Abstract
Background
Staphylococcus is a genus of bacteria responsible for various infections ranging from mild skin to severe systemic diseases. Methicillin-resistant Staphylococcus aureus (MRSA) and coagulase-negative staphylococci (CoNS) are significant challenges owing to their resistance to multiple antibiotics, including macrolides, such as erythromycin, clarithromycin, and azithromycin.
Objective
This study aimed to systematically review and synthesize data on the prevalence of macrolide resistance in Staphylococcus spp., identify trends and changes in resistance patterns over time, and assess how testing methods and guidelines affect reported resistance rates.
Methods
The study conducted a systematic search of the Scopus, PubMed, Web of Science, and EMBASE databases. Studies have reported the proportion of macrolide-resistant Staphylococcus spp. Two authors independently extracted and analyzed the data using a random-effects model. Heterogeneity was assessed, and subgroup analyses were performed based on country, continent, species, AST guidelines, methods, and period.
Results
In total, 223 studies from 76 countries were included. The pooled prevalence of resistance to erythromycin, clarithromycin, and azithromycin were 57.3, 52.6, and 57.9%, respectively. Significant heterogeneity was observed across studies (I2 > 95%, p < 0.001). Oceania (72%) had the highest erythromycin resistance, whereas Europe had the lowest (40.7%). Subgroup analyses revealed variations in resistance based on the species, with higher resistance in MRSA than in MSSA and CoNS than in other species. Over time, a slight decrease in erythromycin resistance has been observed (59.6% from 2015–2019 to 55% from 2020–2023).
Conclusion
This study emphasizes the high prevalence of macrolide resistance in Staphylococcus spp. and its notable regional variation. These findings highlight the necessity for standardized methodologies and global surveillance to manage macrolide resistance effectively. Controlling antibiotic resistance should prioritize enhancing public health measures and updating treatment guidelines.
Systematic review registration
https://www.crd.york.ac.uk/prospero/display_record.php?RecordID=557756, CRD42024557756.
Keywords: Staphylococcus, macrolide, meta-analysis, methicillin-resistant Staphylococcus aureus, coagulase-negative staphylococci
1. Introduction
Staphylococcus is a genus of bacteria that can cause many infections, from mild skin infections to serious systemic diseases. These infections can affect the skin, lungs, bloodstream, and medical devices and have become a significant treatment challenge, particularly for methicillin-resistant Staphylococcus aureus (MRSA) (Tong et al., 2015; Cheung et al., 2021). It is estimated that approximately 30% of people carry S. aureus on their bodies without any symptoms. In 2019, S. aureus was associated with more than 1 million deaths, with an estimated range of 816,000 to 1,470,000 deaths (Ikuta et al., 2022). In the United States, the rate of invasive MRSA infections in the black population (66.5 cases per 100,000 person-years) is more than twice that of the white population (27.7 cases per 100,000 person-years). In Australia, the incidence of Staphylococcus aureus bacteremia (SAB) is 5.8 to 20 times higher among Indigenous Australians than among non-Indigenous Australians. Similarly, in New Zealand, Māori and Pacific Island communities have significantly higher rates of SAB than those of European descent (Tong et al., 2015). In recent years, there has been a significant increase in the rate of MRSA colonization in healthy individuals, potentially contributing to the spread of MRSA in both community and hospital settings (Barcudi et al., 2020). In addition, MRSA is a pathogen resistant to multiple antibiotics, complicating infection management and leading to increased healthcare costs and adverse outcomes (Abebe and Birhanu, 2023; Lan et al., 2024; Saleem et al., 2025). Globally, the pathogen-drug combination with the most significant increase in attributable burden was MRSA. Its attributable deaths have doubled from 57,200 (range 34,100-80,300) in 1990 to 130,000 (range 113,000-146,000) in 2021(Naghavi et al., 2024).
Antibiotic resistance is a global health crisis that threatens the effectiveness of treatments for bacterial infections. Misuse and overuse of antibiotics have accelerated the development of resistance, rendering many therapies ineffective (Yadav and Kapley, 2021; Estany-Gestal et al., 2024). Macrolides, such as erythromycin, clarithromycin, and azithromycin, are widely used to treat various staphylococcal infections. However, the increasing emergence of macrolide resistance in Staphylococcus spp. has become a critical challenge in treating infections caused by these bacteria. Resistance to macrolides has been attributed to the methylation of specific targets in the 23S rRNA by methylases encoded by erm genes, particularly erm(C) and erm(A), which can be constitutive or inducible. In addition, efflux pumps, such as ABC-F proteins encoded by msr genes and major facilitator superfamily transporters encoded by mef genes, drug inactivation by phosphotransferases encoded by mph genes, and esterase encoded by ere genes, confer macrolide resistance (Leclercq, 2002; Miklasinska-Majdanik, 2021; El Mammery et al., 2023; Mahfouz et al., 2023). These mechanisms show regional variation, reflecting differences in the prevalence of resistance genes and differences in antibiotic use practices (Miklasinska-Majdanik, 2021).
Overall, antibiotic resistance reduces the effectiveness of these antibiotics and complicates the treatment of common staphylococcal infections such as skin infections, pneumonia, and bacteremia.
The global burden of macrolide-resistant staphylococci affects both public health and healthcare systems. Data indicate increasing infection rates and resistance patterns, particularly in healthcare-associated infections where S. aureus is a leading cause of morbidity and mortality (An et al., 2024). The economic impact is also profound, with resistant infections leading to longer hospital stays, more complex treatment regimens, and increased healthcare costs (Lodise and McKinnon, 2007). However, the limited number of effective treatment options for resistant infections increases the risk of adverse outcomes. This underscores the importance of developing novel therapeutic approaches and implementing stringent infection control measures (Guo et al., 2020).
Previous research on macrolide resistance in staphylococci has been limited by study design and reporting inconsistencies, making it difficult to draw robust conclusions and identify consistent trends. In addition, many studies require extensive regional analyses, limiting the generalizability of findings and their impact on global health. Furthermore, gaps in understanding the temporal trends and dynamics of resistance highlight the need for longitudinal studies and broader surveillance efforts (Leclercq, 2002; Khader et al., 2019). Hence, standardized methodologies and collaborative efforts across regions are essential to improving our understanding and managing macrolide resistance in staphylococci.
The primary objective of this study was to systematically review and analyze the available data on the prevalence of macrolide resistance in Staphylococcus spp.
The secondary objectives were to identify trends and changes in resistance patterns over time, explore heterogeneity in resistance rates across regions and populations, and assess the impact of testing methods and guidelines on reported resistance rates. By addressing these objectives, this study aimed to fill the existing knowledge gaps and provide comprehensive insights into the dynamics of macrolide resistance in Staphylococcus spp. to guide future research and clinical practice.
2. Methods
This study was conducted according to PRISMA guidelines and included a meta-analysis to increase the robustness of the results. The study was registered in the PROSPERO registry under the code CRD42024557756.
2.1. Eligibility criteria
The inclusion criteria for this meta-analysis stipulated that studies must investigate Staphylococcus spp. macrolide resistance, report resistance rates, specify sample size determination and have complete English-language articles available. Only cross-sectional studies providing antimicrobial resistance (AMR) data, mainly those reporting baseline resistance levels before any interventions, were included. Such studies offer a population-based overview of resistance rates at a specific time and are, therefore, suitable for estimating the prevalence of macrolide resistance. Studies were excluded if published in languages other than English and were review articles, case reports, and case series studies.
2.2. Information sources
A comprehensive search was conducted in several major online databases, including Scopus, PubMed, Web of Science, and EMBASE, focusing on studies published through December 2023. These databases were selected for their extensive coverage of biomedical literature, ensuring a broad scope for the systematic review.
2.3. Search strategy
The search syntax was tailored to each database according to their respective guidelines (“Staphylococcus*” OR “S. aureus” OR “S. epidermidis” OR “S. saprophyticus” OR “S. lugdunensis” OR “S. hominis” OR “S. capitis” OR “S. haemolyticus” OR “CoNS” OR “MRCoNS” OR “MRSA” OR “MSCoNS” OR “VISA” OR “VSSA”) AND (macrolide* OR azithromycin OR clarithromycin OR erythromycin OR roxithromycin OR telithromycin OR spiramycin OR fidaxomicin) AND (resistant* OR susceptible*). This rigorous methodological approach ensured comprehensive coverage of relevant research topics.
2.4. Selection process
The systematic online database search results were imported into EndNote (version 20), removing duplicate entries. Two authors (NG and EP) independently screened and analyzed the relevant publications to minimize bias. Disagreements were resolved by a third author (TN).
2.5. Data collection process
Data extracted included first author(s), publication year, country, diagnostic method, sample source, number of positive tests, and total sample size. To ensure accuracy, two authors (MM and MB) extracted the data independently, and any disagreements were resolved by consensus.
2.6. Study risk of bias assessment
The quality of the included studies was assessed using the JBI tool. Two authors (MB and TN) independently evaluated the quality, and a third author (MSH) resolved disagreements.
2.7. Synthesis methods
This comprehensive systematic review and meta-analysis aimed to determine the global prevalence of macrolide-resistant Staphylococcus species. The analysis used proportions as the primary outcome measure. The main objective was to assess the prevalence of macrolide-resistant Staphylococcus strains, while the secondary objective sought to identify sources of heterogeneity between studies. Subgroup analyses investigated potential variability in resistance rates across different demographic and methodological factors. Additionally, trends in macrolide resistance over time were examined.
A random effects model was employed to analyze the data, allowing for considering variability within and between studies. The degree of heterogeneity was estimated using the DerSimonian-Laird method for τ2. Along with τ2, the Q-test for heterogeneity and the I2 statistic (Higgins and Thompson, 2002) were also calculated. Heterogeneity was considered present if τ2 > 0, regardless of the Q-test results.
Subgroup analyses were performed across various factors to explore sources of heterogeneity, including countries, continents, antibiotic susceptibility testing (AST) guidelines, AST methods, Staphylococcus species, coagulase status, and year groups. This stratification helped identify macrolide resistance patterns and potential drivers across regions and testing protocols.
A Logit Transformation was applied to the proportions of macrolide-resistant Staphylococcus species to account for variations in the proportion data and stabilize the variance. The logit transformation—also known as the log-odds transformation—was used to ensure that the outcome variable remained within the 0 to 1 range, mainly when dealing with extreme proportions of resistance. This transformation also normalized the distribution of proportions, facilitating more accurate meta-regression modeling.
Meta-regression analysis was conducted to explore temporal trends in macrolide resistance over time. Moderator variables included country, continent, AST guidelines, and year group. This analysis aimed to identify how macrolide resistance in Staphylococcus species has evolved across different geographical regions and under varying testing conditions.
Outliers and influential studies were identified using studentized residuals and Cook’s distances. Studies with studentized residuals exceeding the 100 × (1–0.05 / (2 × k)) th percentile of a standard normal distribution were flagged as potential outliers (after applying a Bonferroni correction for α = 0.05 and for k studies in the meta-analysis). Studies with Cook’s distances greater than the median plus six times the interquartile range of Cook’s distances were considered influential and examined for their impact on the overall estimates.
Funnel plot asymmetry was assessed using rank correlation and regression tests, with the standard error of the observed results serving as the predictor. This approach was used to evaluate potential publication bias. All statistical analyses were performed using R (version 4.2.1) and the metafor package (version 3.8.1) (Cochran, 1954; Begg and Mazumdar, 1994; Higgins and Thompson, 2002; Sterne and Egger, 2005; Viechtbauer, 2010; Viechtbauer and Cheung, 2010; Kuhn et al., 2015).
3. Results
3.1. Descriptive statistics
A total of 21,273 records as results of the systematic search were collected in reference manager software (EndNote version 20), and 14,285 duplicated articles were removed. Thousand eighty-eight articles were assessed in the title abstract for this section; 990 full-text articles were evaluated and excluded. Eventually, this systematic review and meta-analysis included 207 eligible studies. The reports came from 76 countries and six continents. The reports cover the years 2015 to 2023. The screening and selection of presages are summarized in the PRISMA flowchart (Figure 1). Characteristics and references of included studies are presented in Table 1.
Figure 1.
PRISMA flow diagram of study selection: this diagram illustrates the process of study identification, screening, eligibility assessment, and inclusion for the review. From a total of 21,273 records identified through databases, 207 studies were included in the final review after exclusion based on criteria such as duplication, irrelevance, and lack of data on antibiotic-resistant isolates.
Table 1.
A summary of the included studies in the meta-analysis is provided below, highlighting the characteristics employed.
| Author | Countries | AST method | AST guideline | Quality group | Species | Erythromycin | Clarithromycin | Azithromycin |
|---|---|---|---|---|---|---|---|---|
| Asbell et al. (2015) | United States | MM | C | L | MRSA | ND | ND | 283 |
| Abbasi et al. (2017) | Iran | DD | C | L | MRSA | 30 | ND | ND |
| Changchien et al. (2016) | China | DD | C | L | MRSA | 159 | ND | ND |
| Qin et al. (2017) | China | MIC | C | L | MRSA | 109 | ND | ND |
| Baek et al. (2016) | South Korea | AM | C | L | MRSA | 338 | ND | ND |
| Noordin et al. (2016) | Malaysia | DD | C | L | MRSA | 297 | ND | ND |
| Gitau et al. (2018) | Kenya | DD | C | L | MRSA | 129 | ND | ND |
| Coombs et al. (2020) | Australia | AM | C | L | MRSA | 174 | ND | ND |
| Shashindran et al. (2016) | ND | DD | C | L | MRSA | 84 | ND | ND |
| Horvath et al. (2020) | Hungary | MM | E | L | MRSA | 122 | ND | ND |
| Numanovic et al. (2021) | ND | DD | E | L | MRSA | 9 | ND | ND |
| Nichol et al. (2019) | Canada | MM | C | L | MRSA | ND | 305 | ND |
| Chaleshtori and Kachoie (2016) | ND | DD | C | L | MRSA | ND | ND | 10 |
| Chen Y. L. et al. (2021) | Taiwan | DD | C | L | MRSA | 16 | ND | ND |
| Khemiri et al. (2017) | Libya | DD | E | L | MRSA | 30 | ND | ND |
| Li et al. (2016) | China | MIC | C | L | MRSA | 553 | ND | ND |
| Napp et al. (2016) | United States | ND | ND | L | MRSA | ND | ND | 37 |
| Akbariyeh et al. (2017) | ND | DD | C | S | MRSA | 2 | ND | ND |
| Elzorkany et al. (2019) | India | DD | C | L | MRSA | 159 | ND | ND |
| Dormanesh et al. (2015) | Iran | DD | C | L | MRSA | 32 | ND | ND |
| Larsen et al. (2015) | Denmark | DD | E | L | MRSA | 56 | ND | ND |
| Valle et al. (2016) | Philippines | AM | C | L | MRSA | 3 | ND | ND |
| Guo et al. (2021) | China | DD | C | L | MRSA | 65 | ND | ND |
| Tekeli et al. (2016) | Turkey | AM | C | L | MRSA | 131 | ND | ND |
| Xie et al. (2016) | China | DD | C | L | MRSA | 58 | ND | ND |
| Nasirian et al. (2018) | Iran | DD | C | L | MRSA | 88 | ND | ND |
| Chauhan et al. (2021) | India | DD | C | H | MRSA | 15 | ND | ND |
| Livermore et al. (2015) | ND | MM | E | L | MRSA | 123 | ND | ND |
| Modukuru et al. (2021) | India | DD | C | H | MRSA | 174 | ND | ND |
| Ukpai et al. (2021) | Nigeria | DD | MG | L | MRSA | 122 | ND | ND |
| Pushkar et al. (2022) | India | DD | C | L | MRSA | 31 | ND | ND |
| Islam and Shamsuzzaman (2015) | Bangladesh | DD | C | L | MRSA | ND | ND | 11 |
| Preeja et al. (2021) | India | DD | C | L | MRSA | 54 | ND | ND |
| Yao et al. (2023) | China | AM | C | L | MRSA | 173 | ND | ND |
| Conceicao et al. (2021) | Portugal | DD | E | L | MRSA | 92 | ND | ND |
| Raut et al. (2017) | Nepal | DD | C | L | MRSA | 40 | ND | ND |
| Pradhan et al. (2021) | Nepal | DD | C | L | MRSA | 964 | ND | ND |
| El-Baghdady et al. (2020) | Egypt | DD | C | L | MRSA | 94 | ND | ND |
| Liang et al. (2018) | China | AM | C | L | MRSA | 51 | ND | ND |
| Fateh Amirkhiz et al. (2015) | Iran | DD | C | L | MRSA | ND | ND | 30 |
| Chen P. Y. et al. (2021) | Taiwan | MM | C | L | MRSA | 233 | ND | ND |
| Taherirad et al. (2016) | Iran | DD | C | L | MRSA | 36 | ND | ND |
| Bhattacharya et al. (2016) | India | DD | C | L | MRSA | ND | 180 | ND |
| Ukpai et al. (2021) | Nigeria | DD | C | L | MRSA | 122 | ND | ND |
| Leibler et al. (2017) | United States | AM | C | L | MRSA | 13 | ND | ND |
| Lee et al. (2020) | Taiwan | MIC | C | L | MRSA | 889 | ND | ND |
| Kong et al. (2018) | China | DD | C | L | MRSA | 5 | ND | ND |
| Petrović et al. (2016) | Serbia | DD | C | L | MRSA | 27 | ND | ND |
| de Benito et al. (2018) | Spain | DD | C | L | MRSA | 45 | ND | ND |
| Goudarzi et al. (2018) | Iran | DD | C | L | MRSA | 50 | ND | ND |
| Ouidri (2018) | Algeria | DD | C | L | MRSA | 9 | ND | ND |
| Esmaeili Benvidi et al. (2017) | Iran | DD | C | L | MRSA | 59 | ND | ND |
| Yitayeh et al. (2021) | Ethiopia | DD | C | L | S. Saprophiticus | 12 | ND | ND |
| Asbell et al. (2015) | United States | MM | C | L | MRCONS | ND | ND | 120 |
| Sheeba et al. (2021) | India | ND | C | L | CONS | 182 | ND | ND |
| Almasri et al. (2016) | Palestinian Territories | MIC | C | L | Staphylococcus Spp | 131 | ND | ND |
