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Journal of Obstetrics and Gynaecology of India logoLink to Journal of Obstetrics and Gynaecology of India
. 2018 Jan 25;68(6):462–470. doi: 10.1007/s13224-017-1061-9

Single Nucleotide Polymorphism-Based Noninvasive Prenatal Testing: Experience in India

Ishwar Chander Verma 1, Ratna Puri 1, Eswarachary Venkataswamy 2, Tulika Tayal 3, Sheela Nampoorthiri 4, Chitra Andrew 5, Madhulika Kabra 6, Rashmi Bagga 7, Mamatha Gowda 8, Meenu Batra 9, Sridevi Hegde 10, Anita Kaul 11, Neerja Gupta 6, Pallavi Mishra 6, Jayshree Ganapathi Subramanian 1, Shruti Lingaiah 2, Riyaz Akhtar 2, Francis Kidangan 2, R Chandran 2, C Kiran 2, G R Ravi Kumar 2, V L Ramprasad 2, Priya Kadam 2,
PMCID: PMC6207553  PMID: 30416273

Abstract

Introduction

Noninvasive prenatal testing (NIPT) has revolutionized prenatal screening for chromosomal aneuploidies in some countries. Its implementation has been sporadic in developing countries. Given the genetic variation of the people in different countries, we evaluated the performance of the SNP-based NIPT in India .

Materials and Methods

The Panorama™ NIPT was performed in 516 pregnancies, which had tested intermediate-to-high risk on conventional first and second trimester screening. Results were confirmed either by invasive diagnostic testing or by clinical evaluation after birth.

Results

Of 511 samples analyzed, results were obtained in 499 (97.7%). Of these, 480 (98.2%) were low risk and 19 were high risk. A sensitivity of 100% was obtained for detection of trisomies 21, 18, 13 and sex chromosomal abnormalities. The specificity ranged from 99.3 to 100% for abnormalities tested. Taken together, the positive predictive value for trisomies 21, 18, 13 and monosomy X was 85.7%. The average fetal fraction was 8.2%, which is lower than the average observed elsewhere.

Conclusion

This is the first report of detailed experience with NIPT in India and demonstrates comparable performance in all aspects of testing to the results elsewhere.

Keywords: Prenatal screening, India, NIPT, SNP, Trisomy 21, Trisomy 18, Trisomy 13, Chromosomal aneuploidies

Introduction

The incidence of chromosomal disorders in India is 1:166 live births [1]. Given the large population, around 35,000 fetuses with Down syndrome alone are conceived every year [1]. Therefore, screening and diagnosis for chromosomal disorders is important in India, as in other countries. The current prenatal screening for chromosomal abnormalities consists of analyzing blood hormone levels and ultrasonography. However, these procedures are limited by low sensitivity and high false positive rate of 2–7% [2, 3]. Also, conventional screening misses over 10% of affected fetuses [4]. Invasive diagnostic methods, such as amniocentesis or chorionic villus sampling (CVS), are highly sensitive but cannot be offered to all pregnant women as they carry a small but significant risk of miscarriage [5, 6].

NIPT, a recently developed advanced technology provides a significant improvement over conventional testing, with detection rate of over 99% and a false positive rate of less than 0.1% by investigation of cell-free fetal (placental) DNA from maternal blood [711]. Furthermore, a significant reduction, 50–70%, of invasive procedures has been observed in setups where NIPT has been implemented [12, 13].

Commercialized NIPT technologies follow either of the two approaches: a counting-based method using massively parallel sequencing (MPSS) or the single nucleotide polymorphism-based approach (SNP), used in the Panorama™ NIPT developed by Natera Inc. (San Carlos, USA). The technology and the performance of the SNP-based method has been described elsewhere and validated both in high and low risk pregnant women [1420]. The advantage of this method is that it does not require a reference chromosome, is able to detect vanishing twin, triploidy, maternal mosaicism and is highly accurate [16]. The limitation has been, rarely, the inability to make a call when there is a high genetic homology between parents (consanguinity) [21]. However, improvement of the algorithm has been implemented, such as quantitative multiple model (QMM) that resolves samples with genetic homology [personal communication] and reduction in no-call threshold for sample calling to 2.8% fetal fraction [22]. Several professional societies worldwide have issued guidelines periodically based on available data on appropriate usage of NIPT [13, 2327].

