanced susceptibility was not caused by enhanced bacterial colonization of, or residence in, the intestine (Fig. S3C). Intestinal RNAi of egl-30 (Gαq) or of egl-8 (PLCβ) also strongly impaired host survival (Fig. 6G), but resulted in minor reductions of lifespan on E. coli, suggesting a possible role in aging (Fig. 6H). These results showed that the muscarinic pathway performed important functions for host defense in the intestinal epithelium.
Identification of transcription factors that link muscarinic and Wnt signaling
The results so far indicated that the muscarinic pathway and the downstream Wnt pathway functioned in the intestinal epithelium to control host defense gene induction. However, the mechanism of the connection between these two pathways was unknown. We determined that muscarinic signaling caused induction of cwn-2 (Fig. 3F–L), implying the existence of transcription factors that mediate muscarinic-induced Wnt induction. Therefore, we performed a reverse genetic screen to identify such transcription factors. Following gene silencing, we administered arecoline and measured clec-60p::gfp. Thus, we identified 10 transcription factor genes that were required for full clec-60p::gfp induction by arecoline (Fig. 7A). Because these transcription factors could be involved upstream or downstream of Wnt signaling, we measured cwn-2 induction after arecoline treatment. We expected genes that function as a link between muscarinic and Wnt signaling to disrupt cwn-2 induction by arecoline. Out of the 10 candidate genes, only 4 satisfied this criterion (Fig. 7B). Because of the availability of genetic tools and its evolutionary conservation, we decided to focus on one such gene, lin-1, which is homologous to human ELK1-3 transcription factor genes with known roles in inflammation (Oettgen, 2006).
Genetic deletion of lin-1 (ELK) partially impaired arecoline induction of clec-60 (Fig. 7C) and strongly impaired induction of cwn-2 (Fig. 7D). A gain of function allele of lin-1 (ELK) was sufficient for high constitutive expression of clec-60 (Fig. 7E) and cwn-2 (Fig. 7F) in uninfected animals. These results indicated that lin-1 was sufficient and partially necessary for host defense gene induction downstream of ACh.
Intestine-specific silencing of lin-1 (ELK) strongly impaired host survival of infection (Fig. 7G), with no effect on aging (Fig. 7H). Furthermore, genetic epistasis experiments showed a lack of effect of lin-1 RNAi in the survival of infected bar-1 (β-catenin) mutants (Fig. S5), consistent with lin-1 (ELK) and bar-1 (β-catenin) participating in the same pathway. Thus, lin-1 (ELK), and potentially other genes identified in our screen, mediate control of Wnt signaling by the muscarinic pathway.
DISCUSSION
C. elegans possess a simple nervous system, comprising 302 neurons (White et al., 1986)). C. elegans neurons are divided into sensory, interneuron, and motor neuron classes. A majority of the neurons in C. elegans serve sensory functions and are present in the anterior head region, where they are organized into ganglia surrounding the pharynx. About 150 neurons are thought to synthesize and release ACh (Duerr et al., 2008; Pereira et al., 2015). Sensory, interneuron, and motor neurons can be cholinergic. Synapses connecting neurons and the intestinal epithelium have not been observed.
Our results suggested that ACh, released from the nervous system in response to infection with S. aureus, functioned in a neuroendocrine fashion to activate muscarinic receptors in the intestinal epithelium. This activation led to increased expression of Wnt and its receptor Frizzled in the intestinal epithelium. Wnt, presumably secreted to the basolateral side of the polarized epithelium, could signal to the intestinal epithelial cells in an autocrine and paracrine fashion. Activation of the canonical Wnt pathway led to the induction of host defense genes, including antimicrobials such as C-type lectin clec-60 and lysozymes. The genetic link between the muscarinic and Wnt pathways was mediated by at least four highly conserved transcription factors, including the Ets family transcription factor LIN-1, which is homologous to human transcription factors ELK1-3.
The nervous system may have evolved to stimulate cells distal from the site of activation, injury, or infection to help produce an integrated physiological response to insult. Also, this mechanism may allow the translation of a fast and short-lived signal (ACh) to a slow and longer-lived signal (Wnt ligand) to produce a robust response to infection. Furthermore, release of ACh increases C. elegans locomotion (Rand, 2007). Pathogen-triggered ACh release may thus provide an elegant way of coupling emergency evasive behaviors with the enhanced expression of host defense genes. This view is supported by previous work, which showed that cholinergic signaling is involved in the behavioral response to infection by Microbacterium nematophilum (McMullan et al., 2012).
