Abstract
Background and Objectives
Both genetic and environmental factors contribute to stroke risk. We sought to identify novel metabolites associated with incident stroke in the Reasons for Geographic and Racial Differences in Stroke (REGARDS) cohort and determine whether they reflected genetic or environmental variation.
Methods
This was a stroke case–cohort observational study nested in REGARDS. Cases were defined as incident stroke and metabolomic profiles were compared to a randomly selected control cohort. In baseline plasma samples, 162 metabolites were measured using liquid chromatography–tandem mass spectrometry. Cox proportional hazards models were adjusted for age, sex, race, and age by race in the base model. Fully adjusted models included traditional stroke risk factors. Mediation analyses conducted for these stroke risk factors used the metabolite as mediator. Genome-wide associations with the leading candidate metabolites were calculated using array data. Replication analyses in the Jackson Heart Study (JHS) were conducted using random effects meta-analysis.
Results
There were 2,043 participants who were followed over an average period of 7.1 years, including 1,075 stroke cases and 968 random controls. Nine metabolites were associated with stroke in the base model, 8 of which were measured and remained significant in meta-analysis with JHS. In the fully adjusted model in REGARDS, guanosine (hazard ratio [HR] 1.34, 95% CI 1.18–1.53; p = 7.26 × 10−6) and pseudouridine (HR 1.28, 95% CI 1.13–1.45; p = 1.03 × 10−4) were associated with incident ischemic stroke following Bonferroni adjustment. Guanosine also partially mediated the relationship between hypertension and stroke (17.6%) and pseudouridine did not mediate any risk factor. Genome-wide association analysis identified loci rs34631560 and rs34631560 associated with pseudouridine, but these did not explain the association of pseudouridine with stroke.
Discussion
Guanosine and pseudouridine are nucleosides associated with incident ischemic stroke independently of other risk factors. Genetic and mediation analyses suggest that environmental exposures rather than genetic variation link nucleoside levels to stroke risk.
Classification of Evidence
This study provides Class II evidence that guanosine and pseudouridine are associated with incident stroke.
Stroke remains a leading cause of death and disability in the United States,1 with significant geographic and racial disparities in its incidence. Traditional risk factors derived from the Framingham Heart Study2 and Cardiovascular Health Study3 have identified several core stroke risk factors, including age, sex, hypertension, systolic blood pressure, diabetes, smoking, atrial fibrillation, and cardiovascular disease. Although these risk factors are important for guiding stroke prevention strategies, there remains unaccounted-for risk, which is amplified among Black individuals.4 The identification of additional factors that either directly contribute to or mediate the risk of stroke through established risk factors is also important to improve prevention.5
The composition of circulating metabolites potentially represents the convergence of physiology, gene expression, and environmental conditions. Metabolomics can therefore capture systems-level information and may help in estimating stroke risk, defining stroke diagnosis, or identifying stroke etiology.6 Although stroke risk is complex, metabolite markers could represent underlying biological processes that account for some of the excess risk not attributable to traditional stroke risk factors. Furthermore, examining genetic variants linked to candidate metabolites could help elucidate how levels of these metabolites are regulated and provide insights into individual variation.
Our aim was to look for differences between individuals with and without incident stroke using a targeted metabolomics approach designed to measure key components of central metabolic pathways. Currently mapped metabolic networks suggest that certain endogenous or exogenous stimuli (food, stress, infections, genetic susceptibility, and other environmental factors) lead to systemic changes detectable and reflected by levels of circulating metabolites. Second, we hypothesize that, if found to associate with stroke occurrence, specific metabolites could be used as early markers of disease risk. Finally, metabolites and their associated metabolic network reflect disease phenotypes and indicate potential routes for therapeutic interventions.
The biracial Reasons for Geographic and Racial Differences in Stroke (REGARDS) cohort provides a unique opportunity for metabolomic investigations related to stroke risk, and potential differences by race, given its size and the number of incident stroke cases. The objectives of this investigation were to (1) identify novel metabolites associated with incident stroke, (2) determine whether candidate stroke metabolites were mediators of known stroke risk factors, and (3) identify racial variation in polymorphisms linked to candidate metabolites. Leading candidates were studied and meta-analyzed with an independent population-based observational study, the Jackson Heart Study (JHS).7
Methods
Study Populations
The REGARDS study is a prospective cohort study that enrolled 30,239 non-Hispanic Black and White participants ≥45 years of age between 2003 and 2007. We report data on incident ischemic stroke cases that were compared to a stratified cohort random subset of participants. Methods for enrollment and the design of the cohort study have been described in detail.8,9 Briefly, participants were contacted by phone and consented individuals completed a telephone interview to obtain clinical, demographic, and lifestyle information (telephone response rate 33%; cooperation rate 49%). Exclusion criteria were medical conditions preventing long-term participation, past malignancies or active treatment for cancer, nursing home placement, inability to communicate in English, and race other than Black or White. Race classification was self-reported during the telephone interview.10 During an in-home visit 2–3 weeks later, fasting baseline EDTA blood samples were collected by venipuncture.11 Blood samples were stored on ice until centrifuged and subsequent plasma aliquots were stored in a central laboratory at −80°C until metabolite profiling analysis. Participants were contacted every 6 months by telephone to ascertain hospitalizations and health care encounters for stroke.
