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. 1985 Dec;49(4):379–397. doi: 10.1128/mr.49.4.379-397.1985

Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.

M J Fournier, H Ozeki
PMCID: PMC373044  PMID: 2419743

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Selected References

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  1. Altman S., Model P., Dixon G. H., Wosnick N. A. An E. coli gene coding for a protamine-like protein. Cell. 1981 Nov;26(3 Pt 1):299–304. doi: 10.1016/0092-8674(81)90198-7. [DOI] [PubMed] [Google Scholar]
  2. Altman S., Smith J. D. Tyrosine tRNA precursor molecule polynucleotide sequence. Nat New Biol. 1971 Sep 8;233(36):35–39. doi: 10.1038/newbio233035a0. [DOI] [PubMed] [Google Scholar]
  3. An G., Friesen J. D. The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli. Gene. 1980 Dec;12(1-2):33–39. doi: 10.1016/0378-1119(80)90013-x. [DOI] [PubMed] [Google Scholar]
  4. Bachmann B. J. Linkage map of Escherichia coli K-12, edition 7. Microbiol Rev. 1983 Jun;47(2):180–230. doi: 10.1128/mr.47.2.180-230.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Berman M. L., Beckwith J. Fusions of the lac operon to the transfer RNA gene tyrT of Escherichia coli. J Mol Biol. 1979 May 25;130(3):285–301. doi: 10.1016/0022-2836(79)90542-4. [DOI] [PubMed] [Google Scholar]
  6. Bossi L., Smith D. M. Conformational change in the DNA associated with an unusual promoter mutation in a tRNA operon of Salmonella. Cell. 1984 Dec;39(3 Pt 2):643–652. doi: 10.1016/0092-8674(84)90471-9. [DOI] [PubMed] [Google Scholar]
  7. Bossi L. The hisR locus of Salmonella: nucleotide sequence and expression. Mol Gen Genet. 1983;192(1-2):163–170. doi: 10.1007/BF00327662. [DOI] [PubMed] [Google Scholar]
  8. Brenner D. J., Fournier M. J., Doctor B. P. Isolation and partial characterization of the transfer ribonucleic acid cistrons from Escherichia coli. Nature. 1970 Aug 1;227(5257):448–451. doi: 10.1038/227448a0. [DOI] [PubMed] [Google Scholar]
  9. Brenner M., Ames B. N. Histidine regulation in Salmonella typhimurium. IX. Histidine transfer ribonucleic acid of the regulatory mutants. J Biol Chem. 1972 Feb 25;247(4):1080–1088. [PubMed] [Google Scholar]
  10. Brosius J., Dull T. J., Sleeter D. D., Noller H. F. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol. 1981 May 15;148(2):107–127. doi: 10.1016/0022-2836(81)90508-8. [DOI] [PubMed] [Google Scholar]
  11. Brown S., Fournier M. J. The 4.5 S RNA gene of Escherichia coli is essential for cell growth. J Mol Biol. 1984 Sep 25;178(3):533–550. doi: 10.1016/0022-2836(84)90237-7. [DOI] [PubMed] [Google Scholar]
  12. Butler E. T., Chamberlin M. J. Bacteriophage SP6-specific RNA polymerase. I. Isolation and characterization of the enzyme. J Biol Chem. 1982 May 25;257(10):5772–5778. [PubMed] [Google Scholar]
  13. Caillet J., Plumbridge J. A., Springer M., Vacher J., Delamarche C., Buckingham R. H., Grunberg-Manago M. Identification of clones carrying an E. coli tRNAPhe gene by suppression of phenylalanyl-tRNA synthetase thermosensitive mutants. Nucleic Acids Res. 1983 Feb 11;11(3):727–736. doi: 10.1093/nar/11.3.727. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Campen R. K., Duester G. L., Holmes W. M., Young J. M. Organization of transfer ribonucleic acid genes in the Escherichia coli chromosome. J Bacteriol. 1980 Dec;144(3):1083–1093. doi: 10.1128/jb.144.3.1083-1093.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Contreras R., Küpper H., Landy A., Khorana H. G. Escherichia coli tyrosine transfer ribonucleic acid genes. Nucleotide sequences of their promoters and of the regions adjoining C-C-A ends. J Biol Chem. 1976 Sep 10;251(17):5124–5140. [PubMed] [Google Scholar]
