FOXP3 and CTLA-4 genetic variants' influence on the susceptibility and clinical course of basal cell carcinoma

Abstract

Introduction

The pathogenesis of basal cell carcinoma (BCC) is multifactorial and not fully elucidated. Previous studies showed that behaviour of the tumour may be influenced by the immune system and identified CD4⁺CD25⁺FoxP3⁺ regulatory T cells (T_regs) as dominant immune cells in BCC microenvironment. The function and development of Tregs is regulated by FOXP3, encoding transcription factor Forkhead box P3. FOXP3 regulates transcription of many genes, including up-regulation of cytotoxic lymphocyte-associated antigen-4 gene (CTLA-4). Expressed on Tregs, CTLA-4 interacts with antigen-presenting cells to inhibit T-cell activation.

Aim

To investigate the role of two polymorphisms (rs3761548 and rs2232365) of FOXP3 and CTLA-4 polymorphism (rs5742909) in BCC patients from northern Poland.

Material and methods

We analysed 280 unrelated patients with BCC of mean age 70.93 ±11.53 (70.54 ±12.55 women, 71.38 ±10.26 men) and 200 healthy, unrelated age- and sex-matched volunteers.

Results

The differences in the occurrence of BCC between genotypes and alleles of the analysed polymorphisms were not statistically significant. In the studied group, the presence of the CC genotype in CTLA-4 rs5742909 polymorphism was statistically more frequent in patients with multiple BCCs.

Conclusions

It seems that the analysed FOXP3 and CTLA-4 polymorphisms do not influence the BCC susceptibility. CTLA-4 rs5742909 polymorphism may influence the susceptibility to multiple BCCs.

Introduction

The pathogenesis of basal cell carcinoma (BCC) is multifactorial and not fully elucidated. Previous studies showed that behaviour of the tumour may be influenced by the immune system and identified CD4⁺CD25⁺FoxP3⁺ regulatory T cells (T_regs) as dominant immune cells in BCC microenvironment [1–3]. It is known that different types of human cancer are able to recruit immune cells to the tumour site to promote escape from host immune surveillance. After recruitment from peripheral blood, T_regs play a key role in the suppression of anti-tumour immunity [4]. The function and development of T_regs is regulated by FOXP3 encoding transcription factor, Forkhead box P3 (FoxP3). FoxP3 regulates transcription of many genes, including up-regulation of cytotoxic lymphocyte-associated antigen-4 gene (CTLA-4) [5], Expressed on T_regs, CTLA-4 interacts with antigen-presenting cells to inhibit T-cell activation [6].

Polymorphisms of FOXP3 and CTLA-4 may change their role functionally or quantitatively, therefore leading to an altered function of T_regs [7]. The role of single nucleotide polymorphisms (SNPs) of these genes has been previously investigated in different human neoplasia [8,9]. To our knowledge, none of the previous studies investigated the role of FOXP3 polymorphisms in BCC, while only one study concerned the role of CTLA-4 variants in the tumour development [6].

Aim

The aim of the study was to investigate the role of two polymorphisms (rs3761548 and rs2232365) of FOXP3 and CTLA-4 polymorphism (rs5742909) in BCC patients from northern Poland.

Material and methods

Patients and controls

The study included 280 unrelated patients with BCC of mean age 70.93 ±11.53 (70.54 ±12.55 women, 71.38±10.26 men) and 200 healthy, unrelated age- and sex-matched volunteers. Clinical characteristics of the study group are presented in Table 1. Patients were treated due to primary or recurrent BCC in the Department of Dermatology, Venereology and Allergology, Medical University of Gdansk, Poland. Histopathological diagnoses were made based on the assessment of the haematoxylin and eosin stained sections, according to the classification system of the World Health Organization (WHO) [10]. SNPs were chosen based on their previously documented significance in other neoplasia, on their functional relevance, as well as on the minor allele frequency MAF ≥ 0.1 in the Caucasian population (https:// www.ncbi.nlm.nih.gov/snp/). Clinical data were collected based on medical records. None of the subjects were organ transplant recipients, none were being treated with immunosuppressive drugs, none suffered from any systemic inflammatory disease or malignancy, none had the signs of infection. The blood samples were collected after obtaining patients’ informed consent, before the surgical procedure. The status of “multiple BCC” was assigned based on previous medical records, medical history or more than one tumour detected during physical examination on hospital admission. Patients with multiple tumours were evaluated for the clinical and radiological signs of Gorlin-Goltz syndrome and, if necessary, referred to further genetic assessment. Patients with confirmed diagnosis of Gorlin-Goltz syndrome were excluded from the study. Skin surface in anatomical regions considered as chronically exposed to sunlight, namely the face, top of the ears, back of the neck, dorsum of the hands and forearms was classified as “area exposed to UV”. All subjects were exclusively of Polish descent. The study was approved by the local research ethics committee of the Medical University of Gdansk.