The Indian population is socioculturally, ethnically and biologically diverse [28] as reflected in the studies of mutations detection that reveal many novel ones. Additionally, the Indian population has a relatively high rate of consanguinity (20–39%) among certain communities [29, 30]. It is not known how these biological factors would influence the SNP-based NIPT test. The collection and handling of samples in a tropical country might also affect the test performance. To study the feasibility of performing NIPT in an Indian population given the above considerations, we conducted an Indian study. The main objective was to evaluate the performance of NIPT for trisomies 21, 18, 13, sex chromosome abnormalities and triploidy in a cohort with intermediate-to-high risk on conventional screening.

Materials and Methods

Ten leading institutes collaborated in this study, after review and approval from their respective institutional review boards. The flowchart of the study protocol is shown in Fig. 1. Pregnant women were enrolled based on the specified criteria. Singleton pregnancies, between 11 and 18 weeks gestation (CRL 45–84 mm), intermediate-to-high risk (risk > 1:1000 for trisomy 21 and > 1:400 for trisomy 18, Nuchal Translucency (NT) measure < 95th centile) on biochemical, combined, triple or quadruple screening were included. Score of > 1:250 was defined as high risk and between 1:250 and 1:1000 as intermediate risk. While pregnancies with egg/sperm donor, surrogacy, twin or multiple gestation, with known parental chromosomal abnormalities (including known balanced translocations), where invasive testing was planned, NT > 95th percentile or nuchal fold thickness > 6 mm, ≥ 1 malformation in fetus, bone marrow transplant or malignancy patients were excluded.

Fig. 1.

Fig. 1

Study protocol. Samples were selected based on pre-determined criteria; all women were provided genetic counseling pre- and post-NIPT, invasive and ultrasound tests. TP—true positive, FP—false positive

Twenty milliliters of peripheral blood was collected in Streck™ tubes after genetic counseling and informed consent. A paternal buccal swab was obtained when available. Samples were transported to Medgenome Laboratory in Bangalore. Laboratory testing was performed using validated protocol from Natera Inc., using SNPs on five chromosomes and analyzed by the cloud-based proprietary NATUS algorithm [10, 14, 15, 22], the enhanced version of which became available during the course of the study. Fetal fraction was reported in each case. In accordance with the legal requirements in India, gender was not revealed to any study personnel [31]. Pertinent details were collected from the pregnant women. For women who underwent invasive test, fluorescence in situ hybridization and karyotyping was done on fetal material. Redraws were requested for these reasons: lysis, low sample volume, fetal fraction below threshold (2.8%), failed quality matrices, and algorithm-based outcomes such as low confidence results. Follow-up information was obtained from the participants till the delivery. Information on false negative outcomes was keenly sought.

Data Analysis

Sensitivity and specificity for each disorder were calculated separately using only confirmed cases after diagnostic tests or clinical evaluation after birth. Samples that received a no-call were not included. Descriptive data analysis was performed. Where applicable, the t test was used for statistical analysis, and p < 0.05 was accepted as significant.

Results

The demographic data did not differ significantly among the various groups, except; in the no-call group, the maternal weight and BMI were higher (though statistically not significant), while the fetal fraction was significantly lower as compared with the other two groups (p < 0.05) (Table 1). The overall results are depicted in Fig. 2, while details of each high-risk result are shown in Table 2. Fourteen (73.7%) of 19 high-risk NIPT calls and 323 (67.3%) of 480 of low-risk NIPT calls had a prior high risk on conventional screening, while 5 of 19 (26.3%) high risk and 157 of 480 (32.7%) low risk were in the intermediate-risk range (p > 0.05). No significant association was found between a high- or low-risk call with advanced maternal age (p > 0.05). Table 3 lists the test performance for each chromosomal abnormality, based on the cytogenetic results; combined positive predictive value (PPV) for all chromosomal abnormalities was 81.25%.

Table 1.

