Abstract
Herpes simplex virus type-1 (HSV-1) causes recurrent mucocutaneous lesions in the eye that may advance to corneal blindness. Nucleoside analogs exemplified by acyclovir (ACV) form the primary class of anti-herpetic drugs but this class suffers limitations due to the emergence of viral resistance and other side effects. While studying the molecular basis of ocular HSV-1 infection, we observed that BX795, a commonly used inhibitor of TANK-binding kinase-1 (TBK1), strongly suppressed infection by multiple strains of HSV-1 in transformed and primary human cells, cultured human and animal corneas, and a murine model of ocular infection. Our investigations revealed that the antiviral activity of BX795 relies on targeting Akt phosphorylation in infected cells leading to the blockage of viral protein synthesis. This small molecule inhibitor, which could also be effective against ACV-resistant HSV-1 strains, shows promise as an alternative to existing drugs and as an effective topical therapy for ocular herpes infection. Collectively, our results obtained using multiple infection models and virus strains establish BX795 as a promising lead compound for broad-spectrum antiviral applications in humans.
One sentence summary:
A kinase inhibitor shows promise as a topical antiviral against ocular herpes.
Introduction
Herpes simplex virus type-1 (HSV-1) is among the most common human pathogens, with worldwide prevalence estimated to be in the range of 50–90% (1). It is primarily known to cause orofacial and ocular diseases; however, HSV-1 related genital cases are increasingly reported (2). The virus establishes a lifelong latent infection in the trigeminal ganglia (TG), and recurrent infection leads to complications including vision loss and lethal meningoencephalitis (3). Advanced HSV-1 corneal infection represents the leading cause of infectious blindness, while and virus dissemination to the nervous system may cause lethal meningoencephalitis (3, 4). Acyclovir (ACV) and its analogs are the primary treatment options available for ocular herpes. ACV, Valacyclovir, and Famciclovir are usually administered systemically and Trifluridine (trifluorothymidine) (TFT) and Ganciclovir gel are applied administered topically (5)(6). Although ACV and its analogs have been effective in controlling infection, they suffer from many limitations: (i) as nucleoside analogs they rely on blocking viral DNA duplication and do not act directly to prevent viral protein synthesis (7), (ii) cases of drug resistance including escape mutants are frequently reported (8–12), (iii) prolonged use of TFT can cause other ocular disorders (13–15) and prolonged use of ACV can cause nephrotoxicity (16–18), and (iv) nucleoside analogs have the potential to be a chromosomal mutagen and therefore, often are not prescribed during pregnancy (19). Therefore, there is an imminent need to develop new treatment options with alternative mechanisms of antiviral action (12).
In this study, our findings reveal a promising role of BX795 as an antiviral agent against HSV-1 infection. BX795 is a well-studied inhibitor of TANK-binding kinase 1 (TBK1) (20). TBK1 is one of two IκB kinase related homologs known to play key roles in regulating innate immunity, neuroinflammation, autophagy, cell survival, and cellular transformation (21–24). During HSV-1 infection a virus-encoded neurovirulence factor, γ134.5, blocks the activation of TBK1 and its downstream targets, such as interferon regulatory factors (IRFs) to inhibit the type-I interferon pathway and promote viral replication (25, 26). Given the broad significance of TBK1 in the host antiviral response it is expected that blocking TBK1 activity via an inhibitor should further reduce host response and enhance infection (20, 25, 26). However, in this study, we demonstrate that BX795suppresses HSV-1 protein synthesis in various infection models, and highlights BX795 as a promising non-nucleoside alternative to current antiviral drugs against HSV-1 and potentially other viruses.
Results
BX795 suppresses HSV-1 infection in human corneal epithelial cells.