Our studies highlight muscarinic signaling as a key mechanism by which the nervous system controls intestinal epithelial host defense. In mice and humans, the vagal nerve and the enteric nervous system project cholinergic fibers to the viscera and the intestinal epithelium (Erickson et al., 2014; Foong et al., 2014; Gautron et al., 2013; Jönsson et al., 2007; Matteoli and Boeckxstaens, 2013). Muscarinic receptors are broadly expressed in the mammalian intestinal epithelium (Harrington et al., 2010; Khan et al., 2013). In vitro, muscarinic stimulation of intestinal epithelial cells modulated ion secretion, cell proliferation, and barrier permeability and repair (Hirota and McKay, 2006; Khan et al., 2014; Peng et al., 2013). However, mammalian epithelial cells and other cells are capable of producing and secreting non-neuronal ACh (Grando et al., 2015). Therefore, muscarinic signaling at the mammalian intestinal epithelium is complex and its function is poorly understood.
Nonetheless, emerging clues hint that epithelial muscarinic signaling is important for immune homeostasis at several mucosal sites in mammals. For example, muscarinic stimulation of intestinal epithelial cells prevents barrier disruption under inflammatory conditions (Dhawan et al., 2015). OCTN1, which encodes an ACh exporter, is a susceptibility locus for Crohn’s disease (Pochini et al., 2012). Muscarinic stimulation causes IL-8 secretion by bronchial epithelial cells, driving inflammation (Profita et al., 2008). Muscarinic signaling is important during experimental sepsis (Amaral et al., 2016; Jeremias et al., 2016), and anticholinergic treatment is associated with community-acquired pneumonia in elderly adults (Chatterjee et al., 2016). Mice lacking M3 muscarinic receptor exhibit impaired pro-inflammatory signaling and clearance of bacterial and helminth infections (Darby et al., 2015; McLean et al., 2015). Secretion of ACh by mouse T cells enhances antimicrobial peptide production by the intestinal epithelium via muscarinic signaling (Dhawan et al., 2016). Anti-muscarinic therapies for the treatment of inflammation are being considered in diseases such as chronic obstructive pulmonary disease (COPD) or inflammatory bowel disease (IBD) (Matera et al., 2014; Sales, 2010; Verbout and Jacoby, 2012). However, the molecular mechanisms by which muscarinic signaling enhances mucosal host defense are not known.
The canonical Wnt pathway plays several important roles in the mammalian intestinal epithelium, including development, homeostasis, and repair after inflammation (Karin and Clevers, 2016). Wnt signaling within Paneth cells (crypt epithelial cells specialized for antimicrobial peptide secretion) is critical for antimicrobial gene expression (Clevers and Bevins, 2013; Clevers et al., 2007). Wnt signaling defects in Paneth cells are associated with IBD (Bevins and Salzman, 2011; Clevers et al., 2007; Kini et al., 2015; Koslowski et al., 2009, 2012). Thus, our delineation of a canonical Wnt pathway that is important for antimicrobial peptide expression in the nematode intestine highlights evolutionary conservation of its host defense function.
We identified four conserved transcription factor genes as genetic links between the muscarinic and Wnt pathways. hlh-26 has weak resemblance to human genes HEYL and ARNTL2, and hlh-34 is related to NPAS3 and HIF1A. ceh-6 and lin-1 are homologous to human genes POU3F1-4 and ELK1-3, respectively. lin-1 is under control of the ERK signaling cascade in C. elegans (Lackner and Kim, 1998), and had not been implicated in host defense previously. Human ELK1 is activated downstream of muscarinic-Gαq-PKC signaling (Blaukat et al., 2000; Rössler et al., 2008). Both ELK1 and ELK3 are known to be important for host defense induced by bacterial peptidoglycan and for phagocytosis of bacteria by macrophages (Tsoyi et al., 2015; Xu et al., 2001). Thus, our results placing lin-1 (ELK) as a link between upstream muscarinic signaling and downstream Wnt signaling are of great importance.