Medical records, including neuroimaging and other diagnostic reports, were retrieved and centrally reviewed by physicians to confirm the diagnosis, stroke type, and possible causes. In instances where imaging data were unavailable or if medical records were judged insufficient, a questionnaire was completed using a protocol developed for previous stroke clinical trials12,13 and observational studies.14,15 At least 2 physician adjudicators reviewed all the available information and classified events by stroke type and severity for every recorded potential event. In cases of disagreement, additional adjudicators reviewed the event. A stroke event was recorded if all reviewers agreed on the occurrence of stroke and stroke subtype. Further details about the study population and event verification protocols have been published elsewhere.8
For this analysis, we included all ischemic strokes adjudicated through April 1, 2019 (n = 1,075) without prebaseline stroke or TIA and a cohort random sample that was stratified on age, race, and sex, as previously described (n = 968).16 Ischemic stroke was defined as a focal neurologic deficit lasting >24 hours or nonfocal neurologic symptoms consistent with stroke on neuroimaging as defined by the WHO.17 Hemorrhagic stroke (n = 122) cases included both intracerebral hemorrhage and subarachnoid hemorrhage, and were excluded from the study.
Covariates
We included covariates as defined in the Framingham stroke risk score function.2,4 Age, race, and smoking status were determined by self-report. During the in-home visits, systolic blood pressure (SBP) was measured twice and the average of 2 measurements was used. Hypertension was defined as SBP ≥140 mm Hg, diastolic blood pressure ≥90 mm Hg, or self-reported use of antihypertensive medications. Diabetes mellitus (DM) was defined as either current diabetes medication use (insulin or oral glucose lowering agents) or as blood glucose concentrations of ≥126 mg/dL and ≥200 mg/dL for fasted and nonfasted states, respectively.
Cardiovascular disease (CVD) was defined as self-reported history of myocardial infarction, coronary revascularization procedure, or baseline evidence of a prior myocardial infarction on the study ECG. Left ventricular hypertrophy (LVH) was classified by ECG and atrial fibrillation (AF) was determined from medical history or presence on ECG.
Targeted Metabolomics
Polar metabolites were extracted using protein precipitation from 30 μL of EDTA plasma. Sample extraction was carried out over ice and isotopic standards, including proline (13C5, 15N), glutamine (13C5, 15N2), deuterated leucine-d10, and phenylalanine-d8 for quality control monitoring. Standards were purchased from Cambridge Isotope Laboratories. The extracted metabolites from the supernatant were separated on Xbridge Amide columns (2.1 × 100 mm 3.5 µm; Waters) applying previously described methods using dual Infinity II 1290 high-performance liquid chromatography pumps and a 6495 QQQ tandem mass spectrometer (Agilent).6,18-20
Human pooled plasma samples were also extracted and injected after every 10 samples for quality control measurements. In this study, 162 metabolites were detected, and all peaks were integrated and reviewed using MassHunter QQQ Quantitative Analysis software (Agilent). Following peak integration, each metabolite was normalized to the nearest pooled plasma samples using standard approaches. Due to the nonparametric distribution of metabolite levels, all values were rank-based inverse normal transformed prior to statistical analyses.
Statistical Methods
To account for the stratified sampling of the cohort random sample, weighted proportional hazards analysis was used to evaluate the associations between exposures and the outcome, as detailed in prior studies.21-24 Weightings were calculated based on the stratification factors age, race, and sex. At the time of analyses, the random cohort included 68 participants who developed ischemic stroke during the observation period. These participants were censored at the time of the stroke onset, as described elsewhere.23,25 Weighted Cox proportional hazard regression models were used to calculate the hazard ratios (HRs) per unit SD of each metabolite with incident ischemic stroke. To account for the competing risk of death, cause-specific proportional hazard models were utilized, which is recommended when etiologic questions are of interest.26 In the base model (model 1), covariates included age, sex, race, and age by race interaction, similar to other reports on stroke from REGARDS.16,21,23 A fully adjusted model further incorporated the Framingham stroke risk factors: current smoking status, SBP, hypertension, DM, cardiovascular disease, LVH, and AF (model 2). Bonferroni correction was used to account for multiple comparisons based on 162 metabolites (p < 3.09 × 10−4).
