Abstract
A DNA copy of influenza B/Singapore/222/79 viral RNA segment 5, containing the gene coding for the nucleoprotein (NP), has been cloned in Escherichia coli plasmid pBR322, and its nucleotide sequence has been determined. The influenza B NP gene contains 1,839 nucleotides and codes for a protein of 560 amino acids with a molecular weight of 61,593. Comparison of the influenza B NP amino acid sequence with that of influenza A NP (A/PR/8/34) reveals 37% direct homology in the aligned regions, indicating a common ancestor. However, influenza B NP has an additional 50 amino acids at its N-terminal end. As is the case with influenza A NP, influenza B NP is a basic protein, with its charged residues relatively evenly distributed rather than clustered. The structural homology suggests functional similarity between the NP of influenza A and B viruses.
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- Baez M., Taussig R., Zazra J. J., Young J. F., Palese P., Reisfeld A., Skalka A. M. Complete nucleotide sequence of the influenza A/PR/8/34 virus NS gene and comparison with the NS genes of the A/Udorn/72 and A/FPV/Rostock/34 strains. Nucleic Acids Res. 1980 Dec 11;8(23):5845–5858. doi: 10.1093/nar/8.23.5845. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bishop D. H., Roy P., Bean W. J., Jr, Simpson R. W. Transcription of the influenza ribonucleic acid genome by a virion polymerase. 3. Completeness of the transcription process. J Virol. 1972 Oct;10(4):689–697. doi: 10.1128/jvi.10.4.689-697.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Briedis D. J., Lamb R. A., Choppin P. W. Sequence of RNA segment 7 of the influenza B virus genome: partial amino acid homology between the membrane proteins (M1) of influenza A and B viruses and conservation of a second open reading frame. Virology. 1982 Jan 30;116(2):581–588. doi: 10.1016/0042-6822(82)90150-7. [DOI] [PubMed] [Google Scholar]
- Briedis D. J., Lamb R. A. Influenza B virus genome: sequences and structural organization of RNA segment 8 and the mRNAs coding for the NS1 and NS2 proteins. J Virol. 1982 Apr;42(1):186–193. doi: 10.1128/jvi.42.1.186-193.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Davis A. R., Hiti A. L., Nayak D. P. Construction and characterization of a bacterial clone containing the hemagglutinin gene of the WSN strain (HON1) of influenza virus. Gene. 1980 Aug;10(3):205–218. doi: 10.1016/0378-1119(80)90050-5. [DOI] [PubMed] [Google Scholar]
- Desselberger U., Racaniello V. R., Zazra J. J., Palese P. The 3' and 5'-terminal sequences of influenza A, B and C virus RNA segments are highly conserved and show partial inverted complementarity. Gene. 1980 Feb;8(3):315–328. doi: 10.1016/0378-1119(80)90007-4. [DOI] [PubMed] [Google Scholar]
- Fields S., Winter G. Nucleotide sequences of influenza virus segments 1 and 3 reveal mosaic structure of a small viral RNA segment. Cell. 1982 Feb;28(2):303–313. doi: 10.1016/0092-8674(82)90348-8. [DOI] [PubMed] [Google Scholar]
- Guo Y. J., Jin F. G., Wang P., Wang M., Zhu J. M. Isolation of influenza C virus from pigs and experimental infection of pigs with influenza C virus. J Gen Virol. 1983 Jan;64(Pt 1):177–182. doi: 10.1099/0022-1317-64-1-177. [DOI] [PubMed] [Google Scholar]
- Hiti A. L., Davis A. R., Nayak D. P. Complete sequence analysis shows that the hemagglutinins of the H0 and H2 subtypes of human influenza virus are closely related. Virology. 1981 May;111(1):113–124. doi: 10.1016/0042-6822(81)90658-9. [DOI] [PubMed] [Google Scholar]
- Huddleston J. A., Brownlee G. G. The sequence of the nucleoprotein gene of human influenza A virus, strain A/NT/60/68. Nucleic Acids Res. 1982 Feb 11;10(3):1029–1038. doi: 10.1093/nar/10.3.1029. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kaptein J. S., Nayak D. P. Complete nucleotide sequence of the polymerase 3 gene of human influenza virus A/WSN/33. J Virol. 1982 Apr;42(1):55–63. doi: 10.1128/jvi.42.1.55-63.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Krug R. M., Ueda M., Palese P. Temperature-sensitive mutants of influenza WSN virus defective in virus-specific RNA synthesis. J Virol. 1975 Oct;16(4):790–796. doi: 10.1128/jvi.16.4.790-796.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Krystal M., Elliott R. M., Benz E. W., Jr, Young J. F., Palese P. Evolution of influenza A and B viruses: conservation of structural features in the hemagglutinin genes. Proc Natl Acad Sci U S A. 1982 Aug;79(15):4800–4804. doi: 10.1073/pnas.79.15.4800. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lin B. C., Lai C. J. The influenza virus nucleoprotein synthesized from cloned DNA in a simian virus 40 vector is detected in the nucleus. J Virol. 1983 Jan;45(1):434–438. doi: 10.1128/jvi.45.1.434-438.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maxam A. M., Gilbert W. A new method for sequencing DNA. Proc Natl Acad Sci U S A. 1977 Feb;74(2):560–564. doi: 10.1073/pnas.74.2.560. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Maxam A. M., Gilbert W. Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 1980;65(1):499–560. doi: 10.1016/s0076-6879(80)65059-9. [DOI] [PubMed] [Google Scholar]