Table 1.

Characteristics of the study group – BCC patients

Parameter	Males	Females	Overall group
N (%)	132 (47.1)	148 (52.9)	280
Age, mean ± SD [years]:
< 60	54.95 ±5.12	52.32 ±5.33	53.22 ±5.37
> 60	74.29 ±7.92	76.52 ±7.40	75.42 ±7.73
Tumour size [cm]	1.37 ±0.84	2.18 ±8.85	1.8 ±6.47
Diagnosis:
BCC	125 (47.7%)	137 (52.3%)	262
BCC recurrence	7 (38.9%)	11 (61.1%)	18
Number of tumours:
One tumour	74 (41.1%)	106 (58.9%)	180
Multiple tumours	58 (58.0%)	42 (42.0%)	100
Location:
Area exposed to UV	105 (44.9%)	129 (55.1%)	234
Area not exposed to   UV	27 (58.7%)	19 (41.3%)	46

CTLA-4 and FOXP3 genotyping

DNA from the peripheral blood of BCC patients and volunteers was isolated by Blood Mini A&A Biotechnology (A&A Biotechnology, Gdansk, Poland). FOXP3 rs3761548 and rs2232365 polymorphisms and CTLA-4 rs5742909 polymorphism were analysed using polymerase chain reaction with sequence-specific primers (SSP-PCR) [11, 12].

Ethical disclosure

The study was approved by the local ethics committee of the Medical University of Gdansk.

Statistical analysis

The χ² analysis was used to compare the observed number of genotypes with that expected for a population in a Hardy-Weinberg equilibrium. The χ² analysis was also employed to test the significance of the differences in the observed alleles and genotypes between groups. The Mann-Whitney U test was used to compare the mean values. Due to the fact that FOXP3 is located on the X-chromosome, the analysis was stratified for gender. The strength of associations between rs3761548 and rs2232365 FOXP3 polymorphisms and rs5742909 CTLA-4 polymorphism and BCC risk was assessed in the allelic model, as well as the genotype recessive model, dominant model, and overdominant model (Tables 2, 3).

Table 2.

Genotypes and alleles frequencies for FOXP3 rs3761548 and rs2232365 in BCC patients and controls

SNP	BCC group		Control group		P-value
	Females	Males	Females	Males
rs3761548:
Recessive model:					0.97
AA	34 (23.0%)		23 (22.8%)
CA + CC	114 (77.0%)		78 (77.2%)
Dominant model:					0.17
AA + CA	87 (58.8%)		68 (67.3%)
CC	61 (41.2%)		33 (32.7%)
Overdominant model:					0.16
CA	53 (35.8%)		45 (44.5%)
CC + AA	95 (64.2%)		56 (55.5%)
C		63 (47.7%)		54 (54.6%)	0.31
A		69 (52.3%)		45 (45.4%)
rs2232365:
Recessive model:					0.25
AA	56 (37.8%)		31 (30.7%)
AG + GG	92 (62.2%)		70 (69.3%)
Dominant model:					0.53
AA + AG	100 (67.6%)		72 (71.3%)
GG	48 (32.4%)		29 (28.7%)
Overdominant model:					0.07
AG	44 (29.7%)		41 (40.6%)
AA + GG	104 (70.3%)		60 (59.4%)
A		68 (51.5%)		52 (52.5%)	0.88
G		64 (48.5%)		47 (47.5%)

Table 3.

Genotype and allele frequencies for CTLA-4 rs5742909 in BCC patients and controls

Genotypes and alleles	BCC group	Control group	P-value
Recessive model:			0.33
TT	6 (2.1%)	2 (1.0%)
CT + CC	274 (97.9%)	198 (99.0%)
Dominant model:			0.78
TT + CT	56 (20.0%)	38 (19.0%)
CC	224 (80.0%)	162 (81.0%)
Overdominant model:			0.97
CT	50 (17.9%)	36 (18.0%)
CC + TT	230 (82.1%	164 (82.0%)
C	498 (88.9%)	360 (90.0%)	0.59
T	62 (11.1%)	40 (10.0%)

Analyses were performed using the Statistica 12.0 software package (StatSoft, Inc., 2010). P≤ 0.05 was considered statistically significant.