Demographics of the 516 pregnant women included in the study

All Low riska High riskb No-callc
Maternal age (yr) n 516 480 19 12
Mean (± SD) 31.8 ± 4.8 31.8 ± 4.8 31.7 ± 5.8 32.6 ± 4.0
Median 32 32 32 32.5
Range 20–44 20–44 23–42 27–40
Gestational age (weeks and days) n 516 480 19 12
Mean (± SD) 14w 6d ± 1w 6d 14w 6d ± 1w 6d 14w 3d ± 1w4d 15w 2d ± 1w3d
Median 14w 4d 14w 4d 14 w 3d 15w 1d
Range 11w–20 w 11w–20d 12w2d–17w2d 13w4d–17w5d
Maternal weight (kg) n 445 416 19 10
Mean (± SD) 63.3 ± 11.3 63.1 ± 11.2 63.3 ± 13 67.6 ± 11.8
Median 62 62 62.9 65.2
Range 38.5–115 38.5–115 43.1–103 51.5–93
Maternal height (cm) n 283 264 13 6
Mean (± SD) 160 ± 10 160 ± 10 160 ± 4 160 ± 10
Median 158 160 160 160
Range 141.8–187 141.8–187 151–165 151–164
Maternal BMI (ht/m2) n 281 262 13 6
Mean (± SD) 25.5 ± 4.2 25.5 ± 4.2 24.2 ± 3.7 27.3
Median 25.2 25.2 24.5 27.4
Range 17.1–46.1 17.1–46.1 17.3–32 21–27
Fetal fraction (%) n 516 480 19 12
Mean (± SD) 8.3 ± 3.4 8.3 ± 3.4 9.2 ± 3.3 3.9 ± 2.5
Median 7.6 7.6 9.1 3.1
Range 2.1–18.7 3–18.7 4.4–15.5 2.1–11.5

aLow Risk on the NIPT test

bHigh risk on NIPT test (includes the two samples reported as high risk on for sex chromosome abnormalities)

cNo-call

Fig. 2.

Fig. 2

Summary of Panorama™ results of the five excluded cases: two were out of specification for testing, one was twin gestation with fetal demise (one twin), two samples did not meet the pre-analytical criteria. T21—trisomy 21, T13—trisomy 13, T18—trisomy 18, MX—monosomy X

Table 2.

Summary of abnormal NIPT results, confirmation and outcome

MA (years) GA Prior risk NIPT FF (%) NIPT risk score Confirmatory invasive test TP/FP Outcome
1 23 14w4d 1:68 risk on combined screening T21 9.2 >99/100 Amniocentesis TP Terminated
2 34 17w 1:50 risk on quadruple screening T21 6.4 >99/100 Amniocentesis TP Terminated
3 30 12w3d 1:157 risk on combined screening T21 12.9 >99/100 Not performed NA IUD at 24 weeks
4 34 13w 1:50 risk on combined screening T21 14.7 >99/100 CVS TP Terminated
5 37 13w3d 1:48 risk on combined screening. T21 6.9 >99/100 Not performed NA Terminated
6 35 12w3d 1:160 risk on combined screening T21 10.1 >99/100 Amniocentesis TP Terminated
7 24 15w1d 1:8 risk on combined screening T21 14.4 >99/100 CVS TP Terminated
8 38 17w2d 1:55 risk on triple screening T21 6.9 >99/100 Amniocentesis FP Term delivery, normal baby
9 24 14w3d 1:115 risk on combined screening MX 8.0 >99/100 Amniocentesis *TP Terminated
10 30 13w4d 1:90 risk on combined screening MX 9.1 >99/100 Amniocentesis TP Terminated
11 28 17w 1:318 risk on quadruple screening T21 15.5 >99/100 Amniocentesis TP Terminated
12 38 15w4d 1:1250 risk on combined screening Suggestive XXY 10.7 Amniocentesis FP Term delivery, normal baby
13 36 15w1d 1:82 Biochemical risk (T13/18–1:371) T21 7.8 >99/100 Amniocentesis TP Terminated
14 32 12w2d 1:1065 on combined screening T21 4.7 >83/100 Amniocentesis FP Term delivery, normal baby
15 42 14w6d 1:199 risk on combined screening Suggestive XXX 9.0 Amniocentesis TP Term delivery
16 38 14w2d 1:729 risk on combined screening T21 4.6 >99/100 Amniocentesis TP Terminated
17 31 13w5d 1/329 risk on combined screening T13 9.4 >99/100 Amniocentesis TP Terminated
18 24 12w3d 1:50 risk on combined screening T21 9.9 >99/100 Not performed NA Terminated
19 25 16w5d >1:50 risk on combined screening T18 4.4 >99/100 Amniocentesis TP Terminated