- Palese P., Young J. F. Variation of influenza A, B, and C viruses. Science. 1982 Mar 19;215(4539):1468–1474. doi: 10.1126/science.7038875. [DOI] [PubMed] [Google Scholar]
- Racaniello V. R., Palese P. Influenza B virus genome: assignment of viral polypeptides to RNA segments. J Virol. 1979 Jan;29(1):361–373. doi: 10.1128/jvi.29.1.361-373.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rees P. J., Dimmock N. J. Electrophoretic separation of influenza virus ribonucleoproteins. J Gen Virol. 1981 Mar;53(Pt 1):125–132. doi: 10.1099/0022-1317-53-1-125. [DOI] [PubMed] [Google Scholar]
- Robertson J. S., Schubert M., Lazzarini R. A. Polyadenylation sites for influenza virus mRNA. J Virol. 1981 Apr;38(1):157–163. doi: 10.1128/jvi.38.1.157-163.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rochovansky O. M. RNA synthesis by ribonucleoprotein-polymerase complexes isolated from influenza virus. Virology. 1976 Sep;73(2):327–338. doi: 10.1016/0042-6822(76)90394-9. [DOI] [PubMed] [Google Scholar]
- Selimova L. M., Zaides V. M., Zhdanov V. M. Disulfide bonding in influenza virus proteins as revealed by polyacrylamide gel electrophoresis. J Virol. 1982 Nov;44(2):450–457. doi: 10.1128/jvi.44.2.450-457.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shaw M. W., Lamb R. A., Erickson B. W., Briedis D. J., Choppin P. W. Complete nucleotide sequence of the neuraminidase gene of influenza B virus. Proc Natl Acad Sci U S A. 1982 Nov;79(22):6817–6821. doi: 10.1073/pnas.79.22.6817. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Thierry F., Danos O. Use of specific single stranded DNA probes cloned in M13 to study the RNA synthesis of four temperature-sensitive mutants of HK/68 influenza virus. Nucleic Acids Res. 1982 May 11;10(9):2925–2938. doi: 10.1093/nar/10.9.2925. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Thierry F., Spring S. B., Chanock R. M. Localization of the Ts defect in two Ts mutants of influenza A virus: evidence for the occurrence of intracistronic complementation between Ts mutants of influenza A virus coding for the neuraminidase and nucleoprotein polypeptides. Virology. 1980 Mar;101(2):484–492. doi: 10.1016/0042-6822(80)90462-6. [DOI] [PubMed] [Google Scholar]
- Ueda M., Tobita K., Sugiura A., Enomoto C. Identification of hemagglutinin and neuraminidase genes of influenza B virus. J Virol. 1978 Feb;25(2):685–686. doi: 10.1128/jvi.25.2.685-686.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van Rompuy L., Min Jou W., Huylebroeck D., Devos R., Fiers W. Complete nucleotide sequence of the nucleoprotein gene from the human influenza strain A/PR/8/34 (HON1). Eur J Biochem. 1981 May 15;116(2):347–353. doi: 10.1111/j.1432-1033.1981.tb05341.x. [DOI] [PubMed] [Google Scholar]
- Webster R. G., Laver W. G., Air G. M., Schild G. C. Molecular mechanisms of variation in influenza viruses. Nature. 1982 Mar 11;296(5853):115–121. doi: 10.1038/296115a0. [DOI] [PubMed] [Google Scholar]
- Winter G., Fields S., Brownlee G. G. Nucleotide sequence of the haemagglutinin gene of a human influenza virus H1 subtype. Nature. 1981 Jul 2;292(5818):72–75. doi: 10.1038/292072a0. [DOI] [PubMed] [Google Scholar]
- Winter G., Fields S. Cloning of influenza cDNA ino M13: the sequence of the RNA segment encoding the A/PR/8/34 matrix protein. Nucleic Acids Res. 1980 May 10;8(9):1965–1974. doi: 10.1093/nar/8.9.1965. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Winter G., Fields S. The structure of the gene encoding the nucleoprotein of human influenza virus A/PR/8/34. Virology. 1981 Oct 30;114(2):423–428. doi: 10.1016/0042-6822(81)90223-3. [DOI] [PubMed] [Google Scholar]
- van Wyke K. L., Bean W. J., Jr, Webster R. G. Monoclonal antibodies to the influenza A virus nucleoprotein affecting RNA transcription. J Virol. 1981 Jul;39(1):313–317. doi: 10.1128/jvi.39.1.313-317.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]