Results

FOXP3 polymorphisms

Table 2 shows genotype and allele frequencies for FOXP3 rs3761548 and FOXP3 rs2232365 polymorphisms in BCC patients and controls. Due to the fact that FOXP3 is located on the X-chromosome, the analysis was stratified for gender. The deviation of genotype distribution from Hardy-Weinberg equilibrium was analysed only in women (males carry only one X-chromosome). The distribution of the FOXP3 rs3761548 and FOXP3 rs2232365 in females was consistent with the Hardy-Weinberg equilibrium in the control group and inconsistent within the females from the studied group. No association was observed between SNP alleles and genotypes and BCC risk. In the BCC group there were no statistically significant associations between FOXP3 rs3761548 as well as FOXP3 rs2232365 allele and genotype frequencies and tumour size, location, and number of tumours diagnosed. We have found no statistical differences between the group of patients with primary and recurrent BCC.

CTLA-4 polymorphisms

Table 3 shows genotype and allele frequencies for CTLA-4 rs5742909 polymorphisms in BCC patients and controls. The distribution of the CTLA-4 genotypes was consistent with the Hardy-Weinberg equilibrium both in BCC patients and controls. No association was observed between SNP alleles and genotypes and BCC risk. The presence of the CC genotype in CTLA-4 rs5742909 polymorphism was statistically more frequent in patients with multiple BCCs (p = 0.05). There were no statistically significant associations between CTLA-4 rs5742909 allele and genotype frequencies and tumour size, and location. We have found no statistical differences between the group of patients with primary and recurrent BCC.

Discussion

T_regs have been previously recognized as one of the key elements modulating anti-tumour immunity and involved in the pathogenesis of numerous human neoplasia [1–3]. The population of T_regs, which constitutes about 5% of CD4+ T lymphocytes, is characterized by high-intensity expression of CD25 and involves two main subsets [13]. Naturally occurring T_regs (nTregs) originating in the thymus during the process of negative selection are responsible for maintaining peripheral tolerance. Inducible or adaptive T_regs (iT_regs, Tr1) are induced in the periphery, where features necessary for controlling local immune response are acquired [4]. The latter are known to possess a broader range of suppressor properties, what concerns especially iT_regs isolated from human tumour microenvironment [14]. Initial studies showed that accumulation of T_regs in the tumour site and peripheral blood suppresses anti-tumour response, leading to cancer progression and therefore has been recognized as a marker of poor prognosis. However, recent studies showed that presence of T_regs may also improve prognosis in several inflammation-associated neoplasia [4, 15]. Inhibition of anti-tumour immune response by T_regs is complex and involves several mechanisms like production of suppressive cytokines (IL-10, TGF-β, IL-35), direct cytotoxicity (via perforins/granzyme), immune checkpoints/inhibitory receptors (CTLA-4, PD-1, IDO, TIM-3, ICOS, TIGIT, IDO) and induction of tolerogenic dendritic cells [16]. Development and functioning of T_regs is primarily regulated by the FOXP3 gene, encoding FOXP3 transcription factor, located at the small arm of the X-chromosome (Xp11.23). FOXP3 regulates transcription of numerous target genes, including up-regulation of CTLA-4 (encoding CTLA-4 receptor). CTLA-4 is a molecule constitutively expressed in T_regs and critical for their suppressive function. Accord-ing to Takeuchi and Nishikawa [17], main mechanisms mediated by CTLA-4 involve blocking of B7-CD28 signals through binding to B7 with higher avidity and antigen presenting cells maturation restriction.

Although it is known that CD4+CD25+FoxP3+ regulatory T cells are highly prevalent in BCC microenvironment, their role in the tumour pathogenesis is underinvestigated [1–3]. Chen et al. [18] who examined the effects of UV exposure on FOXP3+ peri-neoplasm cells infiltration in non-melanoma skin cancer (NMSC) have found that they were statistically less prevalent in more pigmented BCCs. The authors hypothesised that pigment is responsible for UV radiation (UVR) obstruction, and thus inhibits the induction of FOXP3+cells. One of the possible pathogenetic pathways that could play a role in UVR-induced FOXP3 expression includes the UVR DNA damage that leads to p53 pathway activation [19]. Previous studies provided also evidence on the role of CTLA-4 in UVR immunosuppression in skin cancer development [6, 20, 21].