MA—maternal age at expected date of delivery; GA—gestational age represented in weeks and days; prior risk refers to the risk on combined screening, triple screening or quadruple screening; IUD—intrauterine death, MX—monosomy X, *Isochromosome X with deletion of p arm was noted on karyotyping, which is a variant of Turner syndrome. Confirmation of the NIPT result was performed by fluorescence in situ hybridization followed by karyotyping or Karyolite BOBS (sample 12) after either amniocentesis or chorionic villus sampling (CVS) (sample 4 and 7). TP—true positive, FP—false positive, N.A—not available. The aneuploidy risk score of Sample 12 and 14 was lower than < 1000, but the samples were still included in the study

Table 3.

Performance of noninvasive prenatal test in detecting Trisomies 21, 18,13, monosomy X and sex chromosome abnormalities (SCA)

N TP n FP n FN n UC Sensitivity (%, C.I. 95%) Specificity (%, C.I. 95%) PPV (%, C.I. 95%) NPV (%, C.I. 95%)
Overall 19 13 3 0 3 100 (73.5–100) 99.3 (98.1.9–99.9) 81.25 (58.4–93.5) 100 (98.9–100)
Trisomy 21 13 8 2 0 3 100 (63.1–100) 99.4 (98.4–99.9) 80 (50.1–94.1) 100 (98.9–100)
Trisomy 18 1 1 0 0 0 100 (2.5–100) 100 (99.1–100) 100 (2.5–100) 100 (98.9–100)
Trisomy 13 1 1 0 0 0 100 (2.5–100) 100 (99.1–100) 100 (2.5–100) 100 (98.9–100)
Monosomy X 2 2 0 0 0 100 (15.8–100) 100 (98.97–100) 100 (15.8–100) 100 (98.9–100)
Other SCA (XXX and XXY) 2 1 1 0 0 100 (2.5–100) 99.7 (98.3–99.9) 50 (12.4–87.6) 100
Theoretical PPV values Trisomy 21 All four abnormalities
Lower boundary (all unconfirmed cases considered false positives) 61.5% (8/13) 70.6% (12/17)
Upper boundary (all unconfirmed cases considered true positives) 84.6% (11/13) 88.2% (15/17)

PPV—Positive predictive value, NPV—negative predictive value (NPV), UC—unconfirmed, TP—true positives, when high-risk samples were confirmed by invasive testing, FP—false positive, high-risk samples that tested normal on confirmatory testing

Follow-Up

Follow-up information was received from 477 of 511 (93.3%) cases. The uptake for invasive testing was 16 (84.2%) of 19 women (Table 2). Two women terminated the pregnancy without confirmatory testing (2/19, 10.5%), and one woman (1/19, 5.3%) refused invasive test. These three unconfirmed cases of trisomy 21 were suggestive of abnormality as intrauterine death was reported in one case and ultrasound abnormalities in the other two. Follow-up information was available in 452 (94.2%) of 480 low-risk cases, eleven of which were confirmed normal after invasive test (performed for other reasons) and the rest were clinically normal at birth. Follow-up information was received in 9 (81.8%) of 11 no-call cases (Table 4). No follow-up was obtained in 28 (5.8%) of 480 cases, which were excluded from statistical analysis where applicable. No false negatives were reported till the time of publication.

Table 4.