Originally we sought to inhibit the activity of TBK1 via the use of BX795 to address the importance of TBK1 and autophagy in HSV-1 infection. A human corneal epithelial (HCE) cell line was infected with HSV-1-tagged red fluorescent protein (RFP) virus (K26RFP) and treated with different concentrations of BX795 and viral yields were quantitated using flow cytometry and qPCR. To our surprise, we observed a dose-dependent inhibition of infection by BX795 (Figures 1A & 1B) and suppression of viral titers in culture supernatants (Supplementary Figure 1A). Our unexpected findings prompted us to thoroughly investigate the anti-herpetic potential of BX795. From the dose-response curves, BX795 displayed maximum antiviral activity at 10 μM and an IC50 value of 5.0 ±0.5 μM. Using two different initial viral inoculums, and TFT as a positive control, the inhibitory effect of BX795 on green fluorescent protein (GFP) tagged-HSV-1 (K26GFP) infection was monitored by additional assays, which included fluorescence microscopy (Figures 1C), qRT-PCR analysis of viral transcripts (Figure 1D), western blot analysis of a key viral protein (Figure 1E), and a viral plaque analysis to quantify secreted virions (Supplementary Figure 1B). In all cases, BX795 demonstrated inhibition of HSV-1 infection and was comparable to the antiviral activity exhibited by TFT. The unexpected antiviral effect was consistently seen even with additional cell lines of non-human origin (Supplementary Figure 1C). Collectively, we found that BX795 effectively inhibits HSV-1 infection at different viral inoculums.
Next, we compared the antiviral efficacy of BX795 with that of ACV, Famciclovir, Ganciclovir, and Penciclovir. Using 10 μM as a standard concentration we found that BX795 showed a higher suppression of infection compared to most other treatments as determined by fluorescence microscopy (Supplementary Figure 2A) and flow cytometry (Supplementary Figure 2B). Our additional dose analysis experiments demonstrated that 5-fold higher concentrations of nucleoside analogs were required to achieve a similar antiviral efficacy to BX795 at 10 μM. One exception was Famciclovir, which did not reach similar efficacy even at 50 μM concentration (Supplementary Figure 2B). Interestingly, unlike nucleoside analogs, the antiviral activity of BX795 was also strong against an ACV-resistant strain, HSV-1 (KOS)tk12. This strain lacks the thymidine kinase gene and therefore, does not respond to ACV treatment (27). HCE cells that were infected with HSV-1 (KOS)tk12 and treated with BX795 showed very little expression of HSV-1 gB indicating inhibition of infection (Supplementary Figure 2C). In contrast, ACV or mock treatment did not result in a measurable loss of gB. Taken together these data suggest that BX795 treatment achieves higher efficacy at a lower dose than existing anti-herpesvirus therapies and it could be effectively used against an ACV-resistant strain as well.
Therapeutic concentration of BX795 does not cause toxicity in cells.
Antiviral effects of a drug should not be accompanied by any adverse toxicity issues Therefore, we tested whether BX795 treatment induces apoptosis or cell death in HCE cells. Using an Annexin V - PI apoptosis assay, we found no adverse effect of BX795 on apoptotic cell percentages (Figure 2A, numbers highlighted in bold). We also visually assessed cell morphology by bright-field imaging and tested viability with a standard cytotoxicity assay (3-(4,5-Dimethylthiazol-2-yl)-2,5-Diphenyltetrazolium Bromide, MTT). Images (Supplementary Figure 3A) and MTT assay (Supplementary Figure 3B) showed no adverse cytotoxicity at most concentrations tested, which included the proposed therapeutic concentration (10 μM) of BX795. As a control, TFT was included for cytotoxicity evaluation and we did not observe changes in apoptotic percentages of cells (Figure 2A) or viability (Supplementary Figure 3C) when HCE cells were incubated with TFT.
MTT assay revealed that the infected and BX795-treated cells were healthy and viable compared to the mock-treated cells (Figure 2B). Upon further probing, we found that most of the kinases in the mitogen-activated protein kinase (MAPK) pathway, an essential pathway in cell survival (28, 29), were upregulated in the cells that were infected and treated with BX795 compared to the mock treatment (Figures 2C & 2D). Normalization of the phosphorylation levels of different kinases in the BX795-treated cells to the mock-treated cells revealed that p38 (p<0.05) and RSK1 (p<0.001) kinases were significantly upregulated whereas GSK3a (p<0.05) kinase was downregulated (Figure 2E). These results collectively indicate that BX795 treatment does not adversely affect cell survival in infected cells.
BX795 demonstrates its antiviral action by inhibiting Akt phosphorylation.