Genetic and pharmacological inhibition of muscarinic signaling reduces intestinal epithelial cell proliferation and carcinogenesis in mice (Raufman et al., 2008). In humans, cholinergic fibers of the vagal nerve enhance gastric tumorigenesis, by enhanced Wnt3 expression driven by the M3 muscarinic receptor (Zhao et al., 2014). This observation provides a striking clinical parallel to our results, highlights their clinical relevance, and suggests that the implications of our findings may transcend host-pathogen interactions. Moreover, members of the human microbiota are able to produce physiologically relevant quantities of ACh (Sarkar et al., 2016), perhaps providing a direct mechanism of microbiota-epithelium interaction, and an avenue of therapeutic intervention for chronic inflammation. It seems likely that cholinergic induction of Wnt in the gut epithelium constitutes a fundamental mechanism of the so-called Gut-Brain-Microbiota axis of immune homeostasis (Dhawan et al., 2012; Tracey, 2014).
STAR★Methods
Contact for Reagents and Resources
Further information and requests for reagents may be directed to, and will be fulfilled by the corresponding author Javier E. Irazoqui (Javier.Irazoqui@umassmed.edu).
Experimental Model
C. elegans strains
C. elegans strains were grown on nematode-growth media (NGM) plates seeded with E. coli OP50 at 15 – 20 °C, according to standard procedures (Powell and Ausubel, 2008).
Method Details
Infection
S. aureus HA-MRSA USA100 (Carroll et al., 2013) was grown overnight in tryptic soy broth (TSB) containing 50 μg/ml kanamycin (KAN). 10 μl of overnight cultures was uniformly spread on the entire surface of 35 mm TSA plates containing 10 μg/ml kanamycin, and incubated 4–6 h at 37 °C. Animals we re treated with 80–100 μg/ml 5-fluoro-2′-deoxyuridine (FUDR) at L4 larval stage for 24 h at 15 °C before transfer to S. aureus plates. After FUDR treatment, 25 – 40 infertile animals were transferred to each of three replicate infection plates per strain. Survival was quantified as described (Powell and Ausubel, 2008). Animals that died of bursting vulva, matricidal hatching, or crawling off the agar were censored.
Starvation
Worms were supplemented with 80–100 μg/ml FUDR at L4 larval stage for 24 h at 15 °C before transfer to solid TSA plates without bacteria. After 8 h, animals were harvested for imaging.
Longevity (aging) assays
All assays were performed as described in (Powell and Ausubel, 2008). Animals were transferred to NGM plates seeded with E. coli OP50, supplemented with 80 – 100 μg/ml FUDR and incubated at 25 °C. Experiments were performed at least twice.
RNAi by feeding
RNAi was carried out using bacterial feeding RNAi (Timmons et al., 2001). Briefly, 8 to 12 gravid adult worms were spot-bleached in 20% alkaline hypochlorite solution directly on the plates (outside the bacterial lawn) to synchronize progeny. Progeny of bleached adults were treated with FUDR at the L4 larval stage for 24 h at 15 °C prior to use. The RNAi plates contain E. coli HT115 carrying vector L4440 (empty vector) or expressing dsRNA of selected genes. Adult RNAi treatment was done by incubating young adult animals for 2 days at 15 °C on RNAi plates. gar-2 and gar-3 double RNAi plates were prepared by adding a mixture of 150 μl of overnight culture of HT115 carrying gar-2 RNAi and 150 μl of HT115 carrying gar-3 RNAi. HT115 RNAi clones were obtained from the Ahringer genomic RNAi library, or the Vidal library when absent in the former. Clone identity was confirmed by sequencing, and absence of off target effects was verified against predictions by the C. elegans genomic database resource, WormBase (www.wormbase.org). RNAi gene silencing was confirmed by real-time RT-PCR (Fig. S4).