The difference in coefficients mediation approach was used to examine the underlying observed relationships between clinical risk factors, metabolites, and ischemic stroke. The HRs for each clinical risk factor were calculated for incident stroke, with and without adjusting for individual metabolite mediators. Differences in HR and p values for mediation were determined. All metabolites associated with incident stroke at a nominal p ≤ 0.05 were included in these analyses.27,28 Bootstrapping (n = 100) was used to determine 95% CIs of the difference in HRs of stroke for each risk factor with and without metabolite adjustment. Statistical analyses were conducted using SAS version 9.4, STATA version 15, and survey 4.0 for R version 3.6.
Replication and Meta-analyses
JHS is a prospective, community-based epidemiologic study of cardiovascular disease in Black participants, which enrolled 5,306 participants in 2000–2004. The study design, recruitment, and data collection for the JHS have been described elsewhere.29 There were 1,944 individuals with metabolomics data available, including 119 incident ischemic stroke cases and 1,825 participants without stroke. Metabolomics measurements in JHS were performed using targeted liquid chromatography with tandem mass spectrometry and have been previously reported.30,31 There were 126 metabolites in common between JHS and REGARDS. Missing data were excluded from analyses. Statistically significant results from our discovery in REGARDS (6 metabolites) were evaluated for replication (with p < 0.008) using Cox proportional hazard analysis of each metabolite and incident ischemic stroke. Given the limited number of events in JHS, models were adjusted for age and sex; because all participants were Black, race was not included as a covariate. The initial candidate metabolites did not meet the prespecified threshold for replication but were directionally consistent with the findings in REGARDS. Given the limited number of events in JHS, we subsequently performed meta-analysis of the 126 metabolites identified as common between the 2 studies under a random effects model using the open-source METASOFT software tool. For meta-analysis, significance was set at p < 3.97 × 10−4, corresponding to the Bonferroni threshold for 126 tests.32
Genome-wide Association Studies
Genotyping was conducted using the Illumina Infinium Multi-Ethnic AMR/AFR Bead Chip (MEGA) array33 in REGARDS. Preimputation quality control included removal of internal duplicates, HapMap controls, and sex mismatches. Principal component analysis was performed, using EIGENSOFT software (version 7.2.1), to estimate population stratification. Imputation using cleaned single nucleotide polymorphisms (SNPs) was conducted with the Transomics for Precision Medicine cosmopolitan reference panel. A total of 15, 248, and 746 variants with imputation quality (R2) > 0.3 and minor allele frequency >0.01 were retained. SNPs in Hardy-Weinberg disequilibrium (p < 10−6) were removed from further analysis. Genome-wide association was performed to identify SNPs associated with the top candidate metabolites and to examine associations separately by race. Models were adjusted for age, sex, and the first 3 genetic principal components. These models were conducted separately by race and meta-analyzed, with analysis carried out in PLINK. The regional association plots were created using SAS version 9.4. The multiple testing corrected significance threshold for genome-wide significance was set at p < 5 × 10−8.
Standard Protocol Approvals, Registrations, and Patient Consents
The REGARDS study was approved by the institutional review boards of all participating institutions and written informed consent was obtained from all participants. The metabolomics analysis was also approved by the Mass General Brigham institutional review board.
Data Availability
Qualified investigators may request access to obtain de-identified data in accordance with institutional data sharing agreements.
Results
Study Population
Over an average follow-up of 7.1 ± 4.5 years, there were 1,075 ischemic stroke cases identified in REGARDS. Participants who developed an ischemic stroke during the follow-up period were approximately 4 years older, more likely to be Black, and had higher rates of comorbidities as defined by the Framingham stroke risk score function2,4 and including hypertension, DM, CVD, LVH, and AF (Table 1).
Table 1.
Associations of Metabolites With Ischemic Stroke
Nine metabolites surpassed the Bonferroni-adjusted threshold in Cox proportional hazards models adjusting for age, sex, race, and age by race interaction (Table 2). The 9 metabolites included 4 nucleosides (guanosine, pseudouridine, cytidine, and xanthosine), 3 amino acid derivatives (dimethylguanidino valeric acid [DMGV], acetylneuraminic acid, and gluconic acid), and 2 exogenous compounds (atorvastatin and the nicotine metabolite cotinine).
Table 2.
Replication and Meta-analyses With the JHS Cohort
There were 126 metabolites measured in common between the REGARDS and JHS cohorts. Of the 9 leading metabolites identified in REGARDS, 3 were not measured in JHS (guanosine, acetylneuraminic acid, and cytidine), while an additional 3 (uric acid, C4-carnitine, and acetylglutamate) crossed the significance threshold following meta-analysis (Table 2). Except for xanthosine, HRs were similar for each metabolite between the 2 cohorts. Uridine, the precursor of pseudouridine,34 had the strongest association with incident ischemic stroke in JHS (HR 0.69 per unit of SD in uridine level, 95% CI 0.57–0.83; p = 7.00 × 10−5) and had a similar direction of association in the REGARDS study (HR 0.87, 95% CI 0.79–0.97; p = 1.23 × 10−2), but did not remain significant following meta-analysis (meta HR 0.78; meta p = 3.61 × 10−2) after correction for multiple testing. However, cotinine, gluconic acid, pseudouridine, DMGV, and atorvastatin as well as 3 additional metabolites (uric acid, C4-carnitine, and acetylglutamate) were significant after meta-analysis (Table 2).