After characterizing the antiviral potential of BX795, we proceeded to identify the mechanism by which BX795 achieves its antiviral activity. It appeared to be TBK1-independent since BX795 also blocked infection in the TBK1 knockout mouse embryonic fibroblasts (MEFs) (Supplementary Figure 4A). However, the antiviral activity of BX795 was stronger especially at 10 μM in the wild-type compared to the TBK1 knockout cells, which could possibly arise due to the differences in the levels of interferon production. To determine whether BX795 differentially affected the interferon production in the two cell types, we performed qRT-PCR to evaluate IFN-α and IFN-β transcripts. Although no differences in the production of transcripts were observed in the non-treated cells, a difference was seen under infection conditions where both BX795-treated wild-type as well as TBK1 knockout cells produced significantly (p<0.0001) lower amounts of IFN-α and IFN-β transcripts compared to the mock-treated cells. However, no differences were evident when BX795-treated wild-type or knockout cells were compared with each other (Supplementary Figure 4B) indicating that some unknown interferon-independent factors may contribute to the differences in the antiviral activity between the two cell types.
To identify the stage of HSV-1 lifecycle and the target molecule that is affected by BX795, we pursued a stepwise approach. Genome quantification of infected cells that received the treatments at the time of infection and assayed at 2 hours post-infection (hpi) revealed no differences in viral entry between the mock and BX795-treated cells (Figure 3A, left panel). Similar results were obtained when the entry of K26GFP virions was analyzed using flow cytometry (Figure 3A, right panel). Next, we focused on tegument protein delivery to the nucleus. Synthesis of HSV-1 genes intermediate early (IE), early (E) and late (L) occurs sequentially in a cascade to make new progenies. The cascade begins when the viral tegument protein VP16 drives the expression of IE genes (30–32). We, therefore, determined the expression of VP16 protein at different times post-infection in the mock and BX795-treated infected cells. At 2 hpi, the expression of VP16 protein was similar in the cytoplasmic and nuclear fractions, suggesting that tegument protein delivery is not affected by BX795. However, as infection progressed, immunoblots of these cellular fractions revealed lower levels of VP16 expression in the BX795-treated cells (Figure 3B) raising a possibility that BX795 could be blocking viral protein synthesis. This possibility was assessed by confocal imaging where we observed similar amounts of incoming virions in the mock and BX795-treated cells at 3 hpi (Figure 3C, 3 hpi), but as infection progressed, newly generated viral capsids were observed in the mock-treated but not in the BX795-treated cells (Figure 3C, 6 hpi). In addition, we made use of a dual color HSV-1 reporter virus (KOS) pEGFP-ICP0/pRFP-gC that expresses EGFP and RFP from the viral genome. EGFP can be seen very early during infection since it is expressed through an IE gene promoter (infected cell protein 0, ICP0) whereas RFP is observed much later because it is expressed through a late gene promoter (glycoprotein C) (33). HCE cells treated with BX795 showed very little EGFP and no RFP, suggesting that viral protein synthesis stops soon after the addition of the drug (Figure 3D). In contrast, the mock-treated cells showed both EGFP and RFP expression. Taken together, the above-mentioned results strongly suggest that BX795 interferes with viral protein synthesis.
Since we had evidence that synthesis of viral proteins including IE proteins was inhibited upon treatment (Figure 3D), we reasoned that BX795 could target a host molecule that is needed for the initiation of HSV-1 protein synthesis. Evidence suggests that HSV-1 induces protein kinase B (PKB) or Akt to manipulate host cell function (34–36)and that HSV-1 Us3 kinase is an Akt mimetic that activates mTORC1 to stimulate viral protein synthesis (37, 38). On this basis, we decided to pursue Akt as a host molecular target for BX795. This possibility was further supported by our observation that blocking Akt activity using an Akt inhibitor (AZD5363) resulted in the loss of VP16 protein expression (Supplementary Figure 4C). To understand this further, the phosphorylation status of Akt was monitored at different times post-infection. We observed that BX795 treatment blocked the phosphorylation of Akt at Ser473 (pSer473) only in the infected cells but, for reasons unclear, it did not have an impact on the non-infected cells (Figure 3E). We performed immunofluorescence imaging that confirmed our immunoblot findings that little or no p-Akt-Ser473 was found in cells infected and treated with BX795 (Figure 3F). Additionally, we performed a time course study to determine the phosphorylation status of the downstream effector of Akt involved in protein synthesis: eukaryotic translation initiation factor (eIF) 4E-binding protein 1 (4E-BP1). It is known that 4E-BP1 is hyperphosphorylated upon HSV-1 infection and then degraded causing uninterrupted protein synthesis and thus allowing generation of more virions (34, 37, 39). In the mock-treated cells, HSV-1 infection induced hyperphosphorylation (γ band) of 4E-BP1 over time whereas in cells treated with BX795 these bands were not observed (Figure 3G). This indicates that blocking Akt activity via BX795 prevents the hyperphosphorylation of 4E-BP1 thus resulting in little to no new virions.