| Maleki et al. (2019) | Iran | DD | C | L | S. aureus | 18 | ND | ND |
| Peng et al. (2021) | China | AM | C | L | S. haemolyticus | 35 | ND | ND |
| Al-Naqshbandi et al. (2019) | Iraq | AM | ND | L | S. haemolyticus | 30 | ND | ND |
| Pfaller et al. (2020) | ND | MM | E | L | S. haemolyticus | 159 | ND | ND |
| Bensaci and Sahm (2017) | United States | MM | E | L | S. haemolyticus | 406 | ND | ND |
| Khan et al. (2017) | Qatar | AM | C | L | S. haemolyticus | 19 | ND | ND |
| Khan et al. (2017) | India | DD | C | L | S. haemolyticus | 4 | ND | ND |
| Murugesan et al. (2015) | India | DD | C | L | S. haemolyticus | 9 | ND | ND |
| Bolatchiev (2020) | Russia | DD | E | L | S. haemolyticus | 19 | ND | ND |
| Belbase et al. (2017) | Nepal | DD | C | L | S. haemolyticus | 34 | ND | ND |
| Junaidi et al. (2023) | Malaysia | DD | C | L | S. haemolyticus | 53 | ND | 61 |
| Zamanian et al. (2021) | Iran | DD | C | L | S. haemolyticus | 1,010 | ND | ND |
| Ackers-Johnson et al. (2021) | Uganda | DD | E | L | S. haemolyticus | 14 | ND | ND |
| Kang and Kim (2019) | South Korea | ND | ND | L | S. haemolyticus | 10 | ND | ND |
| Al-Habsi et al. (2020) | Oman | AM | C | L | S. haemolyticus | 2 | ND | ND |
| Skender et al. (2022) | India | MIC | C | L | S. haemolyticus | 1 | ND | ND |
| Solomon and Salaudeen (2021) | Nigeria | DD | C | L | S. haemolyticus | 7 | ND | ND |
| Saxena et al. (2019) | India | DD | C | L | S. haemolyticus | 3 | ND | ND |
| Xu et al. (2019) | China | DD | C | L | S. haemolyticus | 2 | ND | ND |
| Talapan et al. (2023) | Romania | MM | C | L | S. haemolyticus | 835 | ND | ND |
| Cavanagh et al. (2016) | Norway | MIC | E | L | S. haemolyticus | 29 | ND | ND |
| Guo et al. (2019) | China | DD | C | L | S. haemolyticus | 184 | ND | ND |
| Shittu et al. (2015) | Nigeria | DD | C | L | S. haemolyticus | 10 | ND | ND |
| Bishr et al. (2021) | Egypt | MM | C | L | S. haemolyticus | 19 | ND | 18 |
| Getaneh et al. (2021) | Ethiopia | DD | C | L | S. haemolyticus | 30 | ND | ND |
| Mutonga et al. (2019) | Kenya | AM | ND | L | S. haemolyticus | 3 | ND | ND |
| Kumar et al. (2018) | India | ND | C | L | S. haemolyticus | 29 | ND | ND |
| Belete (2020) | Ethiopia | DD | C | L | S. haemolyticus | 7 | ND | ND |
| Bhavana et al. (2019) | India | DD | C | L | S. haemolyticus | 6 | ND | ND |
| Peterside et al. (2015) | Nigeria | DD | C | L | S. haemolyticus | 27 | ND | ND |
| Al-Taweel (2020) | Iraq | DD | C | L | S. haemolyticus | 9 | ND | ND |
| Hasanvand et al. (2019) | Iran | DD | C | L | S. haemolyticus | 32 | ND | ND |
| Wangai et al. (2019) | Kenya | DD | C | L | S. haemolyticus | 29 | ND | ND |
| Lee et al. (2019) | ND | MM | C | L | S. haemolyticus | 31 | ND | ND |
| Sutter et al. (2016) | United States | DD | C | L | S. haemolyticus | 24,213 | ND | ND |
| Luo et al. (2020) | China | AM | C | L | S. haemolyticus | 67 | ND | 25 |
| Tang et al. (2020) | ND | MIC | C | L | S. haemolyticus | 21 | ND | ND |
| Suneel Kumar et al. (2021) | India | DD | C | L | S. haemolyticus | 9 | ND | ND |
| Rahimi (2016) | Iran | DD | C | L | S. haemolyticus | 87 | ND | ND |
| Mehreen et al. (2018) | Pakistan | DD | C | L | S. haemolyticus | 49 | ND | ND |
| McHardy et al. (2017) | United States | MM | C | L | S. haemolyticus | 193 | ND | ND |
| Asaad et al. (2016) | ND | AM | C | L | S. haemolyticus | 23 | ND | ND |
| Javidnia et al. (2015) | Iran | DD | C | L | S. haemolyticus | 16 | ND | ND |
| Rampelotto et al. (2022) | Brazil | MM | C | L | S. haemolyticus | 167 | ND | ND |
| Choi et al. (2019) | South Korea | AM | C | L | S. haemolyticus | 5 | ND | ND |
| Li et al. (2018) | China | MIC | C | L | S. haemolyticus | 216 | ND | ND |
| Bai et al. (2019) | China | AM | C | L | S. haemolyticus | 134 | ND | ND |
| Aguinagalde et al. (2015) | India | MIC | E | L | S. haemolyticus | ND | 190 | 199 |
| Diriba et al. (2020) | Ethiopia | DD | C | L | S. haemolyticus | 30 | 9 | ND |
| Shidiki et al. (2018) | Egypt | DD | ND | H | S. haemolyticus | 100 | ND | ND |
| Selim et al. (2022) | Saudi Arabia | DD | ND | L | S. haemolyticus | 100 | ND | ND |
| Sultan et al. (2015) | India | DD | C | L | S. haemolyticus | 32 | ND | ND |
| Manandhar et al. (2021) | Nepal | DD | C | L | S. haemolyticus | 127 | ND | ND |
| Mahfouz et al. (2023) | Egypt | DD | C | L | S. haemolyticus | 52 | 51 | 52 |
| Yang et al. (2017) | China | AM | ND | S | S. haemolyticus | 12 | 12 | 12 |
| Soroush et al. (2016) | Iran | DD | C | S | S. haemolyticus | 68 | ND | ND |
| Hailegiyorgis et al. (2018) | Ethiopia | DD | C | L | S. haemolyticus | 4 | ND | ND |
| Mesbah Elkammoshi et al. (2016) | Malaysia | DD | C | L | S. haemolyticus | 179 | ND | ND |
| Agarwal et al. (2016) | India | DD | C | L | S. haemolyticus | 10 | ND | ND |
| Mama et al. (2019) | Ethiopia | DD | C | L | S. haemolyticus | 22 | ND | ND |
| Gungor et al. (2021) | Turkey | MIC | E | L | S. haemolyticus | 36 | ND | ND |
| Ramakrishna et al. (2021) | India | DD | C | L | S. haemolyticus | 171 | ND | ND |
| Wang et al. (2017) | China | AM | C | L | S. haemolyticus | 4 | ND | ND |
| Salarvand et al. (2023) | Iran | DD | ND | L | S. haemolyticus | 88 | ND | ND |
| Firoozeh et al. (2020) | Iran | DD | C | L | S. haemolyticus | 17 | ND | ND |
| Liu et al. (2015) | China | MIC | C | L | S. haemolyticus | 116 | ND | ND |
| Fu et al. (2020) | China | AM | C | L | S. haemolyticus | 189 | ND | ND |
| Akpaka et al. (2017) | Germany | DD | C | L | S. haemolyticus | 124 | ND | ND |
| Svent-Kucina et al. (2016) | Slovenia | DD | C | L | S. haemolyticus | 8 | ND | ND |
| Goudarzi et al. (2020) | Iran | DD | C | L | S. haemolyticus | 86 | ND | ND |
| Fasihi et al. (2016) | Iran | DD | C | L | S. haemolyticus | 94 | ND | ND |
| Okuda et al. (2016) | Gabon | MIC | E | L | S. haemolyticus | 8 | ND | ND |
| Ahangarzadeh Rezaee et al. (2016) | Iran | ND | ND | L | S. haemolyticus | 104 | ND | ND |
| Biset et al. (2020) | Ethiopia | DD | C | L | S. haemolyticus | 2 | ND | ND |
| Olufunmiso et al. (2017) | Nigeria | DD | C | L | S. haemolyticus | 122 | ND | ND |
| Tahbaz et al. (2019) | Iran | DD | C | L | S. haemolyticus | 19 | ND | ND |
| Rukan et al. (2021) | Pakistan | DD | C | L | S. haemolyticus | 68 | ND | ND |
| Eibach et al. (2017) | Ghana | DD | E | S | S. haemolyticus | 14 | ND | ND |
| Dayie et al. (2021) | Ghana | DD | C | L | S. haemolyticus | 5 | ND | ND |
| Salah et al. (2021) | Yemen | AM | ND | L | S. haemolyticus | 4 | ND | ND |
| Weldu et al. (2020) | Ethiopia | DD | ND | L | S. haemolyticus | 7 | ND | ND |
| Wan et al. (2016) | Taiwan | MIC | C | L | S. haemolyticus | 274 | ND | ND |
| John et al. (2023) | Nigeria | DD | C | L | S. haemolyticus | 6 | 6 | ND |
| Duncan et al. (2016) | United States | ND | E | L | S. haemolyticus | 548 | ND | ND |
| Saini et al. (2021) | India | DD | C | L | S. haemolyticus | 14 | ND | ND |
| Sanchez et al. (2020) | Spain | ND | C | L | S. haemolyticus | 81 | ND | ND |
| Chen P. F. et al. (2021) | China | MIC | C | L | S. haemolyticus | 27 | ND | ND |
| Almohammady et al. (2020) | Egypt | DD | C | L | S. haemolyticus | 15 | ND | ND |
| Iliya et al. (2020) | Kenya | DD | C | L | S. haemolyticus | 26 | ND | ND |
| Abouelnour et al. (2019) | Egypt | DD | C | S | S. haemolyticus | 107 | ND | ND |
| Boncompain et al. (2023) | Argentina | DD | C | L | S. haemolyticus | 7 | ND | ND |
| Al-Tamimi et al. (2021) | Jordan | DD | C | L | S. haemolyticus | 57 | ND | ND |
| Ullah et al. (2022) | Pakistan | DD | C | S | S. haemolyticus | 5 | ND | ND |
| Khan et al. (2015) | Nepal | DD | C | L | S. haemolyticus | 4 | ND | ND |
| Shivappa et al. (2018) | Turkey | DD | C | L | S. haemolyticus | 7 | ND | ND |
| Muhammad et al. (2020) | Pakistan | DD | C | L | S. haemolyticus | ND | ND | 14 |
| Kahsay et al. (2018) | Ethiopia | DD | C | L | S. haemolyticus | 6 | ND | ND |
| Liang et al. (2018) | China | AM | C | L | S. haemolyticus | 26 | ND | ND |
| Zhang et al. (2015) | China | DD | C | L | S. haemolyticus | 58 | ND | ND |
| El-Kersh et al. (2016) | Saudi Arabia | AM | C | L | S. haemolyticus | 5 | ND | ND |
| Fateh Dizji et al. (2023) | Iran | DD | C | L | S. haemolyticus | 45 | ND | ND |
| Baz et al. (2021) | Egypt | DD | ND | L | S. haemolyticus | 39 | 38 | ND |
| Vijay and Dalela (2016) | India | DD | C | L | S. haemolyticus | 14 | ND | ND |
| AL-Salihi et al. (2023) | Iraq | DD | C | L | S. haemolyticus | 6 | ND | ND |
| Joachim et al. (2017) | Tanzania | DD | C | L | S. haemolyticus | 11 | ND | ND |
| Goes et al. (2021) | Brazil | DD | C | L | S. haemolyticus | 29 | ND | ND |
| Sapkota et al. (2019) | Nepal | DD | C | L | S. haemolyticus | 16 | ND | ND |
| Abdulmanea et al. (2023) | Saudi Arabia | AM | C | L | S. haemolyticus | 30 | ND | 9 |
| Adhikari et al. (2023) | Nepal | DD | C | L | S. haemolyticus | 226 | ND | ND |
| Zhou et al. (2020) | China | AM | C | L | S. haemolyticus | 17 | ND | ND |
| Kim et al. (2020) | South Korea | DD | C | L | S. haemolyticus | ND | ND | 14 |
| El-Amir et al. (2019) | Egypt | DD | C | L | S. haemolyticus | ND | ND | 2 |
| Arabestani et al. (2018) | Iran | DD | C | L | S. haemolyticus | 160 | ND | ND |
| Roden et al. (2019) | ND | ND | ND | L | S. haemolyticus | 5 | ND | ND |
| Al-Humaidan et al. (2015) | Saudi Arabia | DD | C | L | S. haemolyticus | 5 | ND | ND |
| Mansson et al. (2015) | Sweden | DD | E | L | S. haemolyticus | 6 | ND | ND |
| Garza-Gonzalez et al. (2019) | Mexico | DD | C | L | S. haemolyticus | 871 | ND | ND |
| Bhatt et al. (2016) | China | DD | C | L | S. haemolyticus | 81 | ND | ND |
| Maina et al. (2016) | Kenya | AM | C | L | S. haemolyticus | 36 | ND | ND |
| Wurster et al. (2018) | United States | ND | C | L | S. haemolyticus | 107 | ND | ND |
| Cavalcante et al. (2020) | Brazil | ND | ND | H | S. haemolyticus | 9 | ND | ND |
| Taha et al. (2019) | Sweden | DD | E | L | S. haemolyticus | 506 | ND | ND |
| Kurup and Ansari (2019) | Guyana | DD | C | L | S. haemolyticus | 14 | ND | ND |
| Kulshrestha et al. (2021) | India | DD | C | S | S. haemolyticus | 25 | ND | ND |
| Mottola et al. (2016) | Portugal | MIC | C | L | S. haemolyticus | 8 | ND | ND |
| Lenart-Boron et al. (2016) | Poland | DD | E | L | S. haemolyticus | 23 | ND | ND |
| Uyar Güleç et al. (2020) | Turkey | MIC | C | L | S. haemolyticus | 45 | ND | ND |
| Al-Qaisi and Al-Salmani (2020) | Iraq | DD | C | S | S. haemolyticus | 50 | ND | ND |
| Kpeli et al. (2016) | Ghana | ND | C | L | S. haemolyticus | 15 | ND | ND |
| Demir et al. (2020) | Turkey | DD | E | L | S. haemolyticus | 30 | ND | ND |
| Singh and Hota (2019) | India | AM | C | L | S. haemolyticus | 8 | ND | ND |
| Dilnessa and Bitew (2016) | Ethiopia | DD | C | L | S. haemolyticus | 3 | ND | ND |
| Rajkumar et al. (2017) | India | DD | C | L | S. haemolyticus | 3,058 | ND | ND |
| Hoffmann et al. (2015) | Austria | MM | E | L | S. haemolyticus | 73 | ND | 74 |
| Kumar and Shetty (2021) | India | DD | C | L | S. haemolyticus | 43 | ND | ND |
| Ahmad et al. (2020) | India | DD | C | L | S. haemolyticus | ND | ND | 3 |
| Juda et al. (2016) | Poland | DD | E | L | S. haemolyticus | 75 | ND | ND |
| Ibadin et al. (2017) | ND | DD | C | L | S. haemolyticus | 48 | ND | ND |
| Tsige et al. (2020) | Ethiopia | DD | ND | L | S. haemolyticus | 25 | ND | ND |
| Banawas et al. (2023) | Saudi Arabia | MM | ND | L | S. haemolyticus | 27 | ND | ND |
| Mascaro et al. (2019) | Italy | DD | E | L | S. aureus | 16 | ND | ND |
| Lennartz et al. (2019) | Germany | DD | E | L | S. aureus | 42 | ND | ND |
| Al Zebary et al. (2017) | Iraq | DD | NCCLS | L | S. aureus | 10 | ND | ND |
| Sakabe and Del Fiol Fde (2016) | Brazil | ND | ND | L | S. aureus | 5 | ND | ND |
| Lin et al. (2018) | China | DD | C | L | S. aureus | 28 | ND | ND |
| Doss et al. (2017) | Egypt | DD | C | L | S. aureus | 13 | 7 | 10 |
| Liang et al. (2023) | China | AM | C | L | MSSA | 127 | ND | ND |
| Oydanich et al. (2017) | United States | AM | C | L | S. aureus | 62 | ND | ND |
| Gajdacs et al. (2021) | Hungary | ND | E | S | Staphylococcus Spp | ND | ND | 67 |
| Mostafa et al. (2015) | Iran | DD | C | L | S. aureus | 95 | ND | 69 |
| Soumya et al. (2017) | India | DD | ND | S | S. epidermidis | 152 | ND | ND |
| Parastan et al. (2020) | Iran | DD | C | L | S. aureus | 93 | ND | ND |
| Farah et al. (2019) | Saudi Arabia | MIC | C | L | S. aureus | 507 | ND | ND |
| Sotoudeh Anvari et al. (2015) | Iran | DD | C | L | S. epidermidis | 13 | ND | ND |
AST method (Multiple Method, MM), Disk Diffusion (DD), Minimum Inhibitory Concentration (MIC) method, and Automated Method (AM). Publication Bias: Risk (S), Low Risk (L), High Risk (H). AST guideline: CLSI: C, EUCAST: E.
3.2. Comprehensive overview of antibiotic resistance prevalence
Among 360 reports, the proportion of erythromycin-resistant isolates was 0.573 (95% CI: 0.556–0.590), based on 144,746 resistant isolates out of 293,411 isolates tested. The heterogeneity among reports was significant (I2 = 96.09%, p = 0.001). Similarly, the proportion of clarithromycin resistance, as assessed by 30 reports involving 4,015 resistant isolates out of 8,045 tested isolates, was 0.526 (95% CI: 0.380–0.668), with significant heterogeneity between reports (I2 = 98.76%, p = 0.001). In addition, the proportion of azithromycin-resistant isolates, derived from 83 reports containing 5,227 resistant isolates out of 10,553 isolates tested, was 0.579 (95% CI: 0.514–0.641), again with significant heterogeneity between reports (I2 = 96.50%, p = 0.001).
3.2.1. Prevalence of erythromycin resistance
A total of 293,411 isolates from 721 studies were included in the erythromycin resistance analysis. The estimated mean proportion based on the random effects model was 0.573 (95% CI: 0.556–0.590). This result indicates that the mean proportion differed significantly from zero (z = 8.400, p < 0.001). The heterogeneity between studies was significant, as noted in the Q-test (Q(720) = 42,007.095, I2 = 98.29%, p < 0.001) (Table 2). A forest plot illustrating the observed results and the random effects model estimate is shown in Figure 2. Using the trim-and-fill method, the adjusted proportion was 0.501 (95% CI: 0.483–0.518). Analysis of the studentized residuals identified several studies with values greater than 3.979, suggesting potential outliers within the model. After excluding these potential outliers, the proportion was 0.501 (95% CI: 0.483–0.518). Cook’s distance analysis also indicated that several studies were overly influential. After removing these influential studies, the proportion remained unchanged at 0.501 (95% CI: 0.483–0.518). Both the rank correlation test and the regression test suggested a potential funnel plot asymmetry (p < 0.001 and p = 0.018, respectively) (Table 3).
Table 2.
Meta-analysis statistics of worldwide antibiotic resistance in Staphylococcus spp.
| Antibiotic | K (n, N) | Proportion 95%CI (LCI, HCI) | I2 | P1 | P2 |
|---|---|---|---|---|---|
| Erythromycin | 721 (144,746, 293,411) | 0.573 (0.556, 0.590) | 98.29% | p < 0.001 | p < 0.001 |
| Clarithromycin | 30 (4,015, 8,045) | 0.526 (0.380, 0.668) | 98.76% | p = 0.727 | p < 0.001 |
| Azithromycin | 83 (5,227, 10,553) | 0.579 (0.514, 0.641) | 96.50% | p = 0.017 | p < 0.001 |
K: Number of reports, n: Number of resistant isolates, N: Number of total isolates, LCI: 95% Lower Limit Confidence Interval, HCI: 95% Higher Limit Confidence Interval, P1: p-value of difference from zero resistance rate, P2: p-value of heterogeneity between reports.
Figure 2.
Forest plot of resistance rates for macrolide antibiotics against Staphylococcus: the forest plot summarizes the resistance rates of Staphylococcus species to Azithromycin, Erythromycin, and Clarithromycin across various studies. Each dot represents an individual study’s data point, with red squares indicating pooled resistance estimates and black bars showing confidence intervals.
Table 3.
Evaluation of publication bias in meta-analysis.
| Antibiotic | Egger test | Begg test | Fail and safe | Trim and Fill |
|---|---|---|---|---|
| Erythromycin | p < 0.001 | p = 0.837 | 104,799 | 0.501 (0.483, 0.518) |
| Clarithromycin | p = 0.890 | p = 0.432 | 0 | 0.526 (0.380, 0.668) |
| Azithromycin | p < 0.001 | p = 0.264 | 473 | 0.519 (0.455, 0.582) |
This table provides a comprehensive assessment of potential publication bias in the meta-analysis using a range of statistical techniques. Included are statistics generated from Egger’s Method, Begg’s Method, the Fail-Safe N (NFS), and the Trim-and-Fill Method. These methods are applied to investigate the presence of bias and its impact on the meta-analysis results, ensuring the robustness and reliability of the findings.
3.2.2. Prevalence of clarithromycin resistance
The clarithromycin resistance analysis included Eight forty-five isolates from 30 studies. The estimated average proportion based on the random-effects model was 0.526 (95%CI, 0.380, 0.668). Therefore, the average outcome was not significantly different from zero (z = 0.349, p = 0.727). According to the Q test, the outcomes were heterogeneous (Q (29) = 2347.241, I 2 = 98.76%, p < 0.001). A forest plot showing the observed outcomes and the estimate based on the random effects model is shown in Figure 2. With the fill and trim method implementation, the proportion changed to 0.526 (95%CI, 0.380, 0.668). Examination of the studentized residuals revealed that none of the studies had values greater than 3.144. Hence, there was no indication of outliers in the context of this model. According to Cook’s distance, none of the studies could be considered overly influential. Neither the rank correlation nor the regression test indicated funnel plot asymmetry (p = 0.432 and p = 0.890, respectively) (Figure 3).
Figure 3.
Funnel plots for publication bias analysis: funnel plots assessing the presence of publication bias in resistance studies for Erythromycin (left), Clarithromycin (middle), and Azithromycin (right). Symmetrical distributions indicate minimal bias, whereas asymmetries may suggest potential bias.
3.2.3. Prevalence of azithromycin resistance
The analysis of azithromycin resistance included data from 83 studies with 10,553 isolates. Using a random effects model, the estimated mean proportion was 0.579 (95% CI: 0.514, 0.641), indicating that the mean outcome differed significantly from zero (z = 2.385, p = 0.017). The heterogeneity of the outcomes was confirmed by the Q-test (Q(82) = 2342.061, I2 = 96.50%, p < 0.001). After using the fill-and-trim method, the proportion was adjusted to 0.519 (95% CI: 0.455, 0.582). Analysis of the studentized residuals showed no study exceeded a value of 3.431, indicating no outliers in the model. Furthermore, Cook’s distance analysis indicated that no single study had an undue influence on the results. While the regression test revealed funnel plot asymmetry (p < 0.001), the rank correlation test did not reveal significant asymmetry (p = 0.264).
3.3. Subgroup analysis
This section provides a detailed summary of the subgroup analyses performed on antimicrobial resistance. The full dataset is available in Table 4. The analyses examined variations in resistance rates across geographic regions, antimicrobial susceptibility testing (AST) methods, time trends, and study quality.
Table 4.