Metabolites and Traditional Risk Factors for Stroke
We next examined which of the leading metabolites were associated with stroke independent of traditional stroke risk factors. We carried forward the metabolites identified in meta-analysis (cotinine, gluconic acid, pseudouridine, DMGV, atorvastatin, uric acid, C4-carnitine, and acetylglutamate) and the 3 metabolites that were unique in REGARDS (guanosine, acetylneuraminic acid, and cytidine). Following adjustment for covariates defined by the Framingham stroke risk function, 2 metabolites remained associated with incident ischemic stroke: guanosine and pseudouridine (Table 2).
To understand the potential role of the top candidate metabolites, we next examined associations with individual stroke risk factors. In age-, sex-, and race-adjusted multivariable models, hypertension was associated with guanosine, DMGV, acetylneuraminic acid, cytidine, and uric acid (Table 3). Metabolites associated with DM included gluconic acid, DMGV, acetylneuraminic acid, uric acid, and acetylglutamate. Cotinine was associated with a history of smoking and atorvastatin was associated with CVD. Pseudouridine and C4-carnitine were not associated with any risk factors (Table 3).
Table 3.
We next determined whether the metabolites mediated the associations of risk factors with incident stroke (Table 4). As a proof of principle, we first examined cotinine, a metabolite of nicotine after smoking,35 reasoning that this metabolite would partially mediate the association between current smoking and incident ischemic stroke. Cotinine was highly associated with current smoking status (odds ratio 16.2 of being a smoker per unit of SD of cotinine level, 95% CI 7.6–34.5; p = 7.39 × 10−13) and mediated 48% of the association between smoking and incident ischemic stroke (HR without mediator 1.84, 95% CI 1.37–2.49; HR with mediator 1.37, 95% CI 0.97–1.94; mediation p = 1.60 × 10−4). Guanosine was associated with hypertension (Table 4) and mediated the incidence of ischemic stroke through hypertension by 17.6% (HR without mediator 1.91, 95% CI 1.49–2.46; HR with mediator 1.71, 95% CI 1.32–2.21; mediation p = 7.57 × 10−4). Pseudouridine was not a significant mediator of any of the stroke risk factors.
Table 4.
Genome-wide Association Studies
Because pseudouridine and guanosine were identified independent of traditional stroke risk factors, we next evaluated whether genetic variation could account for some of the difference in levels of these metabolites using genome-wide association studies. Black and White participants were first analyzed separately and then jointly in these analyses (Table 5). Among individuals of Black ancestry, we found a genome-wide significant association signal for pseudouridine on chromosome 6 (Figure, A). The lead SNP rs66484859 (GRCh37/hg19 genome assembly, chr6:101578136) minor allele was associated with higher pseudouridine level (β = 0.30; p = 2.71 × 10−8) (Figure, B), and this was located within the GRIK2 (glutamate ionotropic receptor kainate type subunit 2) locus. In individuals of White ancestry, the association of pseudouridine with the chromosome 6 GRIK2 locus was not present (Table 5), nor was any other locus; however, when both Black and White ancestry groups were combined, a second region of association was identified on chromosome 15, with lead SNP rs34631560 (GRCh37/hg19 genome assembly, chr15:88973692) adjacent to the MFGE8 and ABHD2 (CAMRA) loci (Figure, C and D; Table 5). This association was larger in White participants (Table 5). Neither of the leading SNPs for pseudouridine was associated with ischemic stroke risk and we did not identify any genetic loci in association with guanosine level. Of the other metabolites identified in the base model, DMGV level was associated with the AGXT2 (alanine-glyoxylate aminotransferase 2) gene locus, which has previously been reported.36,37
Table 5.
Classification of Evidence
This study provides Class II evidence that guanosine and pseudouridine are associated with incident stroke.
Discussion
In this study, we performed targeted metabolomic profiling in the biracial REGARDS cohort to identify plasma metabolites associated with risk of incident ischemic stroke, followed by meta-analysis with the JHS cohort. Following adjustment for traditional stroke risk factors, there were 2 nucleoside metabolites, guanosine and pseudouridine, that remained significant. We also examined whether the leading metabolites mediated associations of other risk factors with stroke and found that guanosine mediated 17.6% of the association of hypertension with stroke. Finally, we observed a race-specific genetic locus associated with pseudouridine level, but this was not associated with stroke risk. Taken together, our findings identify 2 novel nucleosides linked to stroke risk that do not appear to be related to underlying genetic variation or to known stroke risk factors. Rather, these nucleosides most likely reflect unrecognized environmental or biological risk pathways.