Because BX795 and the existing antivirals work on two separate targets to block HSV-1 infection, we next tested the synergistic ability of BX795 and TFT to block infection. We first evaluated the toxicity of the drug combination on HCE cells. MTT assay on HCE cells incubated with the drugs showed no toxicity at 60 μM or lower concentrations (Supplementary Figure 4D). Next, the synergism of the drugs to block HSV-1 infection was tested by monitoring GFP levels from HSV-1 tagged GFP virus using flow cytometry. We observed a dose-response relationship when the cells were infected and treated with TFT. Interestingly, when BX795 and TFT were given together as a cocktail at concentrations lower than their individual most effective concentrations (10 μM and 50 μM respectively) we saw a lower inhibition of infection except at the highest concentrations of BX795 and TFT, but little to no synergy was evident (Supplementary Figure 4E).
Topical application of BX795 suppresses corneal HSV-1 infection in a mouse model.
Having established the antiviral effects of BX795 in vitro, we then sought to investigate the effect of BX795 as a potential topical antiviral against HSV-1 infection in vivo. We compared the antiviral potency of BX795 to mock treatment (DMSO) and TFT, the only topically administered drug currently prescribed to treat ocular herpes infection. BX795 was used at its therapeutic concentration - 10 μM and TFT at its clinically prescribed dose - 1% solution (~34mM) (6). To determine infectivity, we visually assessed the infected eye of all the treated mice. The mock-treated eye showed signs of ocular infection at day 3 post-infection and the symptoms worsened by day 7 (Figure 4A). In contrast, the BX795 and TFT-treated eyes were healthy (Figure 4A). To rule out the possibility that topical application of the treatments was causing distress to the eye, the left eyes of these mice, which received the topical treatments but no virus, were imaged. We did not observe any visible signs of infection or ocular distress confirming that the treatments did not impart any toxicity to the eyes (Supplementary Figure 5A). We assayed the secreted virus titers from the tears at two different days post-infection (dpi). Both BX795 and TFT treatments significantly (p<0.01) reduced the viral titers present in the eye (Figure 4B). We also performed histological staining to examine the pathology of the eye. The mock-treated tissues presented with loss of cells in the corneal epithelium and epithelial thickening typical of acute infection (Figure 4C, 4D). After active infection in the eye, HSV-1 travels to the trigeminal ganglia (TG) where it establishes latency after primary infection. To assess whether BX795 treatment blocked the transmission of HSV-1 to the TG, TGs from the infected mice were harvested and assayed to evaluate the number of HSV-1 genomes and viral titers. The BX795 and TFT-treated mice had significantly (p<0.05) fewer HSV-1 genomes (Figure 4E, left panel) and titers (Figure 4E, right panel) present in the TG compared to the mock-treated mice indicating that the treatments block the transmission of the virus to the TG from the active site of infection. Survival curves were generated for each treatment group to assess the effect of the treatments. A significant (p<0.05) difference was observed in the number of survivors between the BX795 and mock-treated mice (Figure 5A). Loss of corneal sensation has been implicated as an important pathology associated with ocular HSV-1 infection (40, 41), so we assessed corneal sensitivity by recording esthesiometer scores at two different dpi, where higher scores indicate a loss in corneal sensitivity. The BX795-treated mice showed significantly (p<0.05) less or no loss of sensation compared to the mock-treated mice (Figure 5B). The TFT-treated mice also showed better corneal sensitivity compared to the mock-treated mice (Figure 5B). Clinical signs of acute ocular herpes infection were also monitored and scored in a blinded fashion. Mice that were treated with BX795 had significantly (p<0.05) lower disease scores compared to the mock–treated mice at days 3, 4 and 7 dpi (Figure 5C). The TFT-treated mice also presented fewer symptoms compared to the mock treatment but the symptoms were marginally pronounced compared to the BX795 treatment (Figure 5C). The disease scores were further analyzed to observe whether the effect of treatments was influenced by the gender of the mice. No significant gender differences