Meta-analysis statistics of worldwide antibiotic resistance in staphylococcus spp. and subgroup analysis results.
| Category | Subgroup | K (n, N) | Proportion 95%CI (LCI, HCI) | I2 | P1 | P2 | P3 |
|---|---|---|---|---|---|---|---|
| Erythromycin | |||||||
| Overall | ND | 360 (144,746, 293,411) | 0.573 (0.556, 0.590) | 96.09% | p < 0.001 | p < 0.001 | NA |
| Countries | China | 105 (11,791, 18,008) | 0.731 (0.692, 0.766) | 96.02% | p < 0.001 | p < 0.001 | p < 0.001 |
| Nepal | 24 (3,996, 6,515) | 0.620 (0.568, 0.669) | 92.18% | p < 0.001 | p < 0.001 | ||
| Rwanda | 1 (25, 138) | 0.181 (0.125, 0.254) | 0.00% | p < 0.001 | p > 0.999 | ||
| Iran | 85 (5,568, 9,107) | 0.627 (0.579, 0.671) | 93.57% | p < 0.001 | p < 0.001 | ||
| Kuwait | 4 (4,805, 11,978) | 0.421 (0.370, 0.474) | 94.75% | p = 0.004 | p < 0.001 | ||
| Ethiopia | 35 (582, 1,493) | 0.431 (0.345, 0.522) | 86.72% | p = 0.137 | p < 0.001 | ||
| India | 79 (7,667, 14,709) | 0.557 (0.514, 0.599) | 94.19% | p = 0.010 | p < 0.001 | ||
| Cameroon | 1 (111, 201) | 0.552 (0.483, 0.620) | 0.00% | p = 0.139 | p > 0.999 | ||
| South Korea | 11 (1,155, 1786) | 0.576 (0.333, 0.787) | 97.89% | p = 0.550 | p < 0.001 | ||
| Poland | 8 (333, 873) | 0.350 (0.235, 0.486) | 91.39% | p = 0.031 | p < 0.001 | ||
| Spain | 13 (12,781, 39,342) | 0.425 (0.304, 0.556) | 98.27% | p = 0.262 | p < 0.001 | ||
| Malaysia | 8 (1,587, 2070) | 0.704 (0.421, 0.886) | 98.64% | p = 0.151 | p < 0.001 | ||
| Kenya | 8 (475, 766) | 0.517 (0.323, 0.705) | 94.92% | p = 0.872 | p < 0.001 | ||
| United States | 28 (48,494, 84,187) | 0.558 (0.495, 0.618) | 99.50% | p = 0.070 | p < 0.001 | ||
| Australia | 2 (199, 477) | 0.720 (0.121, 0.979) | 93.84% | p = 0.527 | p < 0.001 | ||
| Hungary | 1 (122, 153) | 0.797 (0.726, 0.854) | 0.00% | p < 0.001 | p > 0.999 | ||
| Nigeria | 23 (857, 1,353) | 0.626 (0.523, 0.718) | 89.63% | p = 0.017 | p < 0.001 | ||
| Taiwan | 7 (2,849, 5,223) | 0.724 (0.331, 0.933) | 99.71% | p = 0.257 | p < 0.001 | ||
| Colombia | 2 (144, 353) | 0.260 (0.055, 0.681) | 94.04% | p = 0.255 | p < 0.001 | ||
| Libya | 1 (30, 32) | 0.938 (0.782, 0.984) | 0.00% | p < 0.001 | p > 0.999 | ||
| Switzerland | 4 (127, 243) | 0.536 (0.457, 0.613) | 21.30% | p = 0.377 | p = 0.283 | ||
| Pakistan | 9 (470, 762) | 0.703 (0.482, 0.857) | 95.53% | p = 0.070 | p < 0.001 | ||
| Eritrea | 2 (14, 102) | 0.159 (0.067, 0.331) | 60.43% | p < 0.001 | p = 0.112 | ||
| Oman | 2 (12, 60) | 0.194 (0.089, 0.371) | 32.07% | p = 0.002 | p = 0.225 | ||
| Croatia | 1 (523, 542) | 0.965 (0.946, 0.978) | 0.00% | p < 0.001 | p > 0.999 | ||
| Brazil | 17 (1,013, 1740) | 0.546 (0.436, 0.651) | 93.59% | p = 0.412 | p < 0.001 | ||
| Ghana | 11 (133, 833) | 0.165 (0.117, 0.226) | 74.51% | p < 0.001 | p < 0.001 | ||
| Denmark | 2 (185, 1856) | 0.182 (0.030, 0.614) | 99.08% | p = 0.134 | p < 0.001 | ||
| Japan | 2 (216, 223) | 0.966 (0.931, 0.983) | 0.00% | p < 0.001 | p = 0.431 | ||
| Philippines | 1 (3, 108) | 0.028 (0.009, 0.083) | 0.00% | p < 0.001 | p > 0.999 | ||
| Thailand | 2 (39, 43) | 0.900 (0.761, 0.962) | 0.00% | p < 0.001 | p = 0.431 | ||
| Palestinian Territories | 5 (539, 870) | 0.569 (0.452, 0.680) | 90.18% | p = 0.248 | p < 0.001 | ||
| Turkey | 10 (1,371, 2,736) | 0.626 (0.464, 0.765) | 94.97% | p = 0.127 | p < 0.001 | ||
| Canada | 1 (521, 535) | 0.974 (0.956, 0.984) | 0.00% | p < 0.001 | p > 0.999 | ||
| Israel | 2 (274, 451) | 0.358 (0.031, 0.906) | 98.19% | p = 0.687 | p < 0.001 | ||
| Jordan | 5 (124, 170) | 0.787 (0.450, 0.943) | 89.75% | p = 0.089 | p < 0.001 | ||
| Egypt | 16 (987, 1,409) | 0.788 (0.689, 0.863) | 92.58% | p < 0.001 | p < 0.001 | ||
| Iraq | 23 (749, 1,445) | 0.565 (0.470, 0.656) | 88.97% | p = 0.177 | p < 0.001 | ||
| Saudi Arabia | 19 (1,141, 4,320) | 0.610 (0.410, 0.778) | 97.77% | p = 0.279 | p < 0.001 | ||
| Portugal | 7 (295, 590) | 0.535 (0.398, 0.666) | 87.32% | p = 0.622 | p < 0.001 | ||
| Serbia | 1 (27, 50) | 0.540 (0.402, 0.672) | 0.00% | p = 0.572 | p > 0.999 | ||
| Algeria | 2 (18, 72) | 0.250 (0.164, 0.362) | 0.00% | p < 0.001 | p > 0.999 | ||
| South Africa | 5 (208, 400) | 0.530 (0.317, 0.733) | 90.36% | p = 0.788 | p < 0.001 | ||
| Argentina | 5 (86, 181) | 0.479 (0.355, 0.605) | 59.85% | p = 0.742 | p = 0.041 | ||
| Guyana | 2 (52, 72) | 0.737 (0.213, 0.967) | 92.79% | p = 0.388 | p < 0.001 | ||
| Mexico | 7 (1,448, 4,153) | 0.522 (0.408, 0.634) | 95.37% | p = 0.702 | p < 0.001 | ||
| France | 2 (106, 227) | 0.270 (0.037, 0.780) | 79.93% | p = 0.389 | p = 0.026 | ||
| Qatar | 1 (19, 20) | 0.950 (0.718, 0.993) | 0.00% | p = 0.004 | p > 0.999 | ||
| Russia | 1 (19, 27) | 0.704 (0.510, 0.844) | 0.00% | p = 0.040 | p > 0.999 | ||
| Vietnam | 5 (313, 408) | 0.763 (0.619, 0.864) | 85.59% | p < 0.001 | p < 0.001 | ||
| Afghanistan | 1 (11, 98) | 0.112 (0.063, 0.191) | 0.00% | p < 0.001 | p > 0.999 | ||
| Uganda | 4 (182, 303) | 0.621 (0.355, 0.830) | 88.22% | p = 0.375 | p < 0.001 | ||
| United Arab Emirates | 1 (1, 3) | 0.333 (0.043, 0.846) | 0.00% | p = 0.571 | p > 0.999 | ||
| Italy | 7 (664, 1,434) | 0.408 (0.301, 0.525) | 93.28% | p = 0.124 | p < 0.001 | ||
| Burkina Faso | 1 (21, 149) | 0.141 (0.094, 0.207) | 0.00% | p < 0.001 | p > 0.999 | ||
| Mozambique | 1 (84, 236) | 0.356 (0.297, 0.419) | 0.00% | p < 0.001 | p > 0.999 | ||
| Romania | 1 (835, 1,672) | 0.499 (0.475, 0.523) | 0.00% | p = 0.961 | p > 0.999 | ||
| Norway | 2 (58, 375) | 0.173 (0.068, 0.373) | 92.52% | p = 0.003 | p < 0.001 | ||
| Indonesia | 2 (139, 211) | 0.645 (0.541, 0.738) | 27.49% | p = 0.007 | p = 0.240 | ||
| Kazakhstan | 1 (1, 5) | 0.200 (0.027, 0.691) | 0.00% | p = 0.215 | p > 0.999 | ||
| Tanzania | 3 (70, 249) | 0.280 (0.133, 0.495) | 87.51% | p = 0.045 | p < 0.001 | ||
| United Kingdom | 2 (203, 631) | 0.392 (0.219, 0.596) | 77.49% | p = 0.298 | p = 0.035 | ||
| Tunisia | 2 (21, 99) | 0.215 (0.028, 0.722) | 93.70% | p = 0.258 | p < 0.001 | ||
| Uruguay | 1 (5, 100) | 0.050 (0.021, 0.115) | 0.00% | p < 0.001 | p > 0.999 | ||
| Germany | 5 (394, 1,695) | 0.283 (0.181, 0.413) | 94.22% | p = 0.002 | p < 0.001 | ||
| Slovenia | 1 (8, 274) | 0.029 (0.015, 0.057) | 0.00% | p < 0.001 | p > 0.999 | ||
| Gabon | 1 (8, 103) | 0.078 (0.039, 0.148) | 0.00% | p < 0.001 | p > 0.999 | ||
| Greece | 2 (343, 715) | 0.398 (0.217, 0.612) | 88.85% | p = 0.350 | p = 0.003 | ||
| Yemen | 1 (4, 11) | 0.364 (0.143, 0.661) | 0.00% | p = 0.372 | p > 0.999 | ||
| Austria | 2 (146, 1,098) | 0.133 (0.114, 0.154) | 0.00% | p < 0.001 | p > 0.999 | ||
| Gambia | 1 (26, 293) | 0.089 (0.061, 0.127) | 0.00% | p < 0.001 | p > 0.999 | ||
| Bangladesh | 1 (19, 29) | 0.655 (0.469, 0.803) | 0.00% | p = 0.100 | p > 0.999 | ||
| Niger | 1 (4, 10) | 0.400 (0.158, 0.703) | 0.00% | p = 0.530 | p > 0.999 | ||
| Bulgaria | 2 (296, 870) | 0.340 (0.309, 0.372) | 0.00% | p < 0.001 | p > 0.999 | ||
| Sweden | 2 (512, 572) | 0.654 (0.031, 0.991) | 98.64% | p = 0.759 | p < 0.001 | ||
| Myanmar (Burma) | 1 (86, 153) | 0.562 (0.483, 0.639) | 0.00% | p = 0.126 | p > 0.999 | ||
| Continents | Asia | 417 (44,949, 81,522) | 0.638 (0.616, 0.660) | 96.87% | p < 0.001 | p < 0.001 | p < 0.001 |
| Africa | 119 (3,856, 8,241) | 0.476 (0.423, 0.529) | 93.22% | p = 0.373 | p < 0.001 | ||
| ND | 54 (26,002, 58,611) | 0.535 (0.453, 0.616) | 99.54% | p = 0.399 | p < 0.001 | ||
| Europe | 66 (17,977, 53,239) | 0.407 (0.359, 0.456) | 97.82% | p < 0.001 | p < 0.001 | ||
| Americas | 63 (51,763, 91,321) | 0.544 (0.499, 0.588) | 99.08% | p = 0.057 | p < 0.001 | ||
| Oceania | 2 (199, 477) | 0.720 (0.121, 0.979) | 93.84% | p = 0.527 | p < 0.001 | ||
| AST Guideline | CLSI | 563 (114,948, 218,991) | 0.584 (0.565, 0.604) | 98.25% | p < 0.001 | p < 0.001 | p < 0.001 |
| EUCAST | 67 (24,762, 66,311) | 0.430 (0.382, 0.480) | 98.71% | p = 0.006 | p < 0.001 | ||
| Multiple Guideline | 8 (778, 1,415) | 0.507 (0.314, 0.697) | 97.26% | p = 0.946 | p < 0.001 | ||
| NCCLS | 6 (398, 871) | 0.353 (0.200, 0.543) | 90.72% | p = 0.128 | p < 0.001 | ||
| ND | 74 (3,686, 5,519) | 0.660 (0.601, 0.715) | 92.23% | p < 0.001 | p < 0.001 | ||
| BSAC | 1 (65, 79) | 0.823 (0.723, 0.892) | 0.00% | p < 0.001 | p > 0.999 | ||
| FMS | 1 (4, 10) | 0.400 (0.158, 0.703) | 0.00% | p = 0.530 | p > 0.999 | ||
| CASFM | 1 (105, 215) | 0.488 (0.422, 0.555) | 0.00% | p = 0.733 | p > 0.999 | ||
| AST method | Automate | 98 (9,062, 14,658) | 0.660 (0.612, 0.705) | 95.75% | p < 0.001 | p < 0.001 | p = 0.001 |
| Disk Diffusion | 452 (72,252, 128,319) | 0.557 (0.537, 0.576) | 96.69% | p < 0.001 | p < 0.001 | ||
| MIX | 73 (34,775, 77,633) | 0.566 (0.507, 0.624) | 99.44% | p = 0.028 | p < 0.001 | ||
| MIC | 59 (25,047, 65,498) | 0.568 (0.510, 0.624) | 98.98% | p = 0.023 | p < 0.001 | ||
| Species | MRSA | 212 (41,180, 58,142) | 0.710 (0.679, 0.740) | 97.67% | p < 0.001 | p < 0.001 | p < 0.001 |
| S. saprophyticus | 2 (91, 181) | 0.593 (0.320, 0.819) | 74.47% | p = 0.514 | p = 0.048 | ||
| Staphylococcus spp | 19 (955, 1997) | 0.522 (0.423, 0.619) | 92.87% | p = 0.662 | p < 0.001 | ||
| S. hominis | 5 (125, 166) | 0.751 (0.678, 0.812) | 0.00% | p < 0.001 | p = 0.448 | ||
| CoNS | 42 (4,066, 7,352) | 0.568 (0.505, 0.629) | 95.30% | p = 0.034 | p < 0.001 | ||
| S. lugdunensis | 4 (236, 1,142) | 0.313 (0.144, 0.552) | 91.74% | p = 0.121 | p < 0.001 | ||
| S. aureus | 342 (92,286, 210,496) | 0.496 (0.475, 0.516) | 98.33% | p = 0.680 | p < 0.001 | ||
| S. haemolyticus | 8 (500, 692) | 0.787 (0.544, 0.919) | 94.55% | p = 0.023 | p < 0.001 | ||
| S. epidermidis | 41 (1953, 2,818) | 0.676 (0.601, 0.744) | 90.89% | p < 0.001 | p < 0.001 | ||
| MSSA | 37 (2,868, 9,758) | 0.305 (0.221, 0.404) | 98.29% | p < 0.001 | p < 0.001 | ||
| MRCoNS | 5 (381, 488) | 0.777 (0.526, 0.916) | 94.78% | p = 0.032 | p < 0.001 | ||
| MSCoNS | 1 (10, 69) | 0.145 (0.080, 0.249) | 0.00% | p < 0.001 | p > 0.999 | ||
| VSSA | 1 (57, 61) | 0.934 (0.838, 0.975) | 0.00% | p < 0.001 | p > 0.999 | ||
| VISA | 1 (11, 11) | 0.958 (0.575, 0.997) | 0.00% | p = 0.030 | p > 0.999 | ||
| S. capitis | 1 (27, 38) | 0.711 (0.549, 0.832) | 0.00% | p = 0.012 | p > 0.999 | ||
| Coagulase | CPS | 593 (136,402, 278,468) | 0.565 (0.546, 0.584) | 98.49% | p < 0.001 | p < 0.001 | p = 0.021 |
| CoNS | 109 (7,389, 12,946) | 0.632 (0.584, 0.677) | 95.26% | p < 0.001 | p < 0.001 | ||
| ND | 19 (955, 1997) | 0.522 (0.423, 0.619) | 92.87% | p = 0.662 | p < 0.001 | ||
| year group | 2020_2023 | 379 (62,408, 148,526) | 0.550 (0.525, 0.575) | 98.32% | p < 0.001 | p < 0.001 | p = 0.002 |
| 2015_2019 | 342 (82,338, 144,885) | 0.596 (0.575, 0.616) | 97.62% | p < 0.001 | p < 0.001 | ||
| Clarithromycin | |||||||
| Overall | ND | 30 (4,015, 8,045) | 0.526 (0.380, 0.668) | 98.76% | p = 0.727 | p < 0.001 | NA |
| Countries | Canada | 2 (590, 3,348) | 0.179 (0.135, 0.234) | 92.92% | p < 0.001 | p < 0.001 | p < 0.001 |
| Japan | 4 (2,261, 2,455) | 0.660 (0.249, 0.920) | 97.28% | p = 0.462 | p < 0.001 | ||
| Egypt | 5 (105, 171) | 0.590 (0.358, 0.788) | 79.21% | p = 0.452 | p < 0.001 | ||
| Iran | 3 (28, 77) | 0.388 (0.177, 0.651) | 78.75% | p = 0.407 | p = 0.009 | ||
| India | 5 (896, 1735) | 0.612 (0.438, 0.761) | 97.37% | p = 0.205 | p < 0.001 | ||
| Kazakhstan | 1 (1, 5) | 0.200 (0.027, 0.691) | 0.00% | p = 0.215 | p > 0.999 | ||
| Nigeria | 4 (37, 56) | 0.666 (0.407, 0.852) | 55.45% | p = 0.205 | p = 0.081 | ||
| Ethiopia | 2 (17, 70) | 0.244 (0.157, 0.358) | 0.00% | p < 0.001 | p = 0.589 | ||
| China | 3 (79, 121) | 0.729 (0.490, 0.883) | 44.92% | p = 0.060 | p = 0.163 | ||
| Pakistan | 1 (1, 7) | 0.143 (0.020, 0.581) | 0.00% | p = 0.097 | p > 0.999 | ||
| Continents | Americas | 2 (590, 3,348) | 0.179 (0.135, 0.234) | 92.92% | p < 0.001 | p < 0.001 | p = 0.095 |
| Asia | 17 (3,266, 4,400) | 0.580 (0.404, 0.738) | 98.29% | p = 0.372 | p < 0.001 | ||
| Africa | 11 (159, 297) | 0.529 (0.358, 0.693) | 81.76% | p = 0.747 | p < 0.001 | ||
| AST Guideline | CLSI | 24 (3,467, 7,231) | 0.453 (0.291, 0.626) | 98.92% | p = 0.599 | p < 0.001 | p = 0.115 |
| ND | 4 (115, 137) | 0.837 (0.765, 0.889) | 0.00% | p < 0.001 | p = 0.989 | ||
| EUCAST | 2 (433, 677) | 0.640 (0.601, 0.677) | 8.00% | p < 0.001 | p = 0.297 | ||
| AST method | MIX | 3 (597, 3,355) | 0.192 (0.136, 0.263) | 91.13% | p < 0.001 | p < 0.001 | p = 0.060 |
| Disk Diffusion | 19 (707, 1,511) | 0.503 (0.385, 0.620) | 90.51% | p = 0.964 | p < 0.001 | ||
| MIC | 6 (2,696, 3,162) | 0.614 (0.352, 0.824) | 98.76% | p = 0.396 | p < 0.001 | ||
| Automate | 2 (15, 17) | 0.861 (0.619, 0.959) | 0.00% | p = 0.007 | p = 0.927 | ||
| Species | MRSA | 6 (576, 2,353) | 0.607 (0.269, 0.867) | 98.70% | p = 0.552 | p < 0.001 | p = 0.582 |
| S. aureus | 12 (2,630, 3,066) | 0.632 (0.422, 0.802) | 97.35% | p = 0.216 | p < 0.001 | ||
| MSSA | 2 (560, 2,167) | 0.273 (0.154, 0.436) | 98.16% | p = 0.008 | p < 0.001 | ||
| S. epidermidis | 3 (15, 46) | 0.560 (0.113, 0.927) | 82.89% | p = 0.837 | p = 0.003 | ||
| CoNS | 3 (199, 335) | 0.320 (0.074, 0.735) | 93.00% | p = 0.404 | p < 0.001 | ||
| Staphylococcus spp | 3 (29, 57) | 0.439 (0.132, 0.802) | 85.03% | p = 0.772 | p = 0.001 | ||
| S. lugdunensis | 1 (6, 21) | 0.286 (0.134, 0.508) | 0.00% | p = 0.058 | p > 0.999 | ||
| Coagulase | CPS | 20 (3,766, 7,586) | 0.581 (0.398, 0.745) | 99.15% | p = 0.385 | p < 0.001 | p = 0.570 |
| CoNS | 7 (220, 402) | 0.392 (0.180, 0.655) | 89.36% | p = 0.426 | p < 0.001 | ||
| ND | 3 (29, 57) | 0.439 (0.132, 0.802) | 85.03% | p = 0.772 | p = 0.001 | ||
| Year Group | 2020_2023 | 17 (946, 3,990) | 0.405 (0.281, 0.543) | 96.40% | p = 0.177 | p < 0.001 | p = 0.032 |
| 2015_2019 | 13 (3,069, 4,055) | 0.674 (0.467, 0.830) | 98.65% | p = 0.098 | p < 0.001 | ||
| Azithromycin | |||||||
| Overall | ND | 83 (5,227, 10,553) | 0.579 (0.514, 0.641) | 96.50% | p = 0.017 | p < 0.001 | NA |
| Countries | United States | 6 (630, 1,511) | 0.452 (0.296, 0.618) | 96.64% | p = 0.577 | p < 0.001 | p = 0.009 |
| Nepal | 2 (94, 162) | 0.554 (0.402, 0.696) | 65.84% | p = 0.487 | p = 0.087 | ||
| Spain | 2 (170, 883) | 0.348 (0.033, 0.894) | 99.34% | p = 0.656 | p < 0.001 | ||
| India | 17 (1910, 3,360) | 0.575 (0.458, 0.685) | 96.84% | p = 0.207 | p < 0.001 | ||
| China | 8 (916, 1,137) | 0.768 (0.569, 0.893) | 94.57% | p = 0.011 | p < 0.001 | ||
| Brazil | 2 (65, 108) | 0.808 (0.050, 0.997) | 94.54% | p = 0.520 | p < 0.001 | ||
| Egypt | 6 (92, 149) | 0.609 (0.417, 0.773) | 57.17% | p = 0.262 | p = 0.040 | ||
| Pakistan | 5 (64, 75) | 0.831 (0.722, 0.903) | 0.00% | p < 0.001 | p = 0.746 | ||
| Bangladesh | 6 (88, 182) | 0.500 (0.398, 0.601) | 41.23% | p = 0.993 | p = 0.130 | ||
| Iran | 11 (469, 805) | 0.563 (0.475, 0.648) | 80.97% | p = 0.160 | p < 0.001 | ||
| Iraq | 3 (108, 150) | 0.770 (0.306, 0.962) | 92.89% | p = 0.243 | p < 0.001 | ||
| Saudi Arabia | 2 (45, 93) | 0.481 (0.060, 0.930) | 96.42% | p = 0.954 | p < 0.001 | ||
| Malaysia | 1 (61, 209) | 0.292 (0.234, 0.357) | 0.00% | p < 0.001 | p > 0.999 | ||
| Kazakhstan | 1 (1, 5) | 0.200 (0.027, 0.691) | 0.00% | p = 0.215 | p > 0.999 | ||
| Indonesia | 1 (12, 22) | 0.545 (0.341, 0.735) | 0.00% | p = 0.670 | p > 0.999 | ||
| South Africa | 1 (66, 89) | 0.742 (0.641, 0.822) | 0.00% | p < 0.001 | p > 0.999 | ||
| Austria | 2 (148, 1,098) | 0.135 (0.116, 0.156) | 0.00% | p < 0.001 | p > 0.999 | ||
| South Korea | 1 (14, 25) | 0.560 (0.366, 0.737) | 0.00% | p = 0.549 | p > 0.999 | ||
| Australia | 1 (58, 63) | 0.921 (0.823, 0.967) | 0.00% | p < 0.001 | p > 0.999 | ||
| Hungary | 2 (94, 172) | 0.533 (0.209, 0.830) | 95.14% | p = 0.861 | p < 0.001 | ||
| Continents | Americas | 8 (695, 1,619) | 0.493 (0.345, 0.643) | 95.81% | p = 0.929 | p < 0.001 | p = 0.013 |
| Asia | 58 (3,782, 6,225) | 0.604 (0.540, 0.666) | 94.36% | p = 0.002 | p < 0.001 | ||
| Europe | 6 (412, 2,153) | 0.311 (0.149, 0.537) | 98.29% | p = 0.098 | p < 0.001 | ||
| ND | 3 (122, 255) | 0.466 (0.053, 0.932) | 97.70% | p = 0.923 | p < 0.001 | ||
| Africa | 7 (158, 238) | 0.641 (0.485, 0.772) | 66.45% | p = 0.076 | p = 0.007 | ||
| Oceania | 1 (58, 63) | 0.921 (0.823, 0.967) | 0.00% | p < 0.001 | p > 0.999 | ||
| AST Guideline | CLSI | 67 (4,179, 7,351) | 0.590 (0.528, 0.649) | 94.82% | p = 0.005 | p < 0.001 | p = 0.111 |
| ND | 8 (227, 430) | 0.705 (0.388, 0.900) | 94.99% | p = 0.198 | p < 0.001 | ||