Our analysis demonstrated that guanosine was a partial mediator of the relationship between hypertension and incident ischemic stroke risk and it also remained associated with stroke risk independent of risk factors. These results could indicate that, in addition to hypertension, guanosine may also serve as a biochemical marker of a process not captured by traditional stroke risk factors. For example, some evidence suggests that guanosine directly contributes to endothelial injury, limiting proliferation and inhibiting cell viability in a dose-dependent fashion.38 In addition, the level of guanosine and other nucleosides has been linked to dietary intake and subsequent effects on colonic microbiota.39–42 It is therefore possible that the increased risk associated with elevated guanosine may be related to dietary patterns, which is an important area for future research.
We also found that pseudouridine, a modified isomer of uridine, was associated with incident ischemic stroke. Furthermore, no mediation effects of pseudouridine were detected in the relationship between risk factors and stroke risk. Pseudouridine is the most abundant posttransitional modification of RNA, in which a uridine residue is irreversibly isomerized into pseudouridine. Pseudouridylation can convert nonsense codons into sense codons,43 alter mRNA splicing and stability,44 and can also facilitate noncanonical base pairing, each of which is regulated in response to environmental stress signals.34,45 As a biomarker, pseudouridine is not converted back to uridine and enters the circulation following release after RNA hydrolysis. Therefore, pseudouridine levels may serve as a reflection of cellular stress and turnover. We also observed that uridine was inversely related to stroke risk in both cohorts, although the significance level did not surpass adjustment for multiple hypothesis testing. Nevertheless, associations in the opposite direction for uridine and pseudouridine highlight the possible precursor–product role of these pyrimidines in stroke risk.
To further investigate the role of guanosine and pseudouridine as risk markers for stroke, we examined whether genetic variation could account for the observed risk. We did not identify any SNPs associated with guanosine. SNPs within or adjacent to 2 separate loci were associated with pseudouridine, including rs66484859 in the GRIK2 gene in individuals of African ancestry and rs34631560 and rs34631560 adjacent to the MFGE8 and ABHD2 genes, predominantly in individuals of European ancestry. None of these SNPs or the loci in general have been reported in association with ischemic stroke,46 including in recent studies that collectively studied more than 16,000 stroke cases.47,48 Taken together with the available known biology of guanosine and pseudouridine, we hypothesize that elevated levels of these nucleosides have an acquired rather than genetic basis for the relationship to stroke risk. Given the substantial systematic and structural differences in the lived experience between Black and White individuals in the United States, there are a number of potential social and environmental factors that could contribute to metabolite composition such as income, occupation, education, diet, or housing conditions. Future work is needed to systematically evaluate racial disparities in these factors that are linked to each of the identified risk markers. It is also important to note that our findings would not imply that either nucleoside is a direct causal agent for incident stroke, but rather (and perhaps more likely) each metabolite may be an indirect marker.
Several prior studies have evaluated metabolites associated with stroke, although important differences exist in comparison to our study. A recent meta-analysis of 7 cohorts was restricted to European ancestry populations and included 147 metabolites measured by nuclear magnetic resonance (NMR) spectroscopy.49 The combined cohorts included 38,797 controls and 1,277 ischemic stroke events, a similar number as this study. Based on the lower sensitivity of NMR, higher abundance metabolites were studied. Histidine, pyruvate, phenylalanine, and 7 types of lipoprotein subparticles were associated with incident stroke. Atherosclerosis Risk in Communities (ARIC), a prospective epidemiologic study of participants of European and African ancestry, measured 245 metabolites that included 346 incident ischemic stroke cases.50 The ARIC study identified tetradecanedioate and hexadecanedioate as stroke risk factors, but no other associations remained significant in fully adjusted models.50 It is possible that we did not verify these associations due to differences in metabolome coverage, differences in the cohort design, and possibly difference in the time intervals from sampling to stroke onset. However, it is also possible the prior findings, from a smaller number of cases, were chance findings.
There are several strengths of our study that are worth noting, including the large number of incident stroke cases and the inclusion of Black and White participants. We also leveraged a targeted tandem mass spectrometry platform that was enriched for biologically informative metabolites and has high specificity and sensitivity due to the tandem quadrupole design. There are also some limitations. First, there is some uncertainty about the role of long-term metabolite dynamics, diluting any observable relationship with future events in longitudinal studies. Among metabolomics studies, there are also analytical differences depending on the measurement platform, sampling handling and storage, and extraction procedures, each of which could introduce analytical variation. However, these factors would tend to bias results towards the null hypothesis, and therefore may strengthen our findings identified in replication and meta-analysis across 2 independent studies.