Beissert et al. [21] have shown that transgenic mice expressing CTLA-4 antagonist, CTLA-4Ig, developed fewer skin tumours after chronic UVR exposure, compared to their wild-type counterparts. Studies exploring the role of T_regs in BCC provide also important knowledge on its non-surgical treatment methods mechanisms. Imiquimod, a topical drug approved for the treatment of superficial BCC, is a Toll-like receptor 7 agonist which exerts an anti-tumour effect via modification of the immune response, which is associated with the reduction in T_regs population in BCC environment [22]. Nevertheless, the drug may also exert counteracting immunosuppressive effect via inducing T_regs, which may influence its unpredictable treatment effect in thicker tumours [23]. Nomikos et al. [22] have shown that application of cryosurgery during imiquimod treatment (immunocryosurgery) significantly decreases T_regs infiltration, exerting local anti-tumour response. The role of CTLA-4 in BCC may also have a therapeutic significance. Mohan et al. [24] reported a regression of advanced BCC in a patient treated with ipilimumab (anti-CTLA-4 monoclonal antibody) due to concurrent metastatic melanoma. This case report suggests that anti-CTLA-4 antibodies could potentially be used in the treatment of BCC, however further studies are needed to confirm this observation.

A series of FOXP3 polymorphisms located in the promoter, introns and exons have been described [25]. The promoter region polymorphism may influence gene expression and subsequently T_regs function through changing the kinetics of transcription initiation or changing transcription factors binding specificity [7]. In the present study we focused on the significance of two FOXP3 promoter SNPs: –3279 C/A (rs3761548) and –924 A/G (rs2232365) in BCC patients. The role of –3279 C/A (rs3761548) FOXP3 polymorphism has been previously associated with several neoplasia. The presence of A allele correlated with a higher risk of thyroid cancer, non-small cell lung cancer, colorectal cancer, breast cancer, ovarian cancer and Wilms’ tumour [8, 26–30]. To our knowledge only one study examined the correlation between rs3761548 SNP and FOXP3 expression in neoplastic tissue [28]. Lopes et al. [28] found that the presence of –3279 A allele in breast cancer patients correlated with increased (but not statistically significant) expression of FOXP3. The role of –924 A/G (rs2232365) polymorphism has been previously examined in patients with Wilms’ tumour and breast cancer [30, 31]. In both studies the presence of –924 A allele was associated with higher disease susceptibility. Previously authors noticed that rs2232365 SNP has been located in a presumed binding site of GATA-3 transcription factor, which is able to bind to the promoter and induce FOXP3 expression only in the presence of A allele [30, 32]. To the best of our knowledge, none of the previous studies examined the association between the above mentioned FOXP3 polymorphisms and BCC susceptibility. In the present study no association was observed between examined FOXP3 polymorphisms and BCC risk.

CTLA-4 -318C/T (rs5742909) polymorphism is located within the promoter region of CTLA-4 gene (2q33.2). Previous studies showed that the presence of –318 T allele is associated with higher promoter activity and increased surface CTLA-4 expression [33, 34]. Therefore it has been hypothesized that the presence of -318 T allele may enhance T_regs suppressor activity, subsequently increasing the risk of cancer development/progression. Meta-analysis performed by Zhang et al. [9] showed that the presence of T allele was associated with an increased cancer risk among Europeans, but not among Asians. To our knowledge, only one study examined the role of CTLA-4 CT60 polymorphism in BCC susceptibility [6]. The role of –318C/T (rs5742909) polymorphism in this neoplasia has not been investigated so far.

In the present study we have found no association between CTLA-4 rs5742909 polymorphism and BCC susceptibility, however, the presence of CC genotype was statistically more frequent in patients with multiple BCCs.

There are several limitations concerning the study. First, the studied population was selected from one region, so the results may not be representative for other populations. Secondly, the studied group was relatively small, which could influence the analysis statistical power. The third limitation was the retrospective collection of some data, like the previous history of BCC, as not all patients had complete medical records/good knowledge about previously excised skin lesions. As it was difficult to objectively measure the lifetime exposure to sunlight we had decided to consider sun-exposed vs. non-sun-exposed skin areas instead.

Conflict of interest

The authors declare no conflict of interest.