were observed among the treatments although cumulative disease scores at 7 dpi indicate that around 56% males and 44% females presented eye disease symptoms in mock and TFT-treated mice respectively whereas equal numbers of male and female mice presented eye disease symptoms with BX795 treatment. Finally, body weights were recorded at different dpi. Among the female mice, the BX795 and TFT-treated mice did not show significant loss of weights compared to the mock-treated mice (Figure 5D, left panel). However, among the male mice, only at 7 dpi, we observed a significant loss (p<0.05) of body weight in the mock-treated compared to the BX795-treated mice over time (Figure 5D, right panel). Collectively, data from these experiments indicate that compared to the mock-treated mice, the BX795-treated mice were healthier and resist infection. In addition, the health of the BX795-treated mice was equal or marginally better compared to the TFT-treated mice although the drugs were used at different concentrations.
BX795 blocks HSV-1 infection in human primary cells and ex vivo human and porcine corneas.
Finally, we investigated the antiviral potential of BX795 in primary human corneal cells and human cornea buttons, which were obtained from tissue banks. The results were consistent with our earlier in vitro results, (Figure 6A). Two interesting observations were noted: (i) BX795 at 5 μM also showed significant antiviral activity and (ii) the IC50 from the dose-response curve was estimated to be ~2.8 μM which is lower than the IC50 we observed in HCE cell lines. Additionally, BX795 did not adversely affect the viability of primary cells at its therapeutic concentration (Figure 6B). We then transitioned to organ cultures of the human corneas. A single human cornea was divided into two halves and each half was infected and treated with either mock or BX795. Immunofluorescence imaging with the tissue sections at 48 hpi revealed that BX795-treated corneal sections significantly suppressed infection compared to the mock-treated sections (Figures 6C & 6D). In parallel, to account for human variability and the possibility that a drug may show varied efficacy in different individuals, random groups of corneas were infected and treated. Infection was assessed by determining the viral genome and viral protein levels. In concurrence with our previous results, the corneas treated with BX795 showed loss of infection (Figures 6E & 6F). Providing additional support, similar antiviral effects of BX795 were seen against two other highly pathogenic strains of HSV-1 (Figures 6G & 6H). In parallel, we also used a porcine cornea culture model to determine the antiviral activity of BX795 (42–44). Consistent with our findings, BX795 treatment blocked HSV-1 infection in porcine corneas as seen from representative immunofluorescence images (Supplementary Figure 5B), immunoblot and HSV-1 protein levels (Supplementary Figures 5C & 5D). These data further elucidate the promise of BX795 as a therapeutic agent against HSV-1 infection in diverse models of infection.
Discussion
Our study demonstrated the antiviral activity of a kinase inhibitor, BX795, in inhibiting HSV-1 infection. Using several different infection models, we observed that BX795 was highly effective in reducing HSV-1 infection and the levels of antiviral activity were similar to TFT, a currently prescribed topical antiviral for ocular herpes. At its therapeutic concentration, we show that BX795 does not induce any adverse toxicity to cells. The role of p38 in cell survival is well-documented and evidence suggests that inhibiting Akt allows p38 to promote cell survival (45, 46), which may be the case in our study as we show that BX795 blocks Akt activity. RSK1 also regulates cell survival (47) and downregulates the ubiquitin-conjugating enzyme E2 R1 (48). ICP0, encoded in the HSV-1 genome, is an E3 ubiquitin ligase that requires the E2 enzyme to perform various roles in HSV-1 infection including the efficient establishment of infection (49). It is thus possible that upregulation of RSK1 with BX795 treatment results in the downregulation of E2 activity that prevents ICP0 from performing the necessary proviral activities. GSK3a was the only kinase downregulated upon BX795 treatment which is consistent with previous findings that inhibiting GSK3a activity results in a pro-survival signaling (50, 51). In addition, mice that received topical BX795 treatment in the eye showed no adverse effects or detectable toxicity.