  16. Demerec M., Adelberg E. A., Clark A. J., Hartman P. E. A proposal for a uniform nomenclature in bacterial genetics. Genetics. 1966 Jul;54(1):61–76. doi: 10.1093/genetics/54.1.61. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Duester G. L., Holmes W. M. The distal end of the ribosomal RNA operon rrnD of Escherichia coli contains a tRNA1thr gene, two 5s rRNA genes and a transcription terminator. Nucleic Acids Res. 1980 Sep 11;8(17):3793–3807. doi: 10.1093/nar/8.17.3793. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Duester G., Campen R. K., Holmes W. M. Nucleotide sequence of an Escherichia coli tRNA (Leu 1) operon and identification of the transcription promoter signal. Nucleic Acids Res. 1981 May 11;9(9):2121–2139. doi: 10.1093/nar/9.9.2121. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Duester G., Elford R. M., Holmes W. M. Fusion of the Escherichia coli tRNALeu1 promoter to the galK gene: analysis of sequences necessary for growth-rate-dependent regulation. Cell. 1982 Oct;30(3):855–864. doi: 10.1016/0092-8674(82)90290-2. [DOI] [PubMed] [Google Scholar]
  20. Egan J., Landy A. Structural analysis of the tRNA1Tyr gene of Escherichia coli. A 178 base pair sequence that is repeated 3.14 times. J Biol Chem. 1978 May 25;253(10):3607–3622. [PubMed] [Google Scholar]
  21. Ellwood M., Nomura M. Chromosomal locations of the genes for rRNA in Escherichia coli K-12. J Bacteriol. 1982 Feb;149(2):458–468. doi: 10.1128/jb.149.2.458-468.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Fleck E. W., Carbon J. Multiple gene loci for a single species of glycine transfer ribonucleic acid. J Bacteriol. 1975 May;122(2):492–501. doi: 10.1128/jb.122.2.492-501.1975. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Fournier M. J., Miller W. L., Doctor B. P. Clustering of tRNA cistrons in Escherichia coli DNA. Biochem Biophys Res Commun. 1974 Oct 8;60(3):1148–1154. doi: 10.1016/0006-291x(74)90432-x. [DOI] [PubMed] [Google Scholar]
  24. Fournier M. J., Webb E., Tang S. In vitro biosynthesis of functional Escherichia coli su3+ tyrosine transfer RNA. Biochemistry. 1977 Aug 9;16(16):3608–3618. doi: 10.1021/bi00635a017. [DOI] [PubMed] [Google Scholar]
  25. Fukada K., Abelson J. DNA sequence of a T4 transfer RNA gene cluster. J Mol Biol. 1980 May 25;139(3):377–391. doi: 10.1016/0022-2836(80)90136-9. [DOI] [PubMed] [Google Scholar]
  26. Gallagher P. J., Schwartz I., Elseviers D. Genetic mapping of pheU, an Escherichia coli gene for phenylalanine tRNA. J Bacteriol. 1984 May;158(2):762–763. doi: 10.1128/jb.158.2.762-763.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Gallant J. A. Stringent control in E. coli. Annu Rev Genet. 1979;13:393–415. doi: 10.1146/annurev.ge.13.120179.002141. [DOI] [PubMed] [Google Scholar]
  28. Gegenheimer P., Apirion D. Processing of procaryotic ribonucleic acid. Microbiol Rev. 1981 Dec;45(4):502–541. doi: 10.1128/mr.45.4.502-541.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Ghysen A., Celis J. E. Joint transcription of two tRNA1Tyr genes from Escherichia coli. Nature. 1974 May 31;249(456):418–421. doi: 10.1038/249418a0. [DOI] [PubMed] [Google Scholar]
  30. Gouy M., Gautier C. Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Res. 1982 Nov 25;10(22):7055–7074. doi: 10.1093/nar/10.22.7055. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Hagerman P. J. Evidence for the existence of stable curvature of DNA in solution. Proc Natl Acad Sci U S A. 1984 Aug;81(15):4632–4636. doi: 10.1073/pnas.81.15.4632. [DOI] [PMC free article] [PubMed] [Google Scholar]
  32. Hawley D. K., McClure W. R. Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res. 1983 Apr 25;11(8):2237–2255. doi: 10.1093/nar/11.8.2237. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Holmes W. M., Platt T., Rosenberg M. Termination of transcription in E. coli. Cell. 1983 Apr;32(4):1029–1032. doi: 10.1016/0092-8674(83)90287-8. [DOI] [PubMed] [Google Scholar]