Summary of no-call cases

Sl no MA GA Original sample FF (%) Repeat sample (FF  %) Outcome
1 29 13w4d Low confidence 3.2 N.R. Term normal baby
2 33 16w QC failure 2.9 N.R. Term normal baby
3 28 16w2d Low FF 2.1 N.R. Severe oligohydramnios, other abnormalities, terminated
4 32 14w2d Low FF 2.3 Low FF (2.3) IUGR baby at term
5 36 16w3d QC failure/ambient and genotype contamination 11.5 N.R. Term normal baby
6 37 13w4d Low confidence 4 N.R Amniocentesis performed, FISH and karyotype normal
7 36 17w5d Low confidence 2.8 Low confidence (2.8) LTFU
8 30 17w2d Low FF 2.6 N.R LTFU
9 33 13w6d Low confidence 3.1 N.R T18 suspected, unconfirmed, terminated
10 27 16w5d Low FF 2.3 Low confidence (3.1) Preterm normal baby
11 40 14w Fetal Haploblock 4.5 Not requested LTFU
12 31 14w1d Fetal Haploblock 4.5 N.R Amniocentesis performed, FISH and karyotype normal

MA—maternal age at term, GA—gestational age at first sample, IUGR—intrauterine growth retardation, LTFU—lost to follow-up, FF—fetal fraction, NR—requested but not received, Low FF—fetal fraction below threshold < 2.8%. Redraw was not requested for a no-call sample with an uninformative result due to fetal haploblock (Sample 11). However, with the newer version of the NATUS algorithm available during the study, a redraw was requested for a subsequent sample with a no-call due to fetal haploblock (Sample 12)

Redraws

Of 511 cases, 30 (5.9%) redraws were requested due to a combination of pre-analytic and post-analytic factors. The causes of redraw were: low sample volume/moderate to severe lysis (7), low confidence result (10), fetal fraction below threshold (5), failed libraries (4), failed quality control (2), ambient genotype contamination and an uninformative DNA pattern one each. Pre-analytical factors accounted for 23% of the redraws, while the laboratory processing and algorithm-based redraws were 76.7%. Redraws were received in 22 (73.3%) of 30 samples, and a definitive result was obtained in 19 (86.3%) of 22 redraws.

Turnaround Time

Most samples (97.2%) were received within 48 h. Most (88.8%) samples were reported within 12 days (Fig. 3). The average turnaround time for reporting was 7 calendar days.

Fig. 3.

Fig. 3

The turnaround time (TAT) for reporting NIPT samples

Fetal Fraction (FF)

The average FF in the no-call cases (3.9%) was significantly lower than in samples that received a call (8.7%) (Welch two-sample t test, p < 0.001) (Table 1). The lowest FF for which a call was made was 3%. Five (1%) of 511 cases were found to have a FF below threshold (2.8%). Redraws were received in 3 of 5 cases with low FF; however, a call on redraw could be made only in one (Table 4). The FF was directly proportional to gestational age and inversely proportional to maternal weight (Fig. 4).

Fig. 4.

Fig. 4

Comparison of fetal fraction with gestational age and maternal weight. Fetal fraction of cfDNA is plotted against gestational age (weeks) and maternal weight (n = 445) in kilograms A: Thick line with in box plot represents mean fetal fraction of each bin. Box plot representing quartile 2 and quartile 4, i.e., with in 25th and 75th percentile and outer hash marks representing lower and upper data. Total number of NIPT study subjects, 511. a Small dip was observed at weeks 19–20 which could be explained by the smaller sample size in this cohort. b Percentile of subjects with respect to each bin mentioned above the outer hash mark. Solid black line in each box is the average fetal fraction of that group. Outliers are represented as dark color dots next to hash marks of each bin

No-call

The overall no-call rate was 2.3% (12/511). This was defined as no result on the original sample (when no redraw is received) or on a redraw. Redraws were received in only 3 of the 11 samples, which were no-calls again (Table 4).

Ethnicity

Information was available in 453 (88.6%) of 511 samples confirming that the sample cohort consisted of pregnant women of Indian origin.