| Multiple Guideline | 1 (26, 60) | 0.433 (0.315, 0.560) | 0.00% | p = 0.303 | p > 0.999 | ||
| EUCAST | 7 (795, 2,712) | 0.363 (0.163, 0.625) | 99.12% | p = 0.304 | p < 0.001 | ||
| AST Method | MIX | 9 (736, 1857) | 0.668 (0.479, 0.815) | 97.25% | p = 0.080 | p < 0.001 | p = 0.121 |
| Disk Diffusion | 53 (2,265, 4,274) | 0.553 (0.481, 0.622) | 93.39% | p = 0.151 | p < 0.001 | ||
| MIC | 6 (1,022, 1,601) | 0.663 (0.564, 0.750) | 89.68% | p = 0.002 | p < 0.001 | ||
| Automate | 8 (875, 1,098) | 0.748 (0.483, 0.904) | 95.80% | p = 0.065 | p < 0.001 | ||
| Species | MRSA | 23 (1,353, 2,733) | 0.637 (0.528, 0.733) | 95.45% | p = 0.014 | p < 0.001 | p = 0.074 |
| mrCoNS | 1 (120, 147) | 0.816 (0.745, 0.871) | 0.00% | p < 0.001 | p > 0.999 | ||
| S. lugdunensis | 1 (21, 28) | 0.750 (0.561, 0.876) | 0.00% | p = 0.012 | p > 0.999 | ||
| S. aureus | 40 (2,907, 6,072) | 0.546 (0.442, 0.645) | 97.45% | p = 0.387 | p < 0.001 | ||
| MSSA | 3 (157, 533) | 0.185 (0.067, 0.417) | 94.30% | p = 0.011 | p < 0.001 | ||
| S. epidermidis | 5 (157, 283) | 0.509 (0.338, 0.678) | 81.37% | p = 0.917 | p < 0.001 | ||
| CoNS | 6 (407, 567) | 0.767 (0.571, 0.891) | 91.58% | p = 0.010 | p < 0.001 | ||
| Staphylococcus spp | 4 (105, 190) | 0.562 (0.296, 0.797) | 88.15% | p = 0.660 | p < 0.001 | ||
| Coagulase | CPS | 66 (4,417, 9,338) | 0.558 (0.485, 0.629) | 96.90% | p = 0.121 | p < 0.001 | p = 0.312 |
| CoNS | 13 (705, 1,025) | 0.679 (0.563, 0.777) | 88.70% | p = 0.003 | p < 0.001 | ||
| ND | 4 (105, 190) | 0.562 (0.296, 0.797) | 88.15% | p = 0.660 | p < 0.001 | ||
| Year Group | 2015_2019 | 44 (3,537, 7,509) | 0.584 (0.492, 0.671) | 97.55% | p = 0.073 | p < 0.001 | p = 0.901 |
| 2020_2023 | 39 (1,690, 3,044) | 0.569 (0.483, 0.651) | 93.20% | p = 0.117 | p < 0.001 | ||
K: Number of reports, n: Number of resistant isolates, N: Number of total isolates, LCI: 95% Lower Limit Confidence Interval, HCI: 95% Higher Limit Confidence Interval, P1: p-value of difference from zero resistance rate, P2: p-value of heterogeneity between reports, P3: p-value of difference between groups.
3.3.1. Subgroup analysis based on countries
Subgroup analysis revealed statistically significant differences in antimicrobial resistance prevalence between countries for azithromycin, clarithromycin, and erythromycin. Austria had the lowest resistance rate for azithromycin, with a prevalence of 13.5%, while Australia had the highest resistance rate at 92.1%. Pakistan had the lowest resistance rate (14.3%) for clarithromycin, while China had the highest (72.9%). The Philippines had the lowest resistance rate of 2.8% for erythromycin, while Canada had the highest resistance rate of 97.4% (Figure 4).
Figure 4.
Global prevalence of antibiotic resistance in Staphylococcus: maps showing the worldwide prevalence of resistance to Erythromycin (A), Clarithromycin (B), and Azithromycin (C). Regions with higher resistance proportions are highlighted in warmer colors (e.g., red), while areas with lower resistance rates are shown in cooler tones (e.g., green).
3.3.2. Subgroup analysis based on continents
Subgroup analysis revealed statistically significant differences in antimicrobial resistance prevalence between continents, particularly for azithromycin and erythromycin. Europe had the lowest resistance rate for azithromycin, with a prevalence of 31.1%, while Oceania had the highest resistance rate of 92.1%. Similarly, Europe had the lowest resistance rate for erythromycin, with a prevalence of 40.7%, while Oceania had the highest resistance rate at 72% (Figure 5A).
Figure 5.
subgroup analysis results were illustrated in figures (A) compression of the prevalence of antibiotic-resistant staphylococcus isolates between continents; (B) Compression of the prevalence of antibiotic-resistant staphylococcus isolates between AST guideline; (C) Compression of the prevalence of staphylococcus isolates AST method; (D) Compression of the prevalence of antibiotic-resistant staphylococcus isolates based on species (E) Compression of the prevalence of antibiotic-resistant staphylococcus isolates based on coagulase; (F) Compression of the prevalence of staphylococcus isolates before and after 2020.
3.3.3. Subgroup analysis based on AST guideline
The subgroup analysis identified statistically significant differences in antibiotic resistance prevalence, including erythromycin, between different antimicrobial susceptibility testing (AST) guidelines. For erythromycin, the NCCLS guideline showed the lowest resistance rate with a prevalence of 35.3%, while the BSAC guideline showed the highest resistance rate at 82.3% (Figure 5B).
3.3.4. Subgroup analysis based on the AST method
Subgroup analysis revealed a statistically significant disparity in the prevalence of antibiotic resistance, including erythromycin, among the various AST methods. For erythromycin, the AST method with the lowest resistance rate was Disk Diffusion, with a prevalence of 55.7%. Conversely, the AST method, with the highest resistance rate, was automated, with a prevalence rate of 66% (Figure 5C).
3.3.5. Subgroup analysis based on species
Subgroup analysis revealed statistically significant differences in antibiotic resistance prevalence among different species, including erythromycin. For erythromycin, MSCoNS had the lowest resistance rate with a prevalence of 14.5%, while VISA had the highest resistance rate with a prevalence of 95.8% (Figure 5D).
3.3.6. Subgroup analysis based on coagulase
Subgroup analysis revealed statistically significant differences in the prevalence of antibiotic resistance, including erythromycin, among different coagulase types. For erythromycin, the coagulase type with the lowest resistance rate was ND, with a prevalence of 52.2%. In contrast, the highest resistance rate was observed for CoNS, with a prevalence of 63.2% (Figure 5E).
3.3.7. Subgroup analysis based on year-group
The subgroup analysis identified statistically significant differences in antibiotic resistance prevalence among different groups, including clarithromycin and erythromycin. For clarithromycin, the period with the lowest resistance rate was 2020–2023, with a prevalence of 40.5%, while the highest resistance rate was observed in 2015–2019, with a prevalence of 67.4%. Similarly, for erythromycin, the lowest resistance rate occurred during 2020–2023, with a prevalence of 55%, while the highest resistance rate was observed during 2015–2019, with a prevalence of 59.6% (Figure 5F).
3.4. Meta-regression
Meta-regression analysis was performed to examine the relationship between antimicrobial resistance rates and year of reporting. No statistically significant correlation was observed for erythromycin (r = −0.041, p-value = 0.007, 95% CI [−0.071, −0.011]) (Figure 6A). Similarly, the correlation was not statistically significant for clarithromycin (r = −0.123, p-value = 0.263, 95% CI [−0.339, 0.093]) (Figure 6B). These results suggest that resistance rates for azithromycin and clarithromycin remained relatively stable over the study period. In contrast, a statistically significant positive correlation was observed for azithromycin (r = 0.005, p-value = 0.929, 95% CI [−0.1, 0.11]) (Figure 6C), indicating an upward trend in erythromycin resistance rates over time.
Figure 6.
Trends in antibiotic resistance over time (2015–2023): meta-regression analysis plots the trends of resistance proportions for: (A) Erythromycin, showing a slight but statistically significant decline. (B) Clarithromycin, demonstrating a non-significant downward trend. (C) Azithromycin, with no significant trend observed. Data points represent study-specific resistance proportions over time, with bubble sizes reflecting sample size.
4. Discussion
This systematic review and meta-analysis thoroughly evaluated the prevalence and trends of macrolide resistance in Staphylococcus species, explicitly focusing on resistance to erythromycin, clarithromycin, and azithromycin. By analyzing data from 207 studies conducted in 76 countries between 2015 and 2023, our findings provide valuable insights into global patterns of macrolide resistance in Staphylococcus species. Erythromycin, the first macrolide antibiotic discovered, remains effective in treating minor skin infections caused by penicillin-resistant S. aureus strains (Washington and Wilson, 1985). This meta-analysis revealed that erythromycin was the most commonly tested macrolide in antibiotic susceptibility studies, with data from 207 studies in 76 countries. The pooled prevalence of resistance was 57.3%, with significant heterogeneity between studies (I2 = 96.09%, p < 0.001). Evidence of publication bias was also detected using Egger’s test (p < 0.001), resulting in an adjusted pooled prevalence of 50.1% after Fill and Trim analysis. These variations may be due to differences in study populations, periods, sampling methods, or clinical specimen types.
Subgroup analyses revealed significant regional differences in erythromycin resistance rates. Oceania had the highest resistance rate (72%, based on two reports), while Asia contributed the most studies (417 reports) with a pooled prevalence of 63.8%. In particular, China, Iran, and India reported resistance rates of 73.1, 62.7, and 55.7%, respectively, based on 105, 85, and 79 reports. In contrast, Europe had the lowest pooled prevalence of erythromycin-resistant isolates (40.7%, 44 reports), with Spain (13 reports) and Poland (8 reports) reporting prevalence rates of 42.5 and 35%, respectively. The lower resistance rates in Europe reflect increased public awareness and effective public health interventions to curb antimicrobial resistance.
On the other hand, prevalence rates of over 90% for erythromycin-resistant isolates in countries such as Qatar, Canada, Libya, Japan, and Croatia raise significant concerns. However, because these findings are based on AST performed at a single clinical center in each country, the results cannot be generalized to the entire population in these regions. This underscores the need for comprehensive national surveillance systems to monitor antimicrobial resistance in these areas.
Subgroup analysis by species revealed a pooled prevalence of erythromycin resistance in 49.6% of S. aureus isolates (342 reports). In addition, some studies included in this meta-analysis reported erythromycin resistance rates for S. aureus in two subgroups: MSSA (methicillin-susceptible S. aureus) and MRSA. The prevalence of resistance was significantly higher in MRSA than in MSSA (71% vs. 30.5%). However, more studies have focused on MRSA than MSSA (212 vs. 37). These findings are consistent with other meta-analyses that have reported pooled prevalence rates of erythromycin-resistant S. aureus isolates (Eshetie et al., 2016; Khanal et al., 2021; Chelkeba et al., 2022; Chelkeba and Melaku, 2022; Ezeh et al., 2023; Xu et al., 2024). However, most of these studies were based on data from one African country and had fewer studies than ours. Moreover, Chelkeba et al. (2022) and Chelkeba and Melaku (2022), during two separate meta-analyses conducted in Ethiopia, reported 50 and 45% prevalence rates for erythromycin-resistant S. aureus isolates in women with bacteriuria and patients with wound infections, respectively. In a meta-analysis review, Ezeh et al. (2023) reported a prevalence rate of 47% for erythromycin-resistant S. aureus isolates in Nigeria (66 reports) up to 2022. However, data from our meta-analysis highlighted a higher prevalence of erythromycin resistance in Nigeria (23 reports) than in Ezeh et al. (2023) (62.6% vs. 47%). The observed discrepancy in prevalence rates may be due to differences in the periods and number of studies included in these two meta-analyses. Subgroup analysis by species revealed a high pooled prevalence of erythromycin resistance among CoNS isolates at 56.8% (based on 42 reports). In addition, some studies independently reported the frequency of specific CoNS species, allowing pooled prevalence rates to be calculated for each species. Among these, S. epidermidis was the most commonly studied CoNS species (41 reports), with a pooled erythromycin resistance prevalence of 67.7%. Similar to our findings, Deyno et al. (2018) also reviewed the prevalence of antimicrobial resistance among clinical isolates of CoNS in Ethiopia through 2016, reporting a 30% prevalence of erythromycin-resistant CoNS. The discrepancy between our findings and Deyno et al. (2018) may be due to differences in the periods and geographic regions covered by these two meta-analyses. Specifically, our meta-analysis included data collected between 2015 and 2023, whereas Deyno et al. (2018) focused on data up to 2016. Furthermore, our study provided a global overview of antimicrobial resistance prevalence, whereas Deyno et al. (2018) limited their analysis to Ethiopia.
In addition, five studies reported a resistance prevalence of 77.7% among [methicillin-resistant Coagulase-Negative Staphylococci (MRCoNS)], which was significantly higher than the 14.5% reported in a single survey of MSCoNS. However, due to the unequal number of studies, this comparison lacks balance, and further research is needed to make a comprehensive and accurate comparison.
Overall, the prevalence of MRCoNS was significantly lower than that of MRSA. This difference may be attributed to the lower frequency of CoNS infections than S. aureus infections, reducing antimicrobial exposure. However, CoNS have transitioned from being non-pathogenic to emerging as pathogenic strains, potentially acquiring resistance genes from S. aureus (Yu et al., 2017).
In contrast, the prevalence of erythromycin resistance decreased slightly over time, from 59.6% in 2015–2019 to 55% in 2020–2023. This decline may reflect increased national efforts to combat antimicrobial resistance and the implementation of updated treatment guidelines and surveillance systems in developed countries. Similarly, a meta-analysis by Xu et al. (2024), found no significant change in erythromycin-resistant S. aureus isolates from Cystic fibrosis patients when comparing the periods 2008–2015 and 2015–2021.
Based on AST guidelines, the subgroup analysis showed higher resistance levels in the CLSI group compared to the EUCAST group (58.4% vs. 43%). However, this finding may be influenced by more studies using CLSI guidelines (563) compared to EUCAST guidelines (67 studies). Both guidelines are widely used but differ in their breakpoints for determining resistance. For example, EUCAST defines resistance as MIC >1, whereas CLSI uses MIC ≥8. Similarly, EUCAST considers a zone diameter of <21 mm resistant, while CLSI uses a zone diameter of ≤13 mm. These differences and variations in the number of studies likely contributed to the observed differences in erythromycin resistance prevalence.
This meta-analysis found fewer studies evaluated susceptibility testing for azithromycin and clarithromycin than erythromycin. It may be due to the limited clinical use of azithromycin and clarithromycin for treating staphylococcal infections compared to erythromycin. The pooled prevalence of azithromycin resistance was similar to that of erythromycin (57.3% vs. 57.9%). However, significant heterogeneity between studies was observed (I2 = 96.5%, p < 0.001), and Egger’s test indicated potential publication bias (p < 0.001). After applying fill and trim analysis, the pooled prevalence of azithromycin resistance was adjusted to 51.9%.
The highest resistance rates were reported in Oceania (92.1%, based on one report), while most studies (58 reports) were conducted in Asia, with a pooled prevalence of 60.4%. Specifically, India and Iran contributed 17 and 11 reports, respectively, with 57.5 and 56.3% resistance prevalence rates. Like erythromycin, Europe had the lowest prevalence of azithromycin resistance (31.1%, based on six studies). This low prevalence may be due to the limited number of European studies and the infrequent use of azithromycin to treat staphylococcal infections in this region. Alarmingly, high levels of azithromycin-resistant isolates were identified in Pakistan, Brazil, and China.