Our study identified that pseudouridine and guanosine were associated with incident ischemic stroke independently of traditional stroke risk factors. Mediation and genetic analyses suggest that, together with the known biology of these nucleosides, they may represent markers for acquired and possibly lifestyle-related exposures. Future research may further elucidate the role of these metabolites in linking to stroke risk.
Acknowledgment
The authors thank the investigators, staff, and participants of the REGARDS and JHS studies for their contributions. A full list of participating REGARDS investigators and institutions can be found at regardsstudy.org and for the JHS at jacksonheartstudy.org.
Glossary
- AF
atrial fibrillation
- ARIC
Atherosclerosis Risk in Communities
- CVD
cardiovascular disease
- DM
diabetes mellitus
- DMGV
dimethylguanidino valeric acid
- HR
hazard ratio
- JHS
Jackson Heart Study
- LVH
left ventricular hypertrophy
- NMR
nuclear magnetic resonance
- REGARDS
Reasons for Geographic and Racial Differences in Stroke
- SBP
systolic blood pressure
- SNP
single nucleotide polymorphism
Appendix. Authors
Footnotes
Class of Evidence: NPub.org/coe
Study Funding
This work was supported by the NIH (R01 NS099209) (W.T.K.), American Heart Association (AHA) (17CSA33550004) (W.T.K.), and NIH P20 GM135007 (M.C.). REGARDS is supported by NIH R01 HL13666 and by the cooperative agreement U01 NS041588 co-funded by the National Institute of Neurologic Disorders and Stroke (NINDS) and the National Institute on Aging (NIA), NIH, Department of Health and Human Services. The JHS is supported and conducted in collaboration with Jackson State University (HHSN268201800013I), Tougaloo College (HHSN268201800014I), the Mississippi State Department of Health (HHSN268201800015I), and the University of Mississippi Medical Center (HHSN268201800010I, HHSN268201800011I, and HHSN268201800012I) contracts from the National Heart, Lung, and Blood Institute (NHLBI) and the National Institute on Minority Health and Health Disparities (NIMHD). The content is solely the responsibility of the authors and the views expressed in this article are those of the authors and do not necessarily represent the official views of the NINDS, NIA, NHLBI, NIMHD, or the US Department of Health and Human Services. Representatives of NINDS were involved in the review of the manuscript but were not directly involved in the collection, management, analysis, or interpretation of the data.
Disclosure
Z. Ament, A. Patki, N. Chaudhary, V.M. Bhave, A. Garcia Guarniz, Y. Gao, and R. Gerszten report no disclosures relevant to the manuscript. A. Correa received grant funding to the JHS, which is supported in collaboration with Jackson State University (HHSN268201800013I), Tougaloo College (HHSN268201800014I), the Mississippi State Department of Health (HHSN268201800015I), and the University of Mississippi Medical Center (HHSN268201800010I, HHSN268201800011I, and HHSN268201800012I). S.E. Judd received funding to her institution for REGARDS research from NIH R01 HL13666 and from the cooperative agreement of NINDS, NIH, Department of Health and Human Services (U01 NS041588). M. Cushman received grant funding to her institution by NIH P20 GM135007. L. Long reports no disclosures relevant to the manuscript. M.R. Irvin received funding to his institution for REGARDS research from NIH R01 HL13666 and from the cooperative agreement of NINDS, NIH, Department of Health and Human Services (U01 NS041588). W.T. Kimberly received funding to his institution by NIH grant R01 NS099209 and AHA grant 17CSA33550004. Go to Neurology.org/N for full disclosures.
References
- 1.Benjamin EJ, Muntner P, Alonso A, et al. Heart disease and stroke statistics: 2019 update: a report from the American Heart Association. Circulation. 2019;139(10):e56-e528. [DOI] [PubMed] [Google Scholar]
- 2.Wolf PA, D'Agostino RB, Belanger AJ, Kannel WB. Probability of stroke: a risk profile from the Framingham Study. Stroke. 1991;22(3):312-318. [DOI] [PubMed] [Google Scholar]
- 3.Manolio TA, Kronmal RA, Burke GL, O'Leary DH, Price TR. Short-term predictors of incident stroke in older adults: the Cardiovascular Health Study. Stroke. 1996;27(9):1479-1486. [DOI] [PubMed] [Google Scholar]
- 4.Howard G, Cushman M, Kissela BM, et al. Traditional risk factors as the underlying cause of racial disparities in stroke. Stroke. 2011;42:3369-3375. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Kamin Mukaz D, Zakai NA, Cruz-Flores S, McCullough LD, Cushman M. Identifying genetic and biological determinants of race-ethnic disparities in stroke in the United States. Stroke. 2020;51:3417-3424. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Nelson SE, Ament Z, Wolcott Z, Gerszten RE, Kimberly WT. Succinate links atrial dysfunction and cardioembolic stroke. Neurology. 2019;92(8):e802-e810. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7.Booth JN, Abdalla M, Tanner RM, et al. Cardiovascular health and incident hypertension in blacks: JHS (the Jackson Heart Study). Hypertension. 2017;70(2):285-292. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Howard VJ, Cushman M, Pulley L, et al. The reasons for geographic and racial differences in stroke study: objectives and design. Neuroepidemiology. 2005;25(3):135-143. [DOI] [PubMed] [Google Scholar]