RNAi Screening
Briefly, 2,000 gravid adult, clec-60p::gfp worms were bleached with alkaline hypochlorite, followed by several washes with M9 buffer (Powell and Ausubel, 2008). Subsequently, the eggs were incubated in M9 buffer overnight at room temperature. RNAi was carried out using bacterial feeding on L1 stage animals in a semi-automated liquid setup until they reached the young adult stage at 15 °C (Lehner et al., 2006). Following RNAi treatment, animals were washed and transferred to solid medium in 96 well plates containing S. aureus for the induction of clec-60p::gfp. The RNAi sub-libraries used, assembled from the Ahringer and Vidal genomic libraries, were: GPCRs (1748 genes; assembled by Justine Melo, MGH), protein kinases (441 genes; assembled by Javier Irazoqui, MGH), and transcription factors (427 genes; assembled by Sean Curran and Dave Simon, MGH).
Aldicarb assays
Aldicarb paralysis after infection was performed using a previously described protocol (Mahoney et al., 2006) with minor changes. Briefly, 30 young adult animals were placed for 10 min to 12 h on infection plates. Next, animals were immediately transferred to TSA (Tryptic Soy Agar) plates containing 1 mM aldicarb (Sigma-Aldrich) and 100 μl of 10X overnight culture of OP50. Paralysis was quantified blindly at room temperature.
qRT-PCR
After treatment, C. elegans were collected in M9 buffer and lysed using TRI Reagent (Molecular Research Center) following manufacturer’s instructions. cDNA was obtained with iScript cDNA (Bio-Rad) and qRT-PCR was performed using iQ SYBR Green (Bio-Rad), as described previously (Irazoqui et al., 2010). Data analysis was performed using the Pfaffl method (Pfaffl, 2001).
Imaging
Animals expressing a fluorescent reporter gene were kept for 1 h at room temperature prior to imaging. Animals were next harvested by washing with M9 buffer (Powell and Ausubel, 2008), and paralyzed with 10 % NaN3 in half-well 96-well plates. Image acquisition was automatically performed using a Cytation 3 Imaging Plate Reader (Biotek).
Drug treatments
Arecoline hydrobromide (Sigma, 31593-250MG), 1 mM for killing assays and 5 mM for other experiments; Scopolamine (Sigma PHR1470-500MG), 1 mM for killing assays and 5 mM for other assays; Oxotremorine (sigma, O100-100MG) 1 mM, LiCl (Sigma 203637-10G) 100 mM). For killing assays and qRT-PCR, all drug treatments were performed on solid NGM plates supplemented with drug. Animals were treated at the young adult stage and incubated at 25 °C for 24 h. After 16 h, animals were harvested for killing assays or qRT-PCR. For reporter gene quantification, all drug treatments were performed in NGM liquid culture for 16 h. Subsequently, animals were washed with M9 buffer and prepared for imaging.
Quantification and Statistical Analysis
Statistical analyses were performed using Prism 6 software (GraphPad). Survival data were compared using the Log-Rank test. Data are represented as median survival (MS), as defined by Kaplan-Meier analysis, or Time to 50% Death (LT50), as defined by nonlinear regression. A p value ≤ 0.05 was considered significantly different from control. For qRT-PCR, two-sample, two-tailed t tests were performed to evaluate differences among pooled ΔCt values according to Pfaffl (Pfaffl, 2001) using Excel. A p value ≤ 0.05 was considered significant. For image quantification, two-sample, two-tailed t tests were performed. Prior to use of the t-test, all values were confirmed for normal distribution by the Agostino Pearson omnibus test.
Supplementary Material
Highlights.
Acetylcholine regulates transcriptional host defense in intestinal epithelial cells
Acetylcholine activates muscarinic and Wnt signaling in the intestine
Transcription factor lin-1 (ELK) links muscarinic and Wnt pathways by Wnt induction
Acknowledgments
Dr. Frederick Ausubel and his laboratory provided generous intellectual input and shared laboratory space and equipment. Research reported in this publication was supported by the National Institute of General Medical Sciences of the National Institutes of Health under award number GM101056, and by the National Science Foundation under award number NSF1457055 (to J.E.I.). Some strains were provided by the CGC, which is funded by the NIH Office of Research Infrastructure Programs (P40 OD010440). The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
Footnotes
Author Contributions
S.L. performed, analyzed, and reported most experiments. K.W. performed aldicarb assays and specific experiments. S.J. and A.H. helped with the RNAi screens. M.N. contributed to specific experiments. J.E.I. provided key intellectual input and overall guidance for experimental design, execution, interpretation, and reporting. All authors contributed to writing the manuscript.
Declaration of interests
The authors declare no competing interests.
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