  34. Hsu L. M., Klee H. J., Zagorski J., Fournier M. J. Structure of an Escherichia coli tRNA operon containing linked genes for arginine, histidine, leucine, and proline tRNAs. J Bacteriol. 1984 Jun;158(3):934–942. doi: 10.1128/jb.158.3.934-942.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Hsu L. M., Zagorski J., Fournier M. J. Cloning and sequence analysis of the Escherichia coli 4.5 S RNA gene. J Mol Biol. 1984 Sep 25;178(3):509–531. doi: 10.1016/0022-2836(84)90236-5. [DOI] [PubMed] [Google Scholar]
  36. Hsu L. M., Zagorski J., Wang Z., Fournier M. J. Escherichia coli 6S RNA gene is part of a dual-function transcription unit. J Bacteriol. 1985 Mar;161(3):1162–1170. doi: 10.1128/jb.161.3.1162-1170.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Hudson L., Rossi J., Landy A. Dual function transcripts specifying tRNA and mRNA. Nature. 1981 Dec 3;294(5840):422–427. doi: 10.1038/294422a0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  38. Ikemura T. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes. J Mol Biol. 1981 Feb 15;146(1):1–21. doi: 10.1016/0022-2836(81)90363-6. [DOI] [PubMed] [Google Scholar]
  39. Ikemura T. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. J Mol Biol. 1981 Sep 25;151(3):389–409. doi: 10.1016/0022-2836(81)90003-6. [DOI] [PubMed] [Google Scholar]
  40. Ikemura T., Dahlberg J. E. Small ribonucleic acids of Escherichia coli. II. Noncoordinate accumulation during stringent control. J Biol Chem. 1973 Jul 25;248(14):5033–5041. [PubMed] [Google Scholar]
  41. Ikemura T., Ozeki H. Codon usage and transfer RNA contents: organism-specific codon-choice patterns in reference to the isoacceptor contents. Cold Spring Harb Symp Quant Biol. 1983;47(Pt 2):1087–1097. doi: 10.1101/sqb.1983.047.01.123. [DOI] [PubMed] [Google Scholar]
  42. Ikemura T., Ozeki H. Gross map location of Escherichia coli transfer RNA genes. J Mol Biol. 1977 Dec 5;117(2):419–446. doi: 10.1016/0022-2836(77)90136-x. [DOI] [PubMed] [Google Scholar]
  43. Ikemura T., Shimura Y., Sakano H., Ozeki H. Precursor molecules of Escherichia coli transfer RNAs accumulated in a temperature-sensitive mutant. J Mol Biol. 1975 Jul 25;96(1):69–86. doi: 10.1016/0022-2836(75)90182-5. [DOI] [PubMed] [Google Scholar]
  44. Ilgen C., Kirk L. L., Carbon J. Isolation and characterization of large transfer ribonucleic acid precursors from Escherichia coli. J Biol Chem. 1976 Feb 25;251(4):922–929. [PubMed] [Google Scholar]
  45. Inokuchi H., Kodaira M., Yamao F., Ozeki H. Identification of transfer RNA suppressors in Escherichia coli. II. Duplicate genes for tRNA2Gln. J Mol Biol. 1979 Aug 25;132(4):663–677. doi: 10.1016/0022-2836(79)90381-4. [DOI] [PubMed] [Google Scholar]
  46. Inokuchi H., Yamao F., Sakano H., Ozeki H. Identification of transfer RNA suppressors in Escherichia coli. I. Amber suppressor su+2, an anticodon mutant of tRNA2Gln. J Mol Biol. 1979 Aug 25;132(4):649–662. doi: 10.1016/0022-2836(79)90380-2. [DOI] [PubMed] [Google Scholar]
  47. Ishii S., Ihara M., Maekawa T., Nakamura Y., Uchida H., Imamoto F. The nucleotide sequence of the cloned nusA gene and its flanking region of Escherichia coli. Nucleic Acids Res. 1984 Apr 11;12(7):3333–3342. doi: 10.1093/nar/12.7.3333. [DOI] [PMC free article] [PubMed] [Google Scholar]
  48. Ishii S., Kuroki K., Imamoto F. tRNAMetf2 gene in the leader region of the nusA operon in Escherichia coli. Proc Natl Acad Sci U S A. 1984 Jan;81(2):409–413. doi: 10.1073/pnas.81.2.409. [DOI] [PMC free article] [PubMed] [Google Scholar]
  49. Jinks-Robertson S., Gourse R. L., Nomura M. Expression of rRNA and tRNA genes in Escherichia coli: evidence for feedback regulation by products of rRNA operons. Cell. 1983 Jul;33(3):865–876. doi: 10.1016/0092-8674(83)90029-6. [DOI] [PubMed] [Google Scholar]
  50. Kassavetis G. A., Butler E. T., Roulland D., Chamberlin M. J. Bacteriophage SP6-specific RNA polymerase. II. Mapping of SP6 DNA and selective in vitro transcription. J Biol Chem. 1982 May 25;257(10):5779–5788. [PubMed] [Google Scholar]