Subgroup analysis by species showed that S. aureus was the most commonly studied species, with a pooled resistance prevalence of 54.6% (40 reports). In addition, 23 studies reported a high prevalence of azithromycin resistance among MRSA isolates (63.7%), compared with only three studies evaluating MSSA isolates, which showed a much lower resistance prevalence of 18.5%. However, this comparison was biased due to the unequal number of studies. Subgroup analysis by the AST method showed that disc diffusion was the most commonly used method for antibiotic susceptibility testing, probably because of its accessibility and widespread acceptance. However, the highest prevalence of azithromycin resistance was associated with the automated method (74.8%, based on eight reports). Like erythromycin, the prevalence of azithromycin resistance decreased slightly over time, from 58.4% in 2015–2019 to 56.9% in 2020–2023.
Clarithromycin was the third macrolide antibiotic studied in this meta-analysis, with a pooled resistance prevalence of 52.6%; however, there was considerable heterogeneity between studies (I2 = 98.76%, p < 0.001). Most of the reports (17) were from Asia, with a pooled prevalence of 58%. S. aureus was the dominant species, with a resistance prevalence of 63.2%; six studies showed a prevalence rate of 60.7% among MRSA isolates and 27.3% among MSSA isolates (two reports). In contrast to erythromycin and azithromycin, the prevalence of resistance to clarithromycin decreased significantly over different periods (67.4% from 2015 to 2019 and 40.5% from 2020 to 2023).
Clarithromycin, the third macrolide antibiotic examined in this meta-analysis, had a pooled resistance prevalence of 52.6%, although significant heterogeneity between studies was observed (I2 = 98.76%, p < 0.001). Most reports (17 studies) were from Asia, with a pooled resistance prevalence of 58%. S. aureus was the predominant species, with a resistance prevalence of 63.2%. Among MRSA isolates, six studies reported a resistance prevalence of 60.7%, while MSSA isolates had a lower prevalence of 27.3% (based on two reports). In contrast to erythromycin and azithromycin, clarithromycin resistance decreased significantly over time, from 67.4% in 2015–2019 to 40.5% in 2020–2023.
This meta-analysis is the first to compare the prevalence of resistance to azithromycin and clarithromycin in Staphylococcus species. As a result, no previous meta-analyses have provided comparable global results.
A significant limitation of this study is the lack of differentiation between Staphylococcus species isolated from healthcare and community settings. This distinction is critical, as antibiotic resistance rates in healthcare settings are typically higher than in the community. Another limitation is the lack of data on resistance to newer macrolides, primarily due to the limited number of studies investigating them. This gap highlights the need for further research to provide accurate and comprehensive evidence.
5. Conclusion
This meta-analysis highlights a relatively high prevalence of macrolide resistance in S. aureus and CoNS isolates worldwide. These elevated resistance rates underscore the importance of regular epidemiologic surveillance of antimicrobial resistance and the implementation of stewardship programs. Most of the studies included in this analysis were conducted in Asia, while Europe had the lowest macrolide resistance rate. In addition, resistance to erythromycin and azithromycin remained relatively stable between 2015–2019 and 2020–2023. Nevertheless, antimicrobial susceptibility testing before treatment is recommended, and further research into the molecular and genetic mechanisms of macrolide resistance is strongly encouraged.
Funding Statement
The author(s) declare that no financial support was received for the research and/or publication of this article.
Data availability statement
The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding authors.
Author contributions
TN: Data curation, Writing – original draft, Writing – review & editing. AZ: Supervision, Writing – original draft, Writing – review & editing. EP: Investigation, Project administration, Writing – original draft. MM: Investigation, Resources, Visualization, Writing – review & editing. NG: Project administration, Validation, Writing – original draft. MB: Investigation, Methodology, Project administration, Writing – original draft. MS: Formal analysis, Software, Supervision, Writing – original draft.
Conflict of interest
AZ was employed by Quality Control Department of Temad Mfg, Co.
The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Generative AI statement
The author(s) declare that no Generative AI was used in the creation of this manuscript.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
References
- Abbasi M., BaseriSalehi M., Bahador N., Taherikalani M. (2017). Antibiotic resistance patterns and virulence determinants of different SCCmec and Pulsotypes of Staphylococcus Aureus isolated from a major Hospital in Ilam, Iran. Open Microbiol. J. 11, 211–223. doi: 10.2174/1874285801711010211, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Abdulmanea A. A., Alharbi N. S., Somily A. M., Khaled J. M., Algahtani F. H. (2023). The prevalence of the virulence genes of Staphylococcus aureus in sickle cell disease patients at KSUMC, Riyadh, Saudi Arabia. Antibiotics (Basel) 12:1221. doi: 10.3390/antibiotics12071221, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Abebe A. A., Birhanu A. G. (2023). Methicillin resistant Staphylococcus aureus: molecular mechanisms underlying drug resistance development and novel strategies to combat. Infect Drug. Resist. 16, 7641–7662. doi: 10.2147/IDR.S428103, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Abouelnour A., Zaki M., Hassan R., Elkannishy S. (2019). Phenotypic and genotypic identification of Staphylococcus aureus resistant to clindamycin in Mansoura university children hospital, Egypt. Afr. J. Clin. Exp. Microbiol. 21, 30–35. doi: 10.4314/ajcem.v21i1.4 [DOI] [Google Scholar]
- Ackers-Johnson G., Kibombo D., Kusiima B., Nsubuga M. L., Kigozi E., Kajumbula H. M., et al. (2021). Antibiotic resistance profiles and population structure of disease-associated Staphylococcus aureus infecting patients in Fort Portal regional referral hospital, Western Uganda. Microbiology (Reading) 167:001000. doi: 10.1099/mic.0.001000, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Adhikari P., Basyal D., Rai J. R., Bharati L., Budthapa A., Gharti K. P., et al. (2023). Prevalence, antimicrobial susceptibility pattern and multidrug resistance of methicillin-resistant Staphylococcus aureus isolated from clinical samples at a tertiary care teaching hospital: an observational, cross-sectional study from the Himalayan country, Nepal. BMJ Open 13:e067384. doi: 10.1136/bmjopen-2022-067384, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Agarwal L., Singh A. K., Agarwal A., Agarwal A. (2016). Methicillin and mupirocin resistance in nasal colonizers coagulase-negative Staphylococcus among health care workers. Med. J. Dr. DY Patil Univ. 9, 479–483. doi: 10.4103/0975-2870.186070 [DOI] [Google Scholar]
- Aguinagalde L., Diez-Martinez R., Yuste J., Royo I., Gil C., Lasa I., et al. (2015). Auranofin efficacy against MDR Streptococcus pneumoniae and Staphylococcus aureus infections. J. Antimicrob. Chemother. 70, 2608–2617. doi: 10.1093/jac/dkv163, PMID: [DOI] [PubMed] [Google Scholar]
- Ahangarzadeh Rezaee M., Mirkarimi S. F., Hasani A., Sheikhalizadeh V., Soroush M. H., Abdinia B. (2016). Molecular typing of Staphylococcus aureus isolated from clinical specimens during an eight-year period (2005–2012) in Tabriz, Iran. Arch. Pediatr. Infect. Dis. 4:e35563. doi: 10.5812/pedinfect.35563 [DOI] [Google Scholar]
- Ahmad M., Kumar P., Sultan A., Akhtar A., Chaudhary B., Khan F. (2020). Prevalence of community acquired Uropathogens and their antimicrobial susceptibility in patients from the urology unit of a tertiary care medical center. J. Pure Appl. Microbiol. 14, 2009–2015. doi: 10.22207/JPAM.14.3.40 [DOI] [Google Scholar]
- Akbariyeh H., Nahaei M. R., Hasani A., Pormohammad A. (2017). Intrinsic and acquired methicillin-resistance detection in Staphylococcus aureus and its relevance in therapeutics. Arch. Pediatr. Infect. Dis. 5:e39185. doi: 10.5812/pedinfect.39185 [DOI] [Google Scholar]
- Akpaka P. E., Roberts R., Monecke S. (2017). Molecular characterization of antimicrobial resistance genes against Staphylococcus aureus isolates from Trinidad and Tobago. J. Infect. Public Health 10, 316–323. doi: 10.1016/j.jiph.2016.05.010, PMID: [DOI] [PubMed] [Google Scholar]
- Al Zebary M. K., Yousif S. Y., Assafi M. S. (2017). The prevalence, molecular characterization and antimicrobial susceptibility of isolated from impetigo cases in Duhok, Iraq. Open Dermatol. J. 11, 22–29. doi: 10.2174/1874372201711010022 [DOI] [Google Scholar]
- Al-Habsi T. H. A., Al-Lamki R. N. A., Mabruk M. (2020). Antibiotic susceptibility pattern of bacterial isolates from wound infections among patients attending a tertiary care hospital in Oman. Biomed. Pharma. J. 13, 2069–2080. doi: 10.13005/bpj/2087 [DOI] [Google Scholar]
- Al-Humaidan O. S., El-Kersh T. A., Al-Akeel R. A. (2015). Risk factors of nasal carriage of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus among health care staff in a teaching hospital in Central Saudi Arabia. Saudi Med. J. 36, 1084–1090. doi: 10.15537/smj.2015.9.12460, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Almasri M., Abu Hasan N., Sabbah N. (2016). Macrolide and lincosamide resistance in staphylococcal clinical isolates in Nablus, Palestine. Turk. J. Med. Sci. 46, 1064–1070. doi: 10.3906/sag-1503-121, PMID: [DOI] [PubMed] [Google Scholar]
- Almohammady M. N., Eltahlawy E. M., Reda N. M. (2020). Pattern of bacterial profile and antibiotic susceptibility among neonatal sepsis cases at Cairo University children hospital. J. Taibah Univ. Med. Sci. 15, 39–47. doi: 10.1016/j.jtumed.2019.12.005, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Al-Naqshbandi A. A., Chawsheen M. A., Abdulqader H. H. (2019). Prevalence and antimicrobial susceptibility of bacterial pathogens isolated from urine specimens received in rizgary hospital—Erbil. J. Infect. Public Health 12, 330–336. doi: 10.1016/j.jiph.2018.11.005, PMID: [DOI] [PubMed] [Google Scholar]
- Al-Qaisi M. M., Al-Salmani T. S. (2020). Phenotypic detection of macrolide-Lincosamide-Streptogramin resistance among Staphylococcus aureus and Staphylococcus epidermidis in Baghdad, Iraq. Int. J. Drug Deliv. Technol. 10, 431–436. doi: 10.25258/ijddt.10.3.22 [DOI] [Google Scholar]
- AL-Salihi S. S., Karim G. F., Al-Bayati A., Obaid H. M. (2023). Prevalence of methicillin-resistant and methicillin sensitive Staphylococcus aureus nasal carriage and their antibiotic resistant patterns in Kirkuk City, Iraq. J. Pure Appl. Microbiol. 17, 329–337. doi: 10.22207/JPAM.17.1.22 [DOI] [Google Scholar]
- Al-Tamimi M., Himsawi N., Abu-Raideh J., Khasawneh A. I., Jazar D. A., Al-Jawaldeh H., et al. (2021). Phenotypic and molecular screening of Nasal S. aureus from adult hospitalized patients for methicillin- and vancomycin-resistance. Infect. Disord. Drug Targets 21, 68–77. doi: 10.2174/1871526520666200109143158, PMID: [DOI] [PubMed] [Google Scholar]
- Al-Taweel R. S. (2020). Bacterial contamination of stethoscopes. Biochem. Cell. Arch. 20:6187. [Google Scholar]
- An N. V., Hai L. H. L., Luong V. H., Vinh N. T. H., Hoa P. Q., Hung L. V., et al. (2024). Antimicrobial resistance patterns of Staphylococcus Aureus isolated at a general Hospital in Vietnam between 2014 and 2021. Infect. Drug Resist. 17, 259–273. doi: 10.2147/IDR.S437920, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Arabestani M. R., Rastiyani S., Alikhani M. Y., Mousavi S. F. (2018). The relationship between prevalence of antibiotics resistance and virulence factors genes of MRSA and MSSA strains isolated from clinical samples, West Iran. Oman Med. J. 33, 134–140. doi: 10.5001/omj.2018.25, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Asaad A. M., Ansar Qureshi M., Mujeeb Hasan S. (2016). Clinical significance of coagulase-negative staphylococci isolates from nosocomial bloodstream infections. Infect Dis. (Lond) 48, 356–360. doi: 10.3109/23744235.2015.1122833, PMID: [DOI] [PubMed] [Google Scholar]
- Asbell P. A., Sanfilippo C. M., Pillar C. M., DeCory H. H., Sahm D. F., Morris T. W. (2015). Antibiotic resistance among ocular pathogens in the United States five-year results from the antibiotic resistance monitoring in ocular microorganisms (ARMOR) surveillance study. JAMA Ophthalmol. 133, 1445–1454. doi: 10.1001/jamaophthalmol.2015.3888, PMID: [DOI] [PubMed] [Google Scholar]
- Baek Y. S., Jeon J., Ahn J. W., Song H. J. (2016). Antimicrobial resistance of Staphylococcus aureus isolated from skin infections and its implications in various clinical conditions in Korea. Int. J. Dermatol. 55, e191–e197. doi: 10.1111/ijd.13046, PMID: [DOI] [PubMed] [Google Scholar]
- Bai B., Lin Z., Pu Z., Xu G., Zhang F., Chen Z., et al. (2019). In vitro activity and Heteroresistance of Omadacycline against clinical Staphylococcus aureus isolates from China reveal the impact of Omadacycline susceptibility by branched-chain amino acid transport system II carrier protein, Na/pi cotransporter family protein, and fibronectin-binding protein. Front. Microbiol. 10:2546. doi: 10.3389/fmicb.2019.02546 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Banawas S. S., Alobaidi A. S., Dawoud T. M., AlDehaimi A., Alsubaie F. M., Abdel-Hadi A., et al. (2023). Prevalence of multidrug-resistant Bacteria in healthcare-associated bloodstream infections at hospitals in Riyadh, Saudi Arabia. Pathogens 12:1075. doi: 10.3390/pathogens12091075, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Barcudi D., Sosa E. J., Lamberghini R., Garnero A., Tosoroni D., Decca L., et al. (2020). MRSA dynamic circulation between the community and the hospital setting: new insights from a cohort study. J. Infect. 80, 24–37. doi: 10.1016/j.jinf.2019.10.001, PMID: [DOI] [PubMed] [Google Scholar]
- Baz A. A., Bakhiet E. K., Abdul-Raouf U., Abdelkhalek A. (2021). Prevalence of enterotoxin genes (SEA to SEE) and antibacterial resistant pattern of Staphylococcus aureus isolated from clinical specimens in Assiut city of Egypt. Egyptian J. Med. Hum. Genet. 22, 1–12. doi: 10.1186/s43042-021-00199-0 [DOI] [Google Scholar]
- Begg C. B., Mazumdar M. (1994). Operating characteristics of a rank correlation test for publication bias. Biometrics 50, 1088–1101. doi: 10.2307/2533446, PMID: [DOI] [PubMed] [Google Scholar]
- Belbase A., Pant N. D., Nepal K., Neupane B., Baidhya R., Baidya R., et al. (2017). Antibiotic resistance and biofilm production among the strains of Staphylococcus aureus isolated from pus/wound swab samples in a tertiary care hospital in Nepal. Ann. Clin. Microbiol. Antimicrob. 16:15. doi: 10.1186/s12941-017-0194-0, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Belete M. A. (2020). Bacterial profile and ESBL screening of urinary tract infection among asymptomatic and symptomatic pregnant women attending antenatal Care of Northeastern Ethiopia Region. Infect Drug Resist. 13, 2579–2592. doi: 10.2147/IDR.S258379, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bensaci M., Sahm D. (2017). Surveillance of tedizolid activity and resistance: in vitro susceptibility of gram-positive pathogens collected over 5 years from the United States and Europe. Diagn. Microbiol. Infect. Dis. 87, 133–138. doi: 10.1016/j.diagmicrobio.2016.10.009, PMID: [DOI] [PubMed] [Google Scholar]
- Bhatt P., Tandel K., Singh A., Mugunthan M., Grover N., Sahni A. K. (2016). Species distribution and antimicrobial resistance pattern of coagulase-negative staphylococci at a tertiary care Centre. Med. J. Armed Forces India 72, 71–74. doi: 10.1016/j.mjafi.2014.12.007, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bhattacharya S., Pal K., Jain S., Chatterjee S. S., Konar J. (2016). Surgical site infection by methicillin resistant Staphylococcus aureus- on decline? J. Clin. Diagn. Res. 10, DC32–DC36. doi: 10.7860/JCDR/2016/21664.8587, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bhavana A. M., Kumari P. H. P., Mohan N., Chandrasekhar V., Vijayalakshmi P., Manasa R. V. (2019). Bacterial vaginosis and antibacterial susceptibility pattern of asymptomatic urinary tract infection in pregnant women at a tertiary care hospital, Visakhaptn, India. Iran J. Microbiol. 11, 488–495, PMID: [PMC free article] [PubMed] [Google Scholar]
- Biset S., Moges F., Endalamaw D., Eshetie S. (2020). Multi-drug resistant and extended-spectrum beta-lactamases producing bacterial uropathogens among pregnant women in Northwest Ethiopia. Ann. Clin. Microbiol. Antimicrob. 19:25. doi: 10.1186/s12941-020-00365-z, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bishr A. S., Abdelaziz S. M., Yahia I. S., Yassien M. A., Hassouna N. A., Aboshanab K. M. (2021). Association of Macrolide Resistance Genotypes and Synergistic Antibiotic Combinations for combating macrolide-resistant MRSA recovered from hospitalized patients. Biology (Basel) 10. doi: 10.3390/biology10070624, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bolatchiev A. (2020). Antibacterial activity of human defensins against Staphylococcus aureus and Escherichia coli. PeerJ 8:e10455. doi: 10.7717/peerj.10455, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Boncompain C. A., Suarez C. A., Squeff M., Belluzo V., Piccirilli G., Molteni A., et al. (2023). Phenotypic and molecular characterization of Staphylococcus aureus isolates conducted in nares of psoriatic patients attending a public hospital in Argentina. Rev. Argent. Microbiol. 55, 3–11. doi: 10.1016/j.ram.2022.02.008, PMID: [DOI] [PubMed] [Google Scholar]
- Cavalcante F. S., Alvarenga C., Saintive S., Dios E., Carvalho D., Netto K. (2020). Staphylococcus aureus nasal isolates may have the same genetic profile in atopic dermatitis paediatric patients and their close contacts. J. Med. Microbiol. 69, 850–853. doi: 10.1099/jmm.0.001197, PMID: [DOI] [PubMed] [Google Scholar]
- Cavanagh J. P., Wolden R., Heise P., Esaiassen E., Klingenberg C., Aarag Fredheim E. G. (2016). Antimicrobial susceptibility and body site distribution of community isolates of coagulase-negative staphylococci. APMIS 124, 973–978. doi: 10.1111/apm.12591, PMID: [DOI] [PubMed] [Google Scholar]
- Chaleshtori S. H., Kachoie M. A. (2016). Chemical composition and antimicrobial effects of calendula officinalis grown under chemical and biological conditions on the methicillin-resistant staphylococcus aureus isolated from hospital infections. Biosci. Biotechnol. Res. Asia 13, 1787–1796. doi: 10.13005/bbra/2331 [DOI] [Google Scholar]
- Changchien C. H., Chen S. W., Chen Y. Y., Chu C. (2016). Antibiotic susceptibility and genomic variations in Staphylococcus aureus associated with skin and soft tissue infection (SSTI) disease groups. BMC Infect. Dis. 16:276. doi: 10.1186/s12879-016-1630-z, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chauhan S., Surender, Rappai T. (2021). Mupirocin resistance in staphylococcus aureus isolated from nasal swabs of ICU and OT staff- a study from a tertiary care hospital. J Pure Appl Microbiol 15, 2059–2064. doi: 10.22207/JPAM.15.4.28 [DOI] [Google Scholar]
- Chelkeba L., Fanta K., Mulugeta T., Melaku T. (2022). Bacterial profile and antimicrobial resistance patterns of common bacteria among pregnant women with bacteriuria in Ethiopia: a systematic review and meta-analysis. Arch. Gynecol. Obstet. 306, 663–686. doi: 10.1007/s00404-021-06365-4, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chelkeba L., Melaku T. (2022). Epidemiology of staphylococci species and their antimicrobial-resistance among patients with wound infection in Ethiopia: a systematic review and meta-analysis. J. Glob. Antimicrobial Resist. 29, 483–498. doi: 10.1016/j.jgar.2021.10.025, PMID: [DOI] [PubMed] [Google Scholar]