- 9.Howard VJ, Kleindorfer DO, Judd SE, et al. Disparities in stroke incidence contributing to disparities in stroke mortality. Ann Neurol. 2011;69(4):619-627. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Howard G, Kissela BM, Kleindorfer DO, et al. Differences in the role of black race and stroke risk factors for first vs. recurrent stroke. Neurology. 2016;86(7):637-642. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Gillett SR, Boyle RH, Zakai NA, McClure LA, Jenny NS, Cushman M. Validating laboratory results in a national observational cohort study without field centers: the Reasons for Geographic and Racial Differences in Stroke cohort. Clin Biochem. 2014;47(16-17):243-246. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Spence JD, Howard VJ, Chambless LE, et al. Vitamin Intervention for Stroke Prevention (VISP) trial: rationale and design. Neuroepidemiology. 2001;20(1):16-25. [DOI] [PubMed] [Google Scholar]
- 13.Lefkowitz DS, Brust JC, Goldman L, et al. A pilot study of the end point verification system in the Asymptomatic Carotid Atherosclerosis Study. J Stroke Cerebrovasc Dis. 1992;2(2):92-99. [DOI] [PubMed] [Google Scholar]
- 14.Wagenknecht LE, Mayer EJ, Rewers M, et al. The Insulin Resistance Atherosclerosis Study (IRAS) objectives, design, and recruitment results. Ann Epidemiol. 1995;5(6):464-472. [DOI] [PubMed] [Google Scholar]
- 15.Chambless LE, Toole JF, Nieto FJ, Rosamond W, Paton C. Association between symptoms reported in a population questionnaire and future ischemic stroke: the ARIC study. Neuroepidemiology. 2004;23:33-37. [DOI] [PubMed] [Google Scholar]
- 16.Cushman M, Judd SE, Howard VJ, et al. N-terminal pro-B-type natriuretic peptide and stroke risk: the Reasons for Geographic and Racial Differences in Stroke cohort. Stroke. 2014;45(6):1646-1650. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Howard G, Cushman M, Kissela BM, et al. Traditional risk factors as the underlying cause of racial disparities in stroke: lessons from the half-full (empty?) glass. Stroke. 2011;42:3369-3375. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Stapleton CJ, Acharjee A, Irvine HJ, Wolcott ZC, Patel AB, Kimberly WT. High-throughput metabolite profiling: identification of plasma taurine as a potential biomarker of functional outcome after aneurysmal subarachnoid hemorrhage. J Neurosurg. 2019:1-8. [DOI] [PubMed] [Google Scholar]
- 19.Ament Z, Bevers MB, Wolcott Z, Kimberly WT, Acharjee A. Uric acid and gluconic acid as predictors of hyperglycemia and cytotoxic injury after stroke. Transl Stroke Res. 2021;12(2):293-302. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Kimberly WT, O'Sullivan JF, Nath AK, et al. Metabolite profiling identifies anandamide as a biomarker of nonalcoholic steatohepatitis. JCI Insight. 2017;2:e92989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Chaudhary NS, Bridges SL, Saag KG, et al. Severity of hypertension mediates the association of hyperuricemia with stroke in the REGARDS case cohort study. Hypertension. 2020;75(1):246-256. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Olson NC, Cushman M, Judd SE, et al. Associations of coagulation factors IX and XI levels with incident coronary heart disease and ischemic stroke: the REGARDS study. J Thromb Haemost. 2017;15(6):1086-1094. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23.Onland-Moret NC, van der ADL, van der Schouw YT, et al. Analysis of case-cohort data: a comparison of different methods. J Clin Epidemiol. 2007;60:350-355. [DOI] [PubMed] [Google Scholar]
- 24.Zakai NA, Judd SE, Alexander K, et al. ABO blood type and stroke risk: the Reasons for Geographic and Racial Differences in Stroke study. J Thromb Haemost. 2014;12(4):564-570. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 25.Barlow WE, Ichikawa L, Rosner D, Izumi S. Analysis of case-cohort designs. J Clin Epidemiol. 1999;52(12):1165-1172. [DOI] [PubMed] [Google Scholar]
- 26.Austin PC, Lee DS, Fine JP. Introduction to the analysis of survival data in the presence of competing risks. Circulation. 2016;133(6):601-609. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27.Nguyen QC, Osypuk TL, Schmidt NM, Glymour MM, Tchetgen Tchetgen EJ. Practical guidance for conducting mediation analysis with multiple mediators using inverse odds ratio weighting. Am J Epidemiol. 2015;181(5):349-356. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28.Tchetgen Tchetgen EJ. Inverse odds ratio-weighted estimation for causal mediation analysis. Stat Med. 2013;32:4567-4580. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Tahir UA, Katz DH, Zhao T, et al. Metabolomic profiles and heart failure risk in black adults: insights from the Jackson Heart Study. Circ Heart Fail. 2021;14(1):e007275. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 30.Kakkar AK, Cimminiello C, Goldhaber SZ, Parakh R, Wang C, Bergmann JF. Low-molecular-weight heparin and mortality in acutely ill medical patients. N Engl J Med. 2011;365(26):2463-2472. [DOI] [PubMed] [Google Scholar]