Consanguinity

Of 511 samples, consanguinity information was available in 479 (93.7%). Of these 17 (3.5%) were consanguineous, and all 17 samples received a call either the regular algorithm or QMM. Only 3 (17.6%) of 17 pregnant women who reported consanguinity yielded an uninformative DNA pattern on initial analysis. All three samples received a definite call by QMM algorithm. No-call due to uninformative DNA pattern was observed in 7 (1.3%) of 511 (all chromosome no-call—5 cases, and no-call on chromosome X—2 cases) samples. Of these, only one (partial no-call) had history of consanguinity and interestingly also screened high risk of trisomy 21. Of the samples with total uninformative DNA pattern, 80% (4/5) could be resolved on QMM algorithm.

Obesity

Obesity (defined as BMI > 30) was observed in 39 (13.9%) of 281 pregnant women. Calls were available in 38 (97.4%) cases on the first draw, of which one was high risk of trisomy 21 (confirmed on invasive testing). Only 2.7% (1/37) did not receive a call on the first run, and a redraw was requested but was not received.

Discussion

Overall, 97.9% samples received a result within 12 days. The good performance in this study is consistent with the overall performance of NIPT [8, 19, 20, 32]. The overall positive predictive value of trisomy 21, trisomy 18, trisomy 13 and monosomy X was 85.7%, which was comparable to previous publication—82.9% for the four aneuploidies [23]. However, the PPV for trisomy 21 was 80%, which was slightly lower than 90.9% in the clinical validation study [20]. If the three unconfirmed high-risk trisomy 21 cases were true positives, the PPV would increase to 84.6%. Nevertheless, this PPV is much higher than the conventional screening methods [8, 33]. The PPV for sex chromosome abnormalities including monosomy X was 75%, which is higher than that published previously—48.4% [34]. It is important to note here that PPV is not intrinsic to the test but depends on the prevalence of the condition in the tested population [35]. An overwhelming number of women (96.6%), intermediate-to-high risk on conventional screening, were low risk on NIPT. Therefore, potentially, these women avoided invasive procedures for aneuploidy confirmation [13]. The high negative predictive value is a significant benefit in terms of reassurance to pregnant women.

The average fetal fraction in Indian pregnant women was 8.3%, which is lower than the average fetal fraction range published in the Western population (10.69%) [11, 19]. These results are, however, consistent with lower fetal fractions in women of South Asian origin between 11 and 14 weeks [36]. This study did not observe negative impact of fetal fractions on NIPT calls in obese women, probably because the degree of obesity observed among Indian women is lower than in the women in other studied population, and mean BMI observed in the no-call cohort was only 27.3 [37]. The no-call rate observed was identical to the no-call rate in the validation study [20]. The no-call rates in other studies ranged between 2.9 and 8.1% [8, 19, 35]. Previous publications and guidelines have indicated that no-calls are likely to be aneuploid [11, 19]. From our no-call cases, a suspected T18 could not be confirmed. In practice, therefore, the decision to resample or proceed to invasive testing, given a no-call result, should be made based on reason for the no-call, the original fetal fraction, the probability of receiving a result on a redraw, established guidelines and the applicable regulations of prenatal testing.

Genetic counseling is mandatory, as recommended by several professional societies [27]. In the present study, a fetus with confirmed 47, XXX, was continued to term after counseling, and the baby is doing well postnatally. All other confirmed high-risk pregnancies were terminated. Unfortunately, two cases high risk on NIPT were terminated without confirmation. This undesirable outcome observed in other studies too remains a challenge [20].

Although consanguinity is cited as one of the reasons for inability to make a call in the SNP-based NIPT [21], it did not impact the current study. Limitations of the study were the small sample size, a biased cohort, as samples were preselected and a lack of complete follow-up (follow-up information was received in 93.3% subjects) and the inability to determine the cause of false positives.

Indian Council of Medical Research recommends genetic screening services to all pregnant women in the National and Family Welfare Program [38]. NIPT, in view of its strong performance in the Indian scenario, safety, accuracy and its easy extension to peripheral areas would be a valuable addition to the prenatal screening program, once the cost comes down. The experience gained in this study has enabled us to consider the implications and suggest modifications to international guidelines before applying these to India [39]. Currently, NIPT may be used in cases with high-risk results on conventional screening to avoid unnecessary invasive tests. Further reduction in cost and greater awareness would provide the benefits of this remarkable technology more widely.