- Chen P. Y., Chuang Y. C., Wang J. T., Sheng W. H., Chen Y. C., Chang S. C. (2021). Sequence type 8 as an emerging clone of methicillin-resistant Staphylococcus aureus causing bloodstream infections in Taiwan. Emerg Microbes Infect 10, 1908–1918. doi: 10.1080/22221751.2021.1981158, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chen Y. L., Kang E. Y., Yeh L. K., Ma D. H. K., Tan H. Y., Chen H. C., et al. (2021). Clinical features and molecular characteristics of methicillin-susceptible Staphylococcus aureus ocular infection in Taiwan. Antibiotics (Basel) 10. doi: 10.3390/antibiotics10121445, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chen P., Sun F., Feng W., Hong H., Li B., Song J. (2021). Pathogenic characteristics Ofstaphylococcus aureusisolates from arthroplasty infections. Int. J. Artif. Organs 44, 208–214. doi: 10.1177/0391398820948877, PMID: [DOI] [PubMed] [Google Scholar]
- Cheung G. Y. C., Bae J. S., Otto M. (2021). Pathogenicity and virulence of Staphylococcus aureus. Virulence 12, 547–569. doi: 10.1080/21505594.2021.1878688, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Choi E. Y., Han J. Y., Lee H., Lee S. C., Koh H. J., Kim S. S., et al. (2019). Impact of antibiotic resistance of pathogens and early vitrectomy on the prognosis of infectious endophthalmitis: a 10-year retrospective study. Graefes Arch. Clin. Exp. Ophthalmol. 257, 805–813. doi: 10.1007/s00417-019-04261-x, PMID: [DOI] [PubMed] [Google Scholar]
- Cochran W. G. (1954). The combination of estimates from different experiments. Biometrics 10, 101–129. doi: 10.2307/3001666 [DOI] [Google Scholar]
- Conceicao T., de Lencastre H., Aires-de-Sousa M. (2021). Prevalence of biocide resistance genes and chlorhexidine and mupirocin non-susceptibility in Portuguese hospitals during a 31-year period (1985-2016). J. Glob. Antimicrob. Resist. 24, 169–174. doi: 10.1016/j.jgar.2020.12.010, PMID: [DOI] [PubMed] [Google Scholar]
- Coombs G. W., Daley D. A., Mowlaboccus S., Lee Y. T., Pang S., R. Australian Group on Antimicrobial (2020). Australian group on antimicrobial resistance (AGAR) Australian Staphylococcus aureus Sepsis outcome Programme (ASSOP) annual report 2018. Commun. Dis. Intell. 44:44. doi: 10.33321/cdi.2020.44.18, PMID: [DOI] [PubMed] [Google Scholar]
- Dayie N., Osei M. M., Opintan J. A., Tetteh-Quarcoo P. B., Kotey F. C. N., Ahenkorah J., et al. (2021). Nasopharyngeal carriage and antimicrobial susceptibility profile of Staphylococcus aureus among children under five years in Accra. Pathogens 10. doi: 10.3390/pathogens10020136, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- de Benito S., Alou L., Becerro-de-Bengoa-Vallejo R., Losa-Iglesias M. E., Gomez-Lus M. L., Collado L., et al. (2018). "prevalence of Staphylococcus spp. nasal colonization among doctors of podiatric medicine and associated risk factors in Spain." Antimicrob resist. Infect. Control. 7:24. doi: 10.1186/s13756-018-0318-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Demir C., Demirci M., Yigin A., Tokman H. B., Cetik Yildiz S. (2020). Presence of biofilm and adhesin genes in Staphylococcus aureus strains taken from chronic wound infections and their genotypic and phenotypic antimicrobial sensitivity patterns. Photodiagn. Photodyn. Ther. 29:101584. doi: 10.1016/j.pdpdt.2019.101584, PMID: [DOI] [PubMed] [Google Scholar]
- Deyno S., Fekadu S., Seyfe S. (2018). Prevalence and antimicrobial resistance of coagulase negative staphylococci clinical isolates from Ethiopia: a meta-analysis. BMC Microbiol. 18:43. doi: 10.1186/s12866-018-1188-6, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dilnessa T., Bitew A. (2016). Prevalence and antimicrobial susceptibility pattern of methicillin resistant Staphylococcus aureus isolated from clinical samples at Yekatit 12 hospital medical college, Addis Ababa, Ethiopia. BMC Infect. Dis. 16:398. doi: 10.1186/s12879-016-1742-5, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Diriba K., Kassa T., Alemu Y., Bekele S. (2020). In vitro biofilm formation and antibiotic susceptibility patterns of Bacteria from suspected external eye infected patients attending ophthalmology clinic, Southwest Ethiopia. Int J Microbiol 2020:8472395. doi: 10.1155/2020/8472395 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dormanesh B., Siroosbakhat S., Khodaverdi Darian E., Afsharkhas L. (2015). Methicillin-resistant Staphylococcus aureus isolated from various types of hospital infections in pediatrics: Panton-valentine Leukocidin, staphylococcal chromosomal cassette mec SCCmec phenotypes and antibiotic resistance properties. Jundishapur J. Microbiol. 8:e11341. doi: 10.5812/jjm.11341, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Doss R. W., Mostafa A. M. A., Arafa A. E. E.-D., Radi N. A. E.-M. (2017). Relationship between lipase enzyme and antimicrobial susceptibility of Staphylococcus aureus-positive and Staphylococcus epidermidis-positive isolates from acne vulgaris. J. Egypt. Women Dermatol. Soc. 14, 167–172. doi: 10.1097/01.EWX.0000516051.01553.99 [DOI] [Google Scholar]
- Duncan L. R., Sader H. S., Flamm R. K., Jones R. N., Mendes R. E. (2016). Oritavancin in vitro activity against contemporary Staphylococcus aureus isolates responsible for invasive community- and healthcare-associated infections among patients in the United States (2013-2014). Diagn. Microbiol. Infect. Dis. 86, 303–306. doi: 10.1016/j.diagmicrobio.2016.07.025, PMID: [DOI] [PubMed] [Google Scholar]
- Eibach D., Nagel M., Hogan B., Azuure C., Krumkamp R., Dekker D., et al. (2017). Nasal carriage of Staphylococcus aureus among children in the Ashanti region of Ghana. PLoS One 12:e0170320. doi: 10.1371/journal.pone.0170320, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- El Mammery A., Ramirez de Arellano E., Canada-Garcia J. E., Cercenado E., Villar-Gomara L., Casquero-Garcia V., et al. (2023). An increase in erythromycin resistance in methicillin-susceptible Staphylococcus aureus from blood correlates with the use of macrolide/lincosamide/streptogramin antibiotics. EARS-net Spain (2004-2020). Front. Microbiol. 14:1220286. doi: 10.3389/fmicb.2023.1220286, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- El-Amir M. I., El-Feky M. A., Abo Elwafa D. A., Abd-Elmawgood E. A. (2019). Rapid diagnosis of neonatal sepsis by PCR for detection of 16S rRNA gene, while blood culture and PCR results were similar in E.Coli-predominant EOS cases. Infect Drug Resist 12, 2703–2710. doi: 10.2147/IDR.S213958, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- El-Baghdady K. Z., El-Borhamy M. I., Abd El-Ghafar H. A. (2020). Prevalence of resistance and toxin genes in community-acquired and hospital-acquired methicillin-resistant Staphylococcus aureus clinical isolates. Iran. J. Basic Med. Sci. 23, 1251–1260. doi: 10.22038/ijbms.2020.40260.9534, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- El-Kersh T. A., Marie M. A., Al-Sheikh Y. A., Al-Agamy M. H., Al Bloushy A. A. (2016). Prevalence and risk factors of early fecal carriage of enterococcus faecalis and Staphylococcus spp and their antimicrobial resistant patterns among healthy neonates born in a hospital setting in Central Saudi Arabia. Saudi Med. J. 37, 280–287. doi: 10.15537/smj.2016.3.13871, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Elzorkany K. M. A., Elbrolosy A. M., Salem E. H. (2019). Methicillin-resistant Staphylococcus aureus carriage in hemodialysis vicinity: prevalence and decolonization approach. Indian J Nephrol 29, 282–287. doi: 10.4103/ijn.IJN_56_18, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eshetie S., Tarekegn F., Moges F., Amsalu A., Birhan W., Huruy K. (2016). Methicillin resistant Staphylococcus aureus in Ethiopia: a meta-analysis. BMC Infect. Dis. 16:689. doi: 10.1186/s12879-016-2014-0, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Esmaeili Benvidi M., Houri H., Ghalavand Z., Nikmanesh B., Azimi H., Samadi R., et al. (2017). Toxin production and drug resistance profiles of pediatric methicillin-resistant Staphylococcus aureus isolates in Tehran. J. Infect. Dev. Ctries. 11, 759–765. doi: 10.3855/jidc.9360, PMID: [DOI] [PubMed] [Google Scholar]
- Estany-Gestal A., Salgado-Barreira A., Vazquez-Lago J. M. (2024). Antibiotic use and antimicrobial resistance: a global public health crisis. Antibiotics (Basel) 13. doi: 10.3390/antibiotics13090900, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ezeh C. K., Eze C. N., Dibua M. E. U., Emencheta S. C. (2023). A meta-analysis on the prevalence of resistance of Staphylococcus aureus to different antibiotics in Nigeria. Antimicrob. Resist. Infect. Control 12:40. doi: 10.1186/s13756-023-01243-x, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Farah S. M., Alshehri M. A., Alfawaz T. S., Alasmeri F. A., Alageel A. A., Alshahrani D. A. (2019). Trends in antimicrobial susceptibility patterns in king Fahad Medical City, Riyadh, Saudi Arabia. Saudi Med. J. 40, 252–259. doi: 10.15537/smj.2019.3.23947, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fasihi Y., Saffari F., Kandehkar Ghahraman M. R., Kalantar-Neyestanaki D. (2016). Molecular detection of macrolide and Lincosamide-resistance genes in clinical methicillin-resistant Staphylococcus aureus isolates from Kerman, Iran. Archiv. Pediatr. Infect. Dis. 5:e37761. doi: 10.5812/pedinfect.37761 [DOI] [Google Scholar]
- Fateh Amirkhiz M., Ahangarzadeh Rezaee M., Hasani A., Aghazadeh M., Naghili B. (2015). SCCmec typing of methicillin-resistant Staphylococcus aureus: An eight year experience. Archiv. Pediatr. Infect. Dis. 3:e30632. doi: 10.5812/pedinfect.30632 [DOI] [Google Scholar]
- Fateh Dizji P., Khosravy M., Saeedi A. A., Asli M., Sepahvand S., Darvishi M. (2023). Prevalence of clindamycin-resistant Staphylococcus aureus induced by macrolide resistance, Iran, 2019-2021. Iran. J. Med. Microbiol. 17, 256–261. doi: 10.30699/ijmm.17.2.256 [DOI] [Google Scholar]
- Firoozeh F., Omidi M., Saffari M., Sedaghat H., Zibaei M. (2020). Molecular analysis of methicillin-resistant Staphylococcus aureus isolates from four teaching hospitals in Iran: the emergence of novel MRSA clones. Antimicrob. Resist. Infect. Control 9:112. doi: 10.1186/s13756-020-00777-8, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fu Y., Xiong M., Li X., Zhou J., Xiao X., Fang F., et al. (2020). Molecular characteristics, antimicrobial resistance and virulence gene profiles of Staphylococcus aureus isolates from Wuhan, Central China. Infect Drug Resist 13, 2063–2072. doi: 10.2147/IDR.S249988, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gajdacs M., Abrok M., Lazar A., Burian K. (2021). Urinary tract infections in elderly patients: a 10-year study on their epidemiology and antibiotic resistance based on the WHO access, watch, reserve (AWaRe) classification. Antibiotics (Basel) 10:1098. doi: 10.3390/antibiotics10091098 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Garza-Gonzalez E., Morfin-Otero R., Mendoza-Olazaran S., Bocanegra-Ibarias P., Flores-Trevino S., Rodriguez-Noriega E., et al. (2019). A snapshot of antimicrobial resistance in Mexico. Results from 47 centers from 20 states during a six-month period. PLoS One 14:e0209865. doi: 10.1371/journal.pone.0209865, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Getaneh A., Ayalew G., Belete D., Jemal M., Biset S. (2021). Bacterial etiologies of ear infection and their antimicrobial susceptibility pattern at the University of Gondar Comprehensive Specialized Hospital, Gondar, Northwest Ethiopia: a six-year retrospective study. Infect Drug Resist 14, 4313–4322. doi: 10.2147/IDR.S332348, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gitau W., Masika M., Musyoki M., Museve B., Mutwiri T. (2018). Antimicrobial susceptibility pattern of Staphylococcus aureus isolates from clinical specimens at Kenyatta National Hospital. BMC. Res. Notes 11:226. doi: 10.1186/s13104-018-3337-2, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Goes I., Romero L. C., Turra A. J., Gotardi M. A., Rodrigues T., Santos L. O., et al. (2021). Prevalence of nasal carriers of methicillin-resistant Staphylococcus aureus in primary health care units in Brazil. Rev. Inst. Med. Trop. Sao Paulo 63:e14. doi: 10.1590/s1678-9946202163014, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Goudarzi M., Abiri P., Nasirian S., Afshari S. G. (2018). SCCmec and spa typing of Staphylococcus aureus strains isolated from patients with urinary tract infection: emergence of spa types t426 and t021 in Iran. Jundishapur J. Microbiol. 11:e62169. doi: 10.5812/jjm.62169 [DOI] [Google Scholar]
- Goudarzi M., Tayebi Z., Fazeli M., Miri M., Nasiri M. J. (2020). Molecular characterization, drug resistance and virulence analysis of constitutive and inducible clindamycin resistance Staphylococcus aureus strains recovered from clinical samples, Tehran—Iran. Infect Drug Resist 13, 1155–1162. doi: 10.2147/IDR.S251450, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gungor S., Karagoz A., Kocak N., Arslantas T. (2021). Methicillin-resistant Staphylococcus aureus in a Turkish hospital: characterization of clonal types and antibiotic susceptibility. J. Infect. Dev. Ctries. 15, 1854–1860. doi: 10.3855/jidc.14963, PMID: [DOI] [PubMed] [Google Scholar]
- Guo Y., Ding Y., Liu L., Shen X., Hao Z., Duan J., et al. (2019). Antimicrobial susceptibility, virulence determinants profiles and molecular characteristics of Staphylococcus epidermidis isolates in Wenzhou, eastern China. BMC Microbiol. 19:157. doi: 10.1186/s12866-019-1523-6, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Guo Y., Song G., Sun M., Wang J., Wang Y. (2020). Prevalence and therapies of antibiotic-resistance in Staphylococcus aureus. Front. Cell. Infect. Microbiol. 10:107. doi: 10.3389/fcimb.2020.00107, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Guo Y., Wang B., Rao L., Wang X., Zhao H., Li M., et al. (2021). Molecular characteristics of rifampin-sensitive and -resistant isolates and characteristics of rpoB gene mutations in methicillin-resistant Staphylococcus aureus. Infect Drug Resist 14, 4591–4600. doi: 10.2147/IDR.S336200, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hailegiyorgis T. T., Sarhie W. D., Workie H. M. (2018). Isolation and antimicrobial drug susceptibility pattern of bacterial pathogens from pediatric patients with otitis media in selected health institutions, Addis Ababa, Ethiopia: a prospective cross-sectional study. BMC Ear Nose Throat Disord 18:8. doi: 10.1186/s12901-018-0056-1, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hasanvand H., Teymouri F., Ohadi E., Azadegan A., Sadeghi Kalani B. (2019). Biofilm formation in Staphylococcus epidermidis isolated from hospitalized patients. Archiv. Clin. Infect. Dis. 14:e64496. doi: 10.5812/archcid.64496 [DOI] [Google Scholar]
- Higgins J. P., Thompson S. G. (2002). Quantifying heterogeneity in a meta-analysis. Stat. Med. 21, 1539–1558. doi: 10.1002/sim.1186, PMID: [DOI] [PubMed] [Google Scholar]
- Hoffmann K., den Heijer C. D., George A., Apfalter P., Maier M. (2015). Prevalence and resistance patterns of commensal S. aureus in community-dwelling GP patients and socio-demographic associations. A cross-sectional study in the framework of the APRES-project in Austria. BMC Infect. Dis. 15:213. doi: 10.1186/s12879-015-0949-1, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Horvath A., Dobay O., Sahin-Toth J., Juhasz E., Pongracz J., Ivan M., et al. (2020). Characterisation of antibiotic resistance, virulence, clonality and mortality in MRSA and MSSA bloodstream infections at a tertiary-level hospital in Hungary: a 6-year retrospective study. Ann. Clin. Microbiol. Antimicrob. 19:17. doi: 10.1186/s12941-020-00357-z, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ibadin E. E., Enabulele I. O., Muinah F. (2017). Prevalence of mecA gene among staphylococci from clinical samples of a tertiary hospital in Benin City, Nigeria. Afr. Health Sci. 17, 1000–1010. doi: 10.4314/ahs.v17i4.7, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ikuta K., Swetschinski L., Robles G., Sharara F., Mestrovic T., Gray A., et al. (2022). Global mortality associated with 33 bacterial pathogens in 2019: a systematic analysis for the global burden of disease study 2019. Lancet 400, 2221–2248. doi: 10.1016/S0140-6736(22)02185-7, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Iliya S., Mwangi J., Maathai R., Muriuki M. (2020). Phenotypic analysis and antibiotic susceptibility of methicillin-resistant Staphylococcus aureus in Kiambu County, Kenya. J. Infect. Dev. Ctries. 14, 597–605. doi: 10.3855/jidc.12174, PMID: [DOI] [PubMed] [Google Scholar]
- Islam T. A. B., Shamsuzzaman S. (2015). Prevalence and antimicrobial susceptibility pattern of methicillin-resistant, vancomycin-resistant, and Panton-valentine leukocidin positive Staphylococcus aureus in a tertiary care hospital Dhaka, Bangladesh. Tzu Chi Med. J. 27, 10–14. doi: 10.1016/j.tcmj.2014.12.001 [DOI] [Google Scholar]
- Javidnia S., Talebi M., Katouli M., Shojaie A., Lari A. R., Pourshafie M. R. (2015). Clonal diversity of meticillin-resistant staphylococcus aureus isolated from intensive care unit. Infect. Dis. Clin. Pract. 23, 128–130. doi: 10.1097/IPC.0000000000000230 [DOI] [Google Scholar]
- Joachim A., Moyo S. J., Nkinda L., Majigo M., Mmbaga E., Mbembati N., et al. (2017). Prevalence of methicillin-resistant Staphylococcus aureus carriage on admission among patients attending regional hospitals in Dar Es Salaam, Tanzania. BMC. Res. Notes 10:417. doi: 10.1186/s13104-017-2668-8, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- John B., Mabekoje Oladele O., Aminat H., Saba M. A., Danasabe D., Legbo M. I., et al. (2023). Occurrence of Staphylococcus associated with urinary tract infections among women attending Ibrahim Badamasi Babangida (IBB) specialist hospital, Minna, Nigeria. Tanzan. J. Health Res. 24, 17–30. doi: 10.4314/thrb.v24i2 [DOI] [Google Scholar]
- Juda M., Chudzik-Rzad B., Malm A. (2016). The prevalence of genotypes that determine resistance to macrolides, lincosamides, and streptogramins B compared with spiramycin susceptibility among erythromycin-resistant Staphylococcus epidermidis. Mem. Inst. Oswaldo Cruz 111, 155–160. doi: 10.1590/0074-02760150356, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Junaidi N. S. S. A., Shakrin N. N. S. M., Huri M. F. D., Kamarudin A. Z., Desa M. N. M., Yunus W. M. Z. W. (2023). Antibiotic resistance and molecular typing of clinical Staphylococcus aureus isolates from Malaysian military hospital. Asian Pac J Trop Med 16, 220–231. doi: 10.4103/1995-7645.377743 [DOI] [Google Scholar]
- Kahsay A. G., Hagos D. G., Abay G. K., Mezgebo T. A. (2018). Prevalence and antimicrobial susceptibility patterns of methicillin-resistant Staphylococcus aureus among janitors of Mekelle university, North Ethiopia. BMC. Res. Notes 11:294. doi: 10.1186/s13104-018-3399-1, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kang S. H., Kim M. K. (2019). Antibiotic sensitivity and resistance of bacteria from odontogenic maxillofacial abscesses. J. Korean Assoc. Oral Maxillofac. Surg. 45, 324–331. doi: 10.5125/jkaoms.2019.45.6.324, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Khader K., Thomas A., Jones M., Toth D., Stevens V., Samore M. H., et al. (2019). Variation and trends in transmission dynamics of methicillin-resistant Staphylococcus aureus in veterans affairs hospitals and nursing homes. Epidemics 28:100347. doi: 10.1016/j.epidem.2019.100347, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Khan F. Y., Abu-Khattab M., Almaslamani E. A., Hassan A. A., Mohamed S. F., Elbuzdi A. A., et al. (2017). Acute bacterial meningitis in Qatar: a hospital-based study from 2009 to 2013. Biomed. Res. Int. 2017:2975610. doi: 10.1155/2017/2975610 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Khan S., Singh P., Siddiqui Z., Ansari M. (2015). Pregnancy-associated asymptomatic bacteriuria and drug resistance. J. Taibah Univ. Med. Sci. 10, 340–345. doi: 10.1016/j.jtumed.2015.01.011 [DOI] [Google Scholar]