We show that BX795 targets Akt to block viral protein synthesis. Akt can regulate protein synthesis by controlling the activity of mammalian target of rapamycin complex 1 (mTORC1) and its downstream effectors 4E-BP1 and S6K (52–55). HSV-1 is known to activate the Akt pathway to manipulate protein synthesis in addition to aiding in viral entry, replication, and reactivation (56, 57). We provide evidence that BX795 reduces phosphorylation of Akt at Ser473 and prevents hyperphosphorylation of 4E-BP1 in infected cells thus blocking viral protein synthesis. BX795 is an inhibitor of TBK1 and can also inhibit 3-phosphoinositide-dependent kinase 1 (PDK1) (20). Both these kinases are known to phosphorylate Akt (58). During the time our work was in progress, a published study demonstrated anti-HSV activity of BX795 and found it to be independent of TBK1 and PDK1 (59) and we also found in this study that BX795 can function independent of TBK1. Thus, whether BX795 affects Akt directly or indirectly is unclear.
Despite having a unique mode of antiviral action, it was evident that BX795 and TFT together do not show synergism. This finding was surprising since both the drugs act on two separate targets and was expected to show synergism. An explanation for lack of synergism includes the possibility that the action of both BX795 and TFT depends heavily on a threshold concentration. A minimum overall concentration of BX795 may be needed before it demonstrates its lower affinity off-target antiviral effect. Nevertheless, BX795 may have attributes of a broad-spectrum antiviral since many other viruses are known to subvert the host protein synthesis machinery via Akt (60, 61). Since it targets a host molecule, any long-term toxicity associated with BX795 treatment remains unclear. Likewise, systemic delivery of BX795 was not tested, and it is likely to have its own benefits and limitations.
In conclusion, our study characterizes the antiviral activity of BX795. It reduces infection via a mechanism that is distinct from the conventional antivirals currently available against HSV-1. BX795 could represent an emerging class of small molecule antiviral compounds which may potentially act against multiple human viruses that use Akt for their pathogenesis (60, 61). It is thus worthy of further investigation and future development as an effective inhibitor of infection and potentially a broad-spectrum antiviral drug.
Materials and Methods
Study Design
The objective of this study was to characterize the unexpected antiviral activity of a small molecule kinase inhibitor BX795. The antiviral activity and drug toxicity were determined and confirmed in vitro using human corneal epithelial (HCE) cells that are natural target cells for HSV-1 infection. BX795 was further compared to existing front-line antiherpetic treatments to demonstrate its efficacy and its potential synergism with trifluridine (TFT) was also evaluated. The mechanism of antiviral action was assessed by a step-wise approach using flow cytometry, immunofluorescence and immunoblotting in non-infected and infected cells. The antiviral activity of BX795 was compared to TFT in the mouse models of corneal HSV-1 infection by topically administering the drugs and monitoring the infection and associated pathologies. Finally, using porcine and human cornea organ cultures, the antiviral activity of BX795 was assessed to highlight the BX795’s promise as a lead compound for future translational research. The animals and ex vivo corneas were randomly assigned to the treatment groups. Ocular disease scoring and sample analysis was conducted in a blinded fashion. Primary data are located in table S1.
Statistical Analysis:
The data shown in figures are means ± standard error of means (SEM). The statistical tests were performed on GraphPad Prism version 6.01 (GraphPad Software) and are described in each figure legend. Dose-response curves were also generated using GraphPad Prism. Asterisks indicate significant difference: *p<0.05, **p<0.01, ***p<0.001 and ****p<0.0001.
Supplementary Material
Acknowledgements:
We thank Dr. Ali Djalilian (UIC) for help with obtaining the human corneas and primary HCE cells Dr. Balaji Ganesh and Dr. Suresh Ramasamy (Flow Cytometry Services, UIC) for helping us with acquiring and analyzing the apoptosis data and Dr. Paul R. Kinchington (University of Pittsburgh) for providing the dual fluorescent virus.
Funding: This work was supported by a grant from the National Eye Institute (R01 EY024710) to DS
Footnotes
Competing interests: The authors claim no conflicts of interest.
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