Ishwar Chander Verma

Serves as the HOD in the Department of Centre of Medical Genetics, Sir Ganga Ram Hospital, New Delhi. He has an experience of 51 years in the field of genetics and added valuable contribution in the field of pediatric genetics and community health in India. He handled approximately 2000 cases with expertise in Fetal Medicine and Reproductive Genetics. Current areas of interest and/or active clinical practices: Management of fetal medicine and reproductive genetics; Dysmorphology; Genetic counseling and prenatal diagnosis using molecular, cytogenetic and biochemical techniques. Official certifications/recognition: Holds Genetics training in UK, USA and Switzerland; Member of Fellow of the Royal College of Physicians (FRCP), London, the American Academy of Pediatrics (FAAP) and the National Academy of Medical Sciences (FAMS), New Delhi; Awarded as Ranbaxy Science Award, the Indian Council of Medical Research (ICMR) award, the National Academy of Medical Sciences (NAMS) award and Dr B C Roy (Medical Council of India) National Awards; Mentioned in the Limca Book of Records 2003 as a pioneer in genetics in India.graphic file with name 13224_2017_1061_Figa_HTML.jpg

Conflict of interest

Authors Dr. Ramprasad VL, Dr. Priya Kadam, Dr. Venkataswamy E, Shruti Lingaiah, Riyaz Akhtar, Francis Kidangan, Chandran R., Kiran C., and Ravi Kumar G. R. were/are employed with Medgenome Laboratories Private Limited during the course of the project.

Ethical approval

The study was reviewed and approved by ethical review board of the institutions that participated in the study. All procedures performed in studies involving human participants were in accordance with the ethical standards of the institutional and/or national research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards.

Informed Consent

Informed consent was obtained from all individual participants included in the study.

Footnotes

Prof. I.C. Verma is the HOD in the Department of Centre of Medical Genetics Sir Ganga Ram Hospital, New Delhi, India; Ratna Puri is Professor and Chairperson, Institute of Medical Genetic and Genomics, Sir Ganga Ram Hospital, New Delhi, India; Eswarachary Venkataswamy is Associate Director Q&A, Medgenome Labs Pvt. Ltd, Bengaluru, India; Tulika Tayal is Maternal and Fetal Medical Consultant, Rainbow Hospital, Hyderabad, India; Sheela Nampoorthiri is Clinical Professor, Department of Paediatric Genetics, Amrita Institute of Medical Sciences and Research Center, Kochi, India; Chitra Andrew is Senior Consultant, Obstetrics and Gynecology, Sri Ramachandra Medical College, Chennai, India; Madhulika Kabra is Additional Professor and Officer-in-Charge, Genetic Unit, All India Institute of Medical Sciences, New Delhi, India; Rashmi Bagga is Professor, Obstetrics and Gynecology, Postgraduate Institute and Medical Research Center, Chandigarh, India; Mamatha Gowda is Assistant Professor, Obstetrics and Gynecology, Jawaharlal Nehru Institute of Postgraduate Medical Education and Research, Pondicherry, India; Meenu Batra is Consultant Radiologist, Feto-maternal Medicine, CIMAR Fertility Center, Kochi, India; Sridevi Hegde is Head, Department of Medical Genetics, Manipal Hospital, Bengaluru, India; Anita Kaul is Senior Consultant and Coordinator, Indraprastha Apollo Hospital, New Delhi, India; Neerja Gupta is Assistant Professor, Division of Genetics, All India Institute of Medical Sciences, New Delhi, India; Pallavi Mishra is Biochemist, All India Institute of Medical Sciences, New Delhi, India; Jayshree Ganapathi Subramanian is NIPT Project Coordinator, Sir Ganga Ram Hospital, New Delhi, India; Shruti Lingaiah is Senior Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Riyaz Akhtar is Senior Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Francis Kidangan is Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Chandran R. is Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Kiran C is Senior Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Ravi Kumar GR is Research Associate, Medgenome Labs Pvt. Ltd, Bengaluru, India; Ramprasad V.L. is the Chief Operating Officer, Medgenome Labs Pvt. Ltd, Bengaluru, India; Priya Kadam is NIPT Project Director, Medgenome Labs Pvt. Ltd, Bengaluru, India.

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