- 31.Cheng S, Rhee EP, Larson MG, et al. Metabolite profiling identifies pathways associated with metabolic risk in humans. Circulation. 2012;125(18):2222-2231. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Han B, Eskin E. Random-effects model aimed at discovering associations in meta-analysis of genome-wide association studies. Am J Hum Genet. 2011;88(5):586-598. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33.Zhao X, Geng X, Srinivasasainagendra V, et al. A PheWAS study of a large observational epidemiological cohort of African Americans from the REGARDS study. BMC Med Genomics. 2019;12(suppl 1):26. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Schwartz S, Bernstein DA, Mumbach MR, et al. Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. Cell. 2014;159(1):148-162. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Kyerematen GA, Damiano MD, Dvorchik BH, Vesell ES. Smoking-induced changes in nicotine disposition: application of a new HPLC assay for nicotine and its metabolites. Clin Pharmacol Ther. 1982;32(6):769-780. [DOI] [PubMed] [Google Scholar]
- 36.Ottosson F, Ericson U, Almgren P, et al. Dimethylguanidino valerate: a lifestyle‐related metabolite associated with future coronary artery disease and cardiovascular mortality. J Am Heart Assoc. 2019;8:e012846. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.O'Sullivan JF, Morningstar JE, Yang Q, et al. Dimethylguanidino valeric acid is a marker of liver fat and predicts diabetes. J Clin Invest. 2017;127:4394-4402. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Han Z, Wyche JH. Guanosine induces necrosis of cultured aortic endothelial cells. Am J Pathol. 1994;145(2):423-427. [PMC free article] [PubMed] [Google Scholar]
- 39.Vedder D, Walrabenstein W, Heslinga M, et al. Dietary interventions for gout and effect on cardiovascular risk factors: a systematic review. Nutrients. 2019;11:1-19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 40.Sauer N, Mosenthin R, Bauer E. The role of dietary nucleotides in single-stomached animals. Nutr Res Rev. 2011;24(1):46-59. [DOI] [PubMed] [Google Scholar]
- 41.Furuhashi M. New insights into purine metabolism in metabolic diseases: role of xanthine oxidoreductase activity. Am J Physiol Endocrinol Metab. 2020;319(5):E827-E834. [DOI] [PubMed] [Google Scholar]
- 42.Lee JB, Radhi M, Cipolla E, et al. A novel nucleoside rescue metabolic pathway may be responsible for therapeutic effect of orally administered cordycepin. Sci Rep. 2019;9(1):15760-15812. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.Karijolich J, Yu YT. Converting nonsense codons into sense codons by targeted pseudouridylation. Nature. 2011;474(7351):395-398. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 44.Wu G, Xiao M, Yang C, Yu YT. U2 snRNA is inducibly pseudouridylated at novel sites by Pus7p and snR81 RNP. EMBO J. 2011;30(1):79-89. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 45.Carlile TM, Rojas-Duran MF, Zinshteyn B, Shin H, Bartoli KM, Gilbert WV. Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells. Nature. 2014;515(7525):143-146. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 46.Malik R, Chauhan G, Traylor M, et al. Multiancestry genome-wide association study of 520,000 subjects identifies 32 loci associated with stroke and stroke subtypes. Nat Genet. 2018;50(4):524-537. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 47.Traylor M, Farrall M, Holliday EG, et al. Genetic risk factors for ischaemic stroke and its subtypes (the METASTROKE Collaboration): a meta-analysis of genome-wide association studies. Lancet Neurol. 2012;11(11):951-962. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 48.NINDS Stroke Genetics Network (SiGN), International Stroke Genetics Consortium (ISGC). Loci associated with ischaemic stroke and its subtypes (SiGN): a genome-wide association study. Lancet Neurol. 2016;15:174-184. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 49.Vojinovic D, Kalaoja M, Trompet S, et al. Association of circulating metabolites in plasma or serum and risk of stroke. Neurology. 2021;96:e1110-e1123. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50.Sun D, Tiedt S, Yu B, et al. A prospective study of serum metabolites and risk of ischemic stroke. Neurology. 2019;92(16):e1890-e1898. [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
Qualified investigators may request access to obtain de-identified data in accordance with institutional data sharing agreements.