- Khanal A., Sulochan G. C., Gaire A., Khanal A., Estrada R., Ghimire R., et al. (2021). Methicillin-resistant Staphylococcus aureus in Nepal: a systematic review and meta-analysis. Int. J. Infect. Dis. 103, 48–55. doi: 10.1016/j.ijid.2020.11.152, PMID: [DOI] [PubMed] [Google Scholar]
- Khemiri M., Akrout Alhusain A., Abbassi M. S., El Ghaieb H., Santos Costa S., Belas A., et al. (2017). Clonal spread of methicillin-resistant Staphylococcus aureus-t6065-CC5-SCCmecV-agrII in a Libyan hospital. J. Glob. Antimicrob. Resist. 10, 101–105. doi: 10.1016/j.jgar.2017.04.014, PMID: [DOI] [PubMed] [Google Scholar]
- Kim H. J., Choi Q., Kwon G. C., Koo S. H. (2020). Molecular epidemiology and virulence factors of methicillin-resistant Staphylococcus aureus isolated from patients with bacteremia. J. Clin. Lab. Anal. 34:e23077. doi: 10.1002/jcla.23077, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kong Y., Ye J., Zhou W., Jiang Y., Lin H., Zhang X., et al. (2018). Prevalence of methicillin-resistant Staphylococcus aureus colonisation among healthcare workers at a tertiary care hospital in southeastern China. J. Glob. Antimicrob. Resist. 15, 256–261. doi: 10.1016/j.jgar.2018.08.013 [DOI] [PubMed] [Google Scholar]
- Kpeli G., Darko Otchere I., Lamelas A., Buultjens A. L., Bulach D., Baines S. L., et al. (2016). Possible healthcare-associated transmission as a cause of secondary infection and population structure of Staphylococcus aureus isolates from two wound treatment centres in Ghana. New Microb. New Infect. 13, 92–101. doi: 10.1016/j.nmni.2016.07.001, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kuhn M., Wing J., Weston S., Williams A., Keefer C., Engelhardt A., et al. (2015). Caret: Classification and regression training. (Version 7.0-1) [Computer software]. Available at: https://github.com/topepo/caret/
- Kulshrestha N., Ghatak T., Gupta P., Singh M., Agarwal J., Mishra P. (2021). Surveillance of health-care workers hand to detect carriage of multidrug-resistant Staphylococcus spp. in a tertiary care center: An observational study. Med. J. Dr. D.Y. Patil Vidyapeeth 14, 403–408. doi: 10.4103/mjdrdypu.mjdrdypu_372_20 [DOI] [Google Scholar]
- Kumar S., Shetty V. A. (2021). Prevalence and susceptibility profiles of methicillin sensitive Staphylococcus aureus from community and hospital associated infections. J. Clin. Diagn. Res. 15:5. doi: 10.7860/JCDR/2021/48115.14622 [DOI] [Google Scholar]
- Kumar R. A., Thirugnanamani R., Dodeja S., Satish H. S. (2018). Bacterial profile and antibiotic sensitivity in patients with chronic rhinosinusitis undergoing functional endoscopic sinus surgery: a prospective study. Int. J. Clin. Rhinol. 10, 137–141. doi: 10.5005/jp-journals-10013-1325, PMID: 35702834 [DOI] [Google Scholar]
- Kurup R., Ansari A. A. (2019). A study to identify bacteriological profile and other risk factors among diabetic and non-diabetic foot ulcer patients in a Guyanese hospital setting. Diabetes Metab. Syndr. 13, 1871–1876. doi: 10.1016/j.dsx.2019.04.024, PMID: [DOI] [PubMed] [Google Scholar]
- Lan T., Zhang B., Liu J. L., Jia Q., Gao J., Cao L., et al. (2024). Prevalence and antibiotic resistance patterns of methicillin-resistant Staphylococcus aureus (MRSA) in a hospital setting: a retrospective study from 2018 to 2022. Indian J. Microbiol. 64, 1035–1043. doi: 10.1007/s12088-024-01228-3, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Larsen J., Petersen A., Sorum M., Stegger M., van Alphen L., Valentiner-Branth P., et al. (2015). Meticillin-resistant Staphylococcus aureus CC398 is an increasing cause of disease in people with no livestock contact in Denmark, 1999 to 2011. Euro Surveill. 20. doi: 10.2807/1560-7917.ES.2015.20.37.30021, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Leclercq R. (2002). Mechanisms of resistance to macrolides and lincosamides: nature of the resistance elements and their clinical implications. Clin. Infect. Dis. 34, 482–492. doi: 10.1086/324626, PMID: [DOI] [PubMed] [Google Scholar]
- Lee Y. C., Chen P. Y., Wang J. T., Chang S. C. (2020). Prevalence of fosfomycin resistance and gene mutations in clinical isolates of methicillin-resistant Staphylococcus aureus. Antimicrob. Resist. Infect. Control 9:135. doi: 10.1186/s13756-020-00790-x, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lee S. O., Lee S., Park S., Lee J. E., Lee S. H. (2019). The cefazolin inoculum effect and the presence of type a blaZ gene according to agr genotype in methicillin-susceptible Staphylococcus aureus bacteremia. Infect Chemother. 51, 376–385. doi: 10.3947/ic.2019.51.4.376, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Leibler J. H., Leon C., Cardoso L. J. P., Morris J. C., Miller N. S., Nguyen D. D., et al. (2017). Prevalence and risk factors for MRSA nasal colonization among persons experiencing homelessness in Boston, MA. J. Med. Microbiol. 66, 1183–1188. doi: 10.1099/jmm.0.000552, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lenart-Boron A., Wolny-Koladka K., Stec J., Kasprowic A. (2016). Phenotypic and molecular antibiotic resistance determination of airborne coagulase negative Staphylococcus spp. strains from healthcare facilities in southern Poland. Microb. Drug Resist. 22, 515–522. doi: 10.1089/mdr.2015.0271, PMID: [DOI] [PubMed] [Google Scholar]
- Lennartz F. E., Schwartbeck B., Dubbers A., Grosse-Onnebrink J., Kessler C., Kuster P., et al. (2019). The prevalence of Staphylococcus aureus with mucoid phenotype in the airways of patients with cystic fibrosis-a prospective study. Int. J. Med. Microbiol. 309, 283–287. doi: 10.1016/j.ijmm.2019.05.002, PMID: [DOI] [PubMed] [Google Scholar]
- Li S., Guo Y., Zhao C., Chen H., Hu B., Chu Y., et al. (2016). In vitro activities of tedizolid compared with other antibiotics against gram-positive pathogens associated with hospital-acquired pneumonia, skin and soft tissue infection and bloodstream infection collected from 26 hospitals in China. J. Med. Microbiol. 65, 1215–1224. doi: 10.1099/jmm.0.000347, PMID: [DOI] [PubMed] [Google Scholar]
- Li S., Han Z., He J., Gao S., Liu D., Liu L., et al. (2018). Society for Translational Medicine expert consensus on the use of antibacterial drugs in thoracic surgery. J. Thorac. Dis. 10, 6356–6374. doi: 10.21037/jtd.2018.10.108, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liang J., Hu Y., Fu M., Li N., Wang F., Yu X., et al. (2023). Resistance and molecular characteristics of methicillin-resistant Staphylococcus aureus and heterogeneous vancomycin-intermediate Staphylococcus aureus. Infect Drug Resist 16, 379–388. doi: 10.2147/IDR.S392908, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liang B., Mai J., Liu Y., Huang Y., Zhong H., Xie Y., et al. (2018). Prevalence and characterization of Staphylococcus aureus isolated from women and children in Guangzhou, China. Front. Microbiol. 9:2790. doi: 10.3389/fmicb.2018.02790, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lin J., Wu C., Yan C., Ou Q., Lin D., Zhou J., et al. (2018). A prospective cohort study of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus carriage in neonates: the role of maternal carriage and phenotypic and molecular characteristics. Infect Drug Resist 11, 555–565. doi: 10.2147/IDR.S157522, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liu C., Chen Z. J., Sun Z., Feng X., Zou M., Cao W., et al. (2015). Molecular characteristics and virulence factors in methicillin-susceptible, resistant, and heterogeneous vancomycin-intermediate Staphylococcus aureus from Central-Southern China. J. Microbiol. Immunol. Infect. 48, 490–496. doi: 10.1016/j.jmii.2014.03.003, PMID: [DOI] [PubMed] [Google Scholar]
- Livermore D. M., Mushtaq S., Warner M., James D., Kearns A., Woodford N. (2015). Pathogens of skin and skin-structure infections in the UK and their susceptibility to antibiotics, including ceftaroline. J. Antimicrob. Chemother. 70, 2844–2853. doi: 10.1093/jac/dkv179, PMID: [DOI] [PubMed] [Google Scholar]
- Lodise T. P., Jr., McKinnon P. S. (2007). Burden of methicillin-resistant Staphylococcus aureus: focus on clinical and economic outcomes. Pharmacotherapy 27, 1001–1012. doi: 10.1592/phco.27.7.1001, PMID: [DOI] [PubMed] [Google Scholar]
- Luo Z. G., Ying X. R., Shen C., Ren Y., Wang S. B., Wu G. F. (2020). Characteristics and drug resistance of pathogens in urinary tract infection patients complicated with urinary calculi. Indian J. Pharm. Sci. 82, 922–927. [Google Scholar]
- Mahfouz A. A., Said H. S., Elfeky S. M., Shaaban M. I. (2023). Inhibition of erythromycin and erythromycin-induced resistance among Staphylococcus aureus clinical isolates. Antibiotics (Basel) 12. doi: 10.3390/antibiotics12030503, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maina D., Omuse G., Revathi G., Adam R. D. (2016). Spectrum of microbial diseases and resistance patterns at a private teaching Hospital in Kenya: implications for clinical practice. PLoS One 11:e0147659. doi: 10.1371/journal.pone.0147659, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maleki D. T., Ghalavand Z., Laabei M., Nikmanesh B., Houri H., Kodori M., et al. (2019). Molecular analysis of accessory gene regulator functionality and virulence genes in Staphylococcus aureus derived from pediatric wound infections. Infect. Genet. Evol. 73, 255–260. doi: 10.1016/j.meegid.2019.05.013, PMID: [DOI] [PubMed] [Google Scholar]
- Mama M., Aklilu A., Misgna K., Tadesse M., Alemayehu E. (2019). Methicillin- and inducible clindamycin-resistant Staphylococcus aureus among patients with wound infection attending Arba Minch hospital, South Ethiopia. Int J Microbiol 2019:2965490. doi: 10.1155/2019/2965490 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Manandhar S., Shrestha R., Tuladhar R. S., Lekhak S. (2021). Inducible clindamycin resistance and biofilm production among staphylococci isolated from tertiary care hospitals in Nepal. Infect Dis. Rep. 13, 1043–1052. doi: 10.3390/idr13040095, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mansson E., Hellmark B., Sundqvist M., Soderquist B. (2015). Sequence types of Staphylococcus epidermidis associated with prosthetic joint infections are not present in the laminar airflow during prosthetic joint surgery. APMIS 123, 589–595. doi: 10.1111/apm.12392, PMID: [DOI] [PubMed] [Google Scholar]
- Mascaro V., Capano M. S., Iona T., Nobile C. G. A., Ammendolia A., Pavia M. (2019). Prevalence of Staphylococcus aureus carriage and pattern of antibiotic resistance, including methicillin resistance, among contact sport athletes in Italy. Infect Drug Resist. 12, 1161–1170. doi: 10.2147/IDR.S195749, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- McHardy I. H., Veltman J., Hindler J., Bruxvoort K., Carvalho M. M., Humphries R. M. (2017). Clinical and microbiological aspects of beta-lactam resistance in Staphylococcus lugdunensis. J. Clin. Microbiol. 55, 585–595. doi: 10.1128/JCM.02092-16, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mehreen A., Liaqat I., Arshad M., Waheed M., Arshad N. (2018). Characterization of Staphylococcus aureus from sore throat patients: association among host immune evasion and toxin genes. Pak. J. Zool. 50. doi: 10.17582/journal.pjz/2018.50.6.2261.2272 [DOI] [Google Scholar]
- Mesbah Elkammoshi A., Ghasemzadeh-Moghaddam H., Amin Nordin S., Mohd Taib N., Kumar Subbiah S., Neela V., et al. (2016). A low prevalence of inducible macrolide, Lincosamide, and Streptogramin B resistance phenotype among methicillin-susceptible Staphylococcus aureus isolated from Malaysian patients and healthy individuals. Jundishapur J. Microbiol. 9:e37148, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Miklasinska-Majdanik M. (2021). Mechanisms of resistance to macrolide antibiotics among Staphylococcus aureus. Antibiotics (Basel) 10. doi: 10.3390/antibiotics10111406, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Modukuru G. K., Surya P. M. S., Kakumanu V. R., Yarava S. (2021). Phenotypic characterization of macrolide-Lincosamide-Streptogramin B resistance in Staphylococcus aureus. J. Pure Appl. Microbiol. 15, 689–694. doi: 10.22207/JPAM.15.2.18 [DOI] [Google Scholar]
- Mostafa M., Siadat S. D., Shahcheraghi F., Vaziri F., Japoni-Nejad A., Vand Yousefi J., et al. (2015). Variability in gene cassette patterns of class 1 and 2 integrons associated with multi drug resistance patterns in Staphylococcus aureus clinical isolates in Tehran-Iran. BMC Microbiol. 15:152. doi: 10.1186/s12866-015-0488-3, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mottola C., Matias C. S., Mendes J. J., Melo-Cristino J., Tavares L., Cavaco-Silva P., et al. (2016). Susceptibility patterns of Staphylococcus aureus biofilms in diabetic foot infections. BMC Microbiol. 16:119. doi: 10.1186/s12866-016-0737-0, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Muhammad A., Khan S. N., Ali N., Rehman M. U., Ali I. (2020). Prevalence and antibiotic susceptibility pattern of uropathogens in outpatients at a tertiary care hospital. New Microbes New Infect 36:100716. doi: 10.1016/j.nmni.2020.100716, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Murugesan S., Perumal N., Mahalingam S. P., Dilliappan S. K., Krishnan P. (2015). Analysis of antibiotic resistance genes and its associated SCCmec types among nasal carriage of methicillin resistant coagulase negative staphylococci from community settings, Chennai, southern India. J. Clin. Diagn. Res. 9:DC01-05. doi: 10.7860/JCDR/2015/11733.6307, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mutonga D. M., Mureithi M. W., Ngugi N. N., Otieno F. C. F. (2019). Bacterial isolation and antibiotic susceptibility from diabetic foot ulcers in Kenya using microbiological tests and comparison with RT-PCR in detection of S. Aureus and MRSA. BMC. Res. Notes 12:244. doi: 10.1186/s13104-019-4278-0, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Naghavi M., Vollset S., Ikuta K., Swetschinski L., Gray A., Wool E., et al. (2024). Global burden of bacterial antimicrobial resistance 1990-2021: a systematic analysis with forecasts to 2050. Lancet 404, 1199–1226. doi: 10.1016/S0140-6736(24)01867-1, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Napp M., Daeschlein G., von Podewils S., Hinz P., Emmert S., Haase H., et al. (2016). In vitro susceptibility of methicillin-resistant and methicillin-susceptible strains of Staphylococcus aureus to two different cold at plasma sources. Infection 44, 531–537. doi: 10.1007/s15010-016-0888-9, PMID: [DOI] [PubMed] [Google Scholar]
- Nasirian S., Saadatmand S., Goudarzi H., Goudarzi M., Azimi H. (2018). Molecular investigation of methicillin-resistant Staphylococcus aureus strains recovered from the intensive care unit (ICU) based on toxin, adhesion genes and agr locus type analysis. Arch. Clin. Infect. Dis. 13:e14495. [Google Scholar]
- Nichol K. A., Adam H. J., Golding G. R., Lagace-Wiens P. R. S., Karlowsky J. A., Hoban D. J., et al. (2019). Characterization of MRSA in Canada from 2007 to 2016. J. Antimicrob. Chemother. 74, iv55–iv63. doi: 10.1093/jac/dkz288, PMID: [DOI] [PubMed] [Google Scholar]
- Noordin A., Sapri H. F., Mohamad Sani N. A., Leong S. K., Tan X. E., Tan T. L., et al. (2016). Antimicrobial resistance profiling and molecular typing of methicillin-resistant Staphylococcus aureus isolated from a Malaysian teaching hospital. J. Med. Microbiol. 65, 1476–1481. doi: 10.1099/jmm.0.000387, PMID: [DOI] [PubMed] [Google Scholar]
- Numanovic F., Dermota U., Smajlovic J., Janezic S., Tihic N., Delibegovic Z., et al. (2021). Characterization and clonal representation of MRSA strains in Tuzla Canton, Bosnia and Herzegovina, from 2009 to 2017. Med. Glas. (Zenica) 18, 38–46. doi: 10.17392/1265-21, PMID: [DOI] [PubMed] [Google Scholar]
- Okuda K. V., Toepfner N., Alabi A. S., Arnold B., Belard S., Falke U., et al. (2016). Molecular epidemiology of Staphylococcus aureus from Lambarene, Gabon. Eur. J. Clin. Microbiol. Infect. Dis. 35, 1963–1973. doi: 10.1007/s10096-016-2748-z, PMID: [DOI] [PubMed] [Google Scholar]
- Olufunmiso O., Tolulope I., Roger C. (2017). Multidrug and vancomycin resistance among clinical isolates of Staphylococcus aureus from different teaching hospitals in Nigeria. Afr. Health Sci. 17, 797–807. doi: 10.4314/ahs.v17i3.23, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ouidri M. A. (2018). Screening of nasal carriage of methicillin-resistant Staphylococcus aureus during admission of patients to Frantz fanon hospital, Blida, Algeria. New Microbes New Infect 23, 52–60. doi: 10.1016/j.nmni.2018.02.006, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Oydanich M., Dingle T. C., Hamula C. L., Ghisa C., Asbell P. (2017). Retrospective report of antimicrobial susceptibility observed in bacterial pathogens isolated from ocular samples at Mount Sinai hospital, 2010 to 2015. Antimicrob. Resist. Infect. Control 6:29. doi: 10.1186/s13756-017-0185-0, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Parastan R., Kargar M., Solhjoo K., Kafilzadeh F. (2020). A synergistic association between adhesion-related genes and multidrug resistance patterns of Staphylococcus aureus isolates from different patients and healthy individuals. J. Glob. Antimicrob. Resist. 22, 379–385. doi: 10.1016/j.jgar.2020.02.025, PMID: [DOI] [PubMed] [Google Scholar]
- Peng X., Zhu Q., Liu J., Zeng M., Qiu Y., Zhu C., et al. (2021). Prevalence and antimicrobial resistance patterns of bacteria isolated from cerebrospinal fluid among children with bacterial meningitis in China from 2016 to 2018: a multicenter retrospective study. Antimicrob. Resist. Infect. Control 10:24. doi: 10.1186/s13756-021-00895-x [DOI] [PMC free article] [PubMed] [Google Scholar]
- Peterside O., Pondei K., Akinbami F. O. (2015). Bacteriological profile and antibiotic susceptibility pattern of neonatal Sepsis at a teaching Hospital in Bayelsa State, Nigeria. Trop. Med. Health 43, 183–190. doi: 10.2149/tmh.2015-03, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Petrović J. L., Kuljić K. N., Ristanović E., Jošić D., Lepšanović Z. (2016). Prevalence of Panton-valentine leukocidin genes in community-associated methicillin-resistant Staphylococcus aureus in the district of Pomoravlje. Vojnosanit. Pregl. 73, 256–260. doi: 10.2298/VSP140715003P, PMID: [DOI] [PubMed] [Google Scholar]
- Pfaller M. A., Huband M. D., Shortridge D., Flamm R. K. (2020). Surveillance of Omadacycline activity tested against clinical isolates from the United States and Europe: report from the SENTRY antimicrobial surveillance program, 2016 to 2018. Antimicrob. Agents Chemother. 64:e02488–19. doi: 10.1128/AAC.02488-19, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pradhan P., Rajbhandari P., Nagaraja S. B., Shrestha P., Grigoryan R., Satyanarayana S., et al. (2021). Prevalence of methicillin-resistant Staphylococcus aureus in a tertiary hospital in Nepal. Public Health Action 11, 46–51. doi: 10.5588/pha.21.0042, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Preeja P. P., Kumar S. H., Shetty V. (2021). Prevalence and characterization of methicillin-resistant Staphylococcus aureus from community- and hospital-associated infections: a tertiary care center study. Antibiotics (Basel) 10:197. doi: 10.3390/antibiotics10020197, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pushkar Aashana, Sharma M., Yadav A. (2022). "Prevalence and antimicrobial resistance of methicillin resistant Staphylococcus aureus (MRSA) isolated from blood culture in tertiary care hospital in Haryana." Pravara. Med. Rev. 14, 64–68. doi: 10.36848/PMR/2022/99100.51095 [DOI] [Google Scholar]
- Qin Y., Wen F., Zheng Y., Zhao R., Hu Q., Zhang R. (2017). Antimicrobial resistance and molecular characteristics of methicillin-resistant Staphylococcus aureus isolates from child patients of high-risk wards in Shenzhen, China. Jpn. J. Infect. Dis. 70, 479–484. doi: 10.7883/yoken.JJID.2016.328, PMID: [DOI] [PubMed] [Google Scholar]
- Rahimi F. (2016). Characterization of resistance to aminoglycosides in methicillin-resistant Staphylococcus aureus strains isolated from a tertiary Care Hospital in Tehran, Iran. Jundishapur J. Microbiol. 9:e29237. doi: 10.5812/jjm.29237, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rajkumar S., Sistla S., Manoharan M., Sugumar M., Nagasundaram N., Parija S. C., et al. (2017). Prevalence and genetic mechanisms of antimicrobial resistance in Staphylococcus species: a multicentre report of the indian council of medical research antimicrobial resistance surveillance network. Indian J. Med. Microbiol. 35, 53–60. doi: 10.4103/ijmm.IJMM_16_427, PMID: [DOI] [PubMed] [Google Scholar]
- Ramakrishna M. S., Jeyamani L., Abimannan G. C., Vajravelu L. K. (2021). Microbial profile and Antibiogram pattern analysis of skin and soft tissue infections at a tertiary Care Center in South India. J. Pure Appl. Microbiol. 15, 915–925. doi: 10.22207/JPAM.15.2.50 [DOI] [Google Scholar]
- Rampelotto R. F., Coelho S. S., Franco L. N., Mota A. D. D., Calegari L. F., Jacobi L. F., et al. (2022). Coagulase-negative staphylococci isolates from blood cultures of newborns in a tertiary hospital in southern Brazil. Braz. J. Pharm. Sci. 58:e19664. doi: 10.1590/s2175-97902022e19664 [DOI] [Google Scholar]
- Raut S., Bajracharya K., Adhikari J., Pant S. S., Adhikari B. (2017). Prevalence of methicillin resistant Staphylococcus aureus in Lumbini medical college and teaching hospital, Palpa, Western Nepal. BMC. Res. Notes 10:187. doi: 10.1186/s13104-017-2515-y, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Roden L., Gorlich D., Omran H., Peters G., Grosse-Onnebrink J., Kahl B. C. (2019). A retrospective analysis of the pathogens in the airways of patients with primary ciliary dyskinesia. Respir. Med. 156, 69–77. doi: 10.1016/j.rmed.2019.08.009, PMID: [DOI] [PubMed] [Google Scholar]
- Rukan M., Jamil H., Bokhari H. A., Khattak A. A., Khan A. N., Ullah Z., et al. (2021). Nasal carriage of highly resistant methicillin resistant Staphylococcus aureus (MRSA) strains by hospital staff in Hazara region of Pakistan. J. Pak. Med. Assoc. 71, 47–50. doi: 10.47391/JPMA.177, PMID: [DOI] [PubMed] [Google Scholar]
- Saini V., Jain C., Singh N. P., Alsulimani A., Gupta C., Dar S. A., et al. (2021). Paradigm shift in antimicrobial resistance pattern of bacterial isolates during the COVID-19 pandemic. Antibiotics (Basel) 10:954. doi: 10.3390/antibiotics10080954, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sakabe D., Del Fiol Fde S. (2016). Profile of infections and antimicrobial treatment among burn-injury patients. Am. J. Infect. Control 44, 950–952. doi: 10.1016/j.ajic.2016.03.063, PMID: [DOI] [PubMed] [Google Scholar]
- Salah A., Al-Subol I., Hudna A., Alhaj A., Alqubaty A. R., Farie W., et al. (2021). Neonatal sepsis in Sana'a city, Yemen: a predominance of Burkholderia cepacia. BMC Infect. Dis. 21:1108. doi: 10.1186/s12879-021-06808-y, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Salarvand S., Abdollahi A., Doraghi M., Miratashi Yazdi S. A., Panahi Z., Mortazavi S. M. J., et al. (2023). Microbiological profile and drug resistance in bone and joint infections: a survey in orthopedic wards of a great referral Hospital in Tehran, Iran. Jundishapur J. Microbiol. 16:e137125. doi: 10.5812/jjm-137125 [DOI] [Google Scholar]
- Saleem M., Ahmad I., Salem A. M., Almarshedy S. M., Moursi S. A., Syed Khaja A. S., et al. (2025). Molecular and genetic analysis of methicillin-resistant Staphylococcus aureus (MRSA) in a tertiary care hospital in Saudi Arabia. Naunyn. Schmiedebergs Arch. Pharmacol. doi: 10.1007/s00210-024-03771-8, PMID: [DOI] [PubMed] [Google Scholar]
- Sanchez A., Benito N., Rivera A., Garcia L., Miro E., Mur I., et al. (2020). Pathogenesis of Staphylococcus epidermidis in prosthetic joint infections: can identification of virulence genes differentiate between infecting and commensal strains? J. Hosp. Infect. 105, 561–568. doi: 10.1016/j.jhin.2020.04.026, PMID: [DOI] [PubMed] [Google Scholar]
- Sapkota J., Sharma M., Jha B., Bhatt C. P. (2019). Prevalence of Staphylococcus aureus isolated from clinical samples in a tertiary care hospital: a descriptive cross-sectional study. JNMA J. Nepal Med. Assoc. 57, 398–402. doi: 10.31729/jnma.4673, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Saxena S., Priyadarshi M., Saxena A., Singh R. (2019). Antimicrobial consumption and bacterial resistance pattern in patients admitted in I.C.U at a tertiary care center. J. Infect. Public Health 12, 695–699. doi: 10.1016/j.jiph.2019.03.014, PMID: [DOI] [PubMed] [Google Scholar]
- Selim S., Faried O. A., Almuhayawi M. S., Saleh F. M., Sharaf M., El Nahhas N., et al. (2022). Incidence of vancomycin-resistant Staphylococcus aureus strains among patients with urinary tract infections. Antibiotics (Basel) 11:408. doi: 10.3390/antibiotics11030408, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shashindran N., Nagasundaram N., Thappa D. M., Sistla S. (2016). Can Panton valentine Leukocidin gene and clindamycin susceptibility serve as predictors of community origin of MRSA from skin and soft tissue infections? J. Clin. Diagn. Res. 10, DC01–DC04. doi: 10.7860/JCDR/2016/14531.7036, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sheeba V., Vedachalam D., Affan T. F. (2021). An increasing trend in the antimicrobial resistance of bacterial isolates from skin and soft tissue infections in a tertiary care hospital. J. Pure Appl. Microbiol. 15, 803–812. doi: 10.22207/JPAM.15.2.34 [DOI] [Google Scholar]
- Shidiki A., Pandit B., Vyas A. (2018). Incidence and antibiotic profile of bacterial isolates from neonatal septicemia in national medical college and teaching hospital, Birgunj, Nepal. Res. J. Pharm. Technol. 11, 2238–2242. doi: 10.5958/0974-360X.2018.00414.6 [DOI] [Google Scholar]
- Shittu A. O., Oyedara O., Okon K., Raji A., Peters G., von Muller L., et al. (2015). An assessment on DNA microarray and sequence-based methods for the characterization of methicillin-susceptible Staphylococcus aureus from Nigeria. Front. Microbiol. 6:1160. doi: 10.3389/fmicb.2015.01160 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shivappa S. G., Morubagal R. R., Mahale R. P., Gowda R. S. (2018). Prevalence and Antibiogram of methicillin sensitive and methicillin resistant Staphylococcus aureus isolated from pus samples in a tertiary care teaching hospital. J. Pure Appl. Microbiol. 12, 2297–2303. doi: 10.22207/JPAM.12.4.71 [DOI] [Google Scholar]
- Singh N., Hota S., S. snigdha Panda, D. Pattnaik, A. Praharaj and J. Jena (2019). "Prevalence and antibiotic resistance profile of coagulase negative staphylococci causing true Bacteraemia in a tertiary care hospital." Indian J. Public Health 10:479. doi: 10.5958/0976-5506.2019.02474.4 [DOI] [Google Scholar]
- Skender K., Machowska A., Singh V., Goel V., Marothi Y., Lundborg C. S., et al. (2022). Antibiotic use, incidence and risk factors for orthopedic surgical site infections in a teaching Hospital in Madhya Pradesh, India. Antibiotics (Basel) 11:748. doi: 10.3390/antibiotics11060748, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Solomon J. G., Salaudeen A. G. (2021). Antibiotics resistance, sensitivity pattern and development of antibiogram to support empirical prescription in health facilities in south senatorial district of Kwara state, Nigeria 9, 35–45. doi: 10.21522/TIJPH.2013.09.03.Art004 [DOI] [Google Scholar]
- Soroush S., Jabalameli F., Taherikalani M., Amirmozafari N., Fooladi A. A., Asadollahi K., et al. (2016). Investigation of biofilm formation ability, antimicrobial resistance and the staphylococcal cassette chromosome mec patterns of methicillin resistant Staphylococcus epidermidis with different sequence types isolated from children. Microb. Pathog. 93, 126–130. doi: 10.1016/j.micpath.2016.01.018, PMID: [DOI] [PubMed] [Google Scholar]
- Sotoudeh Anvari M., Kianinejad R., Boroumand M. A., Arzhan S., Jalali A. (2015). Bacterial pericarditis and antimicrobial resistance at the Tehran Heart Center, Iran. J. Infect. Dev. Ctries. 9, 780–784. doi: 10.3855/jidc.6027, PMID: [DOI] [PubMed] [Google Scholar]
- Soumya K. R., Philip S., Sugathan S., Mathew J., Radhakrishnan E. K. (2017). Virulence factors associated with Coagulase Negative Staphylococci isolated from human infections. 3 Biotech 7:140. doi: 10.1007/s13205-017-0753-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sterne J. A. C., Egger M. (2005). Regression methods to detect publication and other Bias in Meta-analysis. Public. Bias Meta Analysis, 99–110. doi: 10.1002/0470870168.ch6 [DOI] [Google Scholar]
- Sultan A., Rizvi M., Khan F., Sami H., Shukla I., Khan H. M. (2015). Increasing antimicrobial resistance among uropathogens: is fosfomycin the answer? Urol. Ann. 7, 26–30. doi: 10.4103/0974-7796.148585, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Suneel Kumar A., Smiline Girija A. S., Naga Srilatha B. (2021). Characterization of biofilm producing methicillin resistant coagulase negative staphylococci from India. Acta Microbiol. Immunol. Hung. 69, 35–40. doi: 10.1556/030.2021.01538 [DOI] [PubMed] [Google Scholar]
- Sutter D. E., Milburn E., Chukwuma U., Dzialowy N., Maranich A. M., Hospenthal D. R. (2016). Changing susceptibility of Staphylococcus aureus in a US pediatric population. Pediatrics 137: e20153099. doi: 10.1542/peds.2015-3099, PMID: [DOI] [PubMed] [Google Scholar]
- Svent-Kucina N., Pirs M., Kofol R., Blagus R., Smrke D. M., Bilban M., et al. (2016). Molecular characterization of Staphylococcus aureus isolates from skin and soft tissue infections samples and healthy carriers in the Central Slovenia region. APMIS 124, 309–318. doi: 10.1111/apm.12509, PMID: [DOI] [PubMed] [Google Scholar]
- Taha L., Stegger M., Soderquist B. (2019). Staphylococcus lugdunensis: antimicrobial susceptibility and optimal treatment options. Eur. J. Clin. Microbiol. Infect. Dis. 38, 1449–1455. doi: 10.1007/s10096-019-03571-6, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tahbaz S. V., Azimi L., Nowroozi J., Armin S., Fallah F. (2019). Multilocus sequence typing and antibiotic resistant patterns of the meticillin-resistant Staphylococcus aureus isolates from different clinical specimens. Rev. Res. Med. Microbiol. 30, 77–82. doi: 10.1097/MRM.0000000000000176 [DOI] [Google Scholar]
- Taherirad A., Jahanbakhsh R., Shakeri F., Anvary S., Ghaemi E. A. (2016). Staphylococcal cassette chromosome mec types among methicillin-resistant Staphylococcus aureus in northern Iran. Jundishapur J. Microbiol. 9:e33933, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Talapan D., Sandu A. M., Rafila A. (2023). Antimicrobial resistance of Staphylococcus aureus isolated between 2017 and 2022 from infections at a tertiary Care Hospital in Romania. Antibiotics (Basel) 12:974. doi: 10.3390/antibiotics12060974, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tang B., Gong T., Cui Y., Wang L., He C., Lu M., et al. (2020). Characteristics of oral methicillin-resistant Staphylococcus epidermidis isolated from dental plaque. Int. J. Oral Sci. 12:15. doi: 10.1038/s41368-020-0079-5, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tekeli A., Ocal D. N., Ozmen B. B., Karahan Z. C., Dolapci I. (2016). Molecular characterization of methicillin-resistant Staphylococcus aureus bloodstream isolates in a Turkish university hospital between 2002 and 2012. Microb. Drug Resist. 22, 564–569. doi: 10.1089/mdr.2015.0116, PMID: [DOI] [PubMed] [Google Scholar]
- Tong S. Y., Davis J. S., Eichenberger E., Holland T. L., Fowler V. G., Jr. (2015). Staphylococcus aureus infections: epidemiology, pathophysiology, clinical manifestations, and management. Clin. Microbiol. Rev. 28, 603–661. doi: 10.1128/CMR.00134-14, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tsige Y., Tadesse S., Eyesus T., Tefera M. M., Amsalu A., Menberu M. A. (2020). Prevalence of methicillin-resistant Staphylococcus aureus and associated risk factors among patients with wound infection at referral hospital, Northeast Ethiopia. J Pathog 2020:3168325. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ukpai E. G., Chukwura E. I., Moses I. B., Ugbo E. N., Agumah N. B., Okata-Nwali O. D., et al. (2021). Prevalence and Antibiogram of healthcare-associated methicillin-resistant Staphylococcus aureus (HA-MRSA) in Ebonyi state, Nigeria. Int. J. Pharma. Sci. Rev. Res. 69, 104–111. doi: 10.47583/ijpsrr.2021.v69i01.016 [DOI] [Google Scholar]
- Ullah H., Bashir K., Idrees M., Ullah A., Hassan N., Khan S., et al. (2022). Phylogenetic analysis and antimicrobial susceptibility profile of uropathogens. PLoS One 17:e0262952. doi: 10.1371/journal.pone.0262952, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Uyar Güleç G., Öncü S., Bozdoğan B., Öztürk B., Ertuğrul B., Sakarya S. (2020). Phenotypic and molecular detection of macrolide lincosamide streptogramin B resistance in clinical isolates of staphylococci. FLORA 25, 190–196. doi: 10.5578/flora.68683 [DOI] [Google Scholar]
- Valle D. L., Paclibare P. A., Cabrera E. C., Rivera W. L. (2016). Molecular and phenotypic characterization of methicillin-resistant Staphylococcus aureus isolates from a tertiary hospital in the Philippines. Trop Med Health 44:3. doi: 10.1186/s41182-016-0003-z, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Viechtbauer W. (2010). Conducting Meta-analyses in R with the meta for Package. J. Stat. Softw. 36, 1–48. doi: 10.18637/jss.v036.i03, PMID: 39902325 [DOI] [Google Scholar]
- Viechtbauer W., Cheung M. W. (2010). Outlier and influence diagnostics for meta-analysis. Res. Synth. Methods 1, 112–125. doi: 10.1002/jrsm.11, PMID: [DOI] [PubMed] [Google Scholar]
- Vijay S., Dalela G. (2016). Prevalence of LRTI in patients presenting with productive cough and their antibiotic resistance pattern. J. Clin. Diagn. Res. 10, DC09–DC12. doi: 10.7860/JCDR/2016/17855.7082, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wan T. W., Hung W. C., Tsai J. C., Lin Y. T., Lee H., Hsueh P. R., et al. (2016). Novel structure of Enterococcus faecium-originated ermB-positive Tn1546-like element in Staphylococcus aureus. Antimicrob. Agents Chemother. 60, 6108–6114. doi: 10.1128/AAC.01096-16, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang R., Li X., Wang Q., Zhang Y., Wang H. (2017). Microbiological characteristics and clinical features of cardiac implantable electronic device infections at a tertiary Hospital in China. Front. Microbiol. 8:360. doi: 10.3389/fmicb.2017.00360 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wangai F. K., Masika M. M., Lule G. N., Karari E. M., Maritim M. C., Jaoko W. G., et al. (2019). Bridging antimicrobial resistance knowledge gaps: the east African perspective on a global problem. PLoS One 14:e0212131. doi: 10.1371/journal.pone.0212131, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Washington J. A., Wilson W. R. (1985). Erythromycin: a microbial and clinical perspective after 30 years of clinical use (1). Mayo Clin Proc. 1985 60:189–203. doi: 10.1016/s0025-6196(12)60219-5 [DOI] [PubMed] [Google Scholar]
- Weldu Y., Naizgi M., Hadgu A., Desta A. A., Kahsay A., Negash L., et al. (2020). Neonatal septicemia at intensive care unit, Ayder comprehensive specialized hospital, Tigray, North Ethiopia: bacteriological profile, drug susceptibility pattern, and associated factors. PLoS One 15:e0235391. doi: 10.1371/journal.pone.0235391, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wurster J. I., Bispo P. J. M., Van Tyne D., Cadorette J. J., Boody R., Gilmore M. S. (2018). Staphylococcus aureus from ocular and otolaryngology infections are frequently resistant to clinically important antibiotics and are associated with lineages of community and hospital origins. PLoS One 13:e0208518. doi: 10.1371/journal.pone.0208518, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Xie X., Bao Y., Ouyang N., Dai X., Pan K., Chen B., et al. (2016). Molecular epidemiology and characteristic of virulence gene of community-acquired and hospital-acquired methicillin-resistant Staphylococcus aureus isolates in Sun Yat-sen memorial hospital, Guangzhou, southern China. BMC Infect. Dis. 16:339. doi: 10.1186/s12879-016-1684-y, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Xu Z., Liu S., Chen L., Liu Y., Tan L., Shen J., et al. (2019). Antimicrobial resistance and molecular characterization of methicillin-resistant coagulase-negative staphylococci from public shared bicycles in Tianjin, China. J. Glob. Antimicrob. Resist 19, 231–235. doi: 10.1016/j.jgar.2019.03.008, PMID: [DOI] [PubMed] [Google Scholar]
- Xu X., Zhang X., Zhang G., Abbasi Tadi D. (2024). Prevalence of antibiotic resistance of Staphylococcus aureus in cystic fibrosis infection: a systematic review and meta-analysis. J. Glob. Antimicrob. Resist. 36, 419–425. doi: 10.1016/j.jgar.2023.05.006, PMID: [DOI] [PubMed] [Google Scholar]
- Yadav S., Kapley A. (2021). Antibiotic resistance: global health crisis and metagenomics. Biotechnol. Rep. (Amst.) 29:e00604. doi: 10.1016/j.btre.2021.e00604 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yang H., Wang W. S., Tan Y., Zhang D. J., Wu J. J., Lei X. (2017). Investigation and analysis of the characteristics and drug sensitivity of bacteria in skin ulcer infections. Chin. J. Traumatol. 20, 194–197. doi: 10.1016/j.cjtee.2016.09.005, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yao Z., Wu Y., Xu H., Lei Y., Long W., Li M., et al. (2023). Prevalence and clinical characteristics of methicillin-resistant Staphylococcus aureus infections among dermatology inpatients: a 7-year retrospective study at a tertiary care center in Southwest China. Front. Public Health 11:1124930. doi: 10.3389/fpubh.2023.1124930, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yitayeh L., Gize A., Kassa M., Neway M., Afework A., Kibret M., et al. (2021). Antibiogram profiles of Bacteria isolated from different body site infections among patients admitted to GAMBY teaching general hospital, Northwest Ethiopia. Infect Drug Resist 14, 2225–2232. doi: 10.2147/IDR.S307267, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yu W., Kim H. K., Rauch S., Schneewind O., Missiakas D. (2017). Pathogenic conversion of coagulase-negative staphylococci. Microbes Infect. 19, 101–109. doi: 10.1016/j.micinf.2016.12.002, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zamanian M. H., Shirvani M., Janbakhsh A., Sayad B., Vaziri S., Mohseni Afshar Z., et al. (2021). Antibiotic Resistance in Staphylococcus aureus in Patients Hospitalized in Imam Reza Hospital of Kermanshah, Iran (2016–2018). J. Kermanshah Univ. Med. Sci. 25:e118807. [Google Scholar]
- Zhang J., Gu F. F., Zhao S. Y., Xiao S. Z., Wang Y. C., Guo X. K., et al. (2015). Prevalence and molecular epidemiology of Staphylococcus aureus among residents of seven nursing homes in Shanghai. PLoS One 10:e0137593. doi: 10.1371/journal.pone.0137593, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhou K., Sun F., Xu X. L., Hao X. K., Liu J. Y. (2020). Prevalences and characteristics of cultivable nasal bacteria isolated from preclinical medical students. J. Int. Med. Res. 48:300060520961716. doi: 10.1177/0300060520961716, PMID: [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding authors.