  51. Kuchino Y., Mori F., Nishimura S. Structure and transcription of the tRNAPro1 gene from Escherichia coli. Nucleic Acids Res. 1985 May 10;13(9):3213–3220. doi: 10.1093/nar/13.9.3213. [DOI] [PMC free article] [PubMed] [Google Scholar]
  52. Küpper H., Contreras R., Landy A., Khorana H. G. Promoter-dependent transcription of tRNAITyr genes using DNA fragments produced by restriction enzymes. Proc Natl Acad Sci U S A. 1975 Dec;72(12):4754–4758. doi: 10.1073/pnas.72.12.4754. [DOI] [PMC free article] [PubMed] [Google Scholar]
  53. Küpper H., Sekiya T., Rosenberg M., Egan J., Landy A. A rho-dependent termination site in the gene coding for tyrosine tRNA su3 of Escherichia coli. Nature. 1978 Mar 30;272(5652):423–428. doi: 10.1038/272423a0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  54. Lamond A. I., Travers A. A. Requirement for an upstream element for optimal transcription of a bacterial tRNA gene. Nature. 1983 Sep 15;305(5931):248–250. doi: 10.1038/305248a0. [DOI] [PubMed] [Google Scholar]
  55. Lee C. A., Fournier M. J., Beckwith J. Escherichia coli 6S RNA is not essential for growth or protein secretion. J Bacteriol. 1985 Mar;161(3):1156–1161. doi: 10.1128/jb.161.3.1156-1161.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  56. Lee J. S., An G., Friesen J. D., Fill N. P. Location of the tufB promoter of E. coli: cotranscription of tufB with four transfer RNA genes. Cell. 1981 Jul;25(1):251–258. doi: 10.1016/0092-8674(81)90250-6. [DOI] [PubMed] [Google Scholar]
  57. McAllister W. T., Morris C., Rosenberg A. H., Studier F. W. Utilization of bacteriophage T7 late promoters in recombinant plasmids during infection. J Mol Biol. 1981 Dec 15;153(3):527–544. doi: 10.1016/0022-2836(81)90406-x. [DOI] [PubMed] [Google Scholar]
  58. McCorkle G. M., Altman S. Large deletion mutants of Escherichia coli tRNATyr1. J Mol Biol. 1982 Feb 25;155(2):83–103. doi: 10.1016/0022-2836(82)90438-7. [DOI] [PubMed] [Google Scholar]
  59. Melton D. A., Krieg P. A., Rebagliati M. R., Maniatis T., Zinn K., Green M. R. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter. Nucleic Acids Res. 1984 Sep 25;12(18):7035–7056. doi: 10.1093/nar/12.18.7035. [DOI] [PMC free article] [PubMed] [Google Scholar]
  60. Miyajima A., Shibuya M., Kuchino Y., Kaziro Y. Transcription of the E. coli tufB gene: cotranscription with four tRNA genes and inhibition by guanosine-5'-diphosphate-3'-diphosphate. Mol Gen Genet. 1981;183(1):13–19. doi: 10.1007/BF00270131. [DOI] [PubMed] [Google Scholar]
  61. Mullin D. A., Garcia G. M., Walker J. R. An E. coli DNA fragment 118 base pairs in length provides dnaY+ complementing activity. Cell. 1984 Jun;37(2):669–674. doi: 10.1016/0092-8674(84)90399-4. [DOI] [PubMed] [Google Scholar]
  62. Nakajima N., Ozeki H., Shimura Y. In vitro transcription of the supB-E tRNA operon of Escherichia coli. Characterization of transcription products. J Biol Chem. 1982 Sep 25;257(18):11113–11120. [PubMed] [Google Scholar]
  63. Nakajima N., Ozeki H., Shimura Y. Organization and structure of an E. coli tRNA operon containing seven tRNA genes. Cell. 1981 Jan;23(1):239–249. doi: 10.1016/0092-8674(81)90288-9. [DOI] [PubMed] [Google Scholar]
  64. Nierlich D. P. Regulation of bacterial growth, RNA, and protein synthesis. Annu Rev Microbiol. 1978;32:393–432. doi: 10.1146/annurev.mi.32.100178.002141. [DOI] [PubMed] [Google Scholar]
  65. Nomura M., Gourse R., Baughman G. Regulation of the synthesis of ribosomes and ribosomal components. Annu Rev Biochem. 1984;53:75–117. doi: 10.1146/annurev.bi.53.070184.000451. [DOI] [PubMed] [Google Scholar]
  66. Ray B. K., Apirion D. Transfer RNA precursors are accumulated in Escherichia coli in the absence of RNase E. Eur J Biochem. 1981 Mar;114(3):517–524. doi: 10.1111/j.1432-1033.1981.tb05175.x. [DOI] [PubMed] [Google Scholar]
  67. Rosenberg M., Court D. Regulatory sequences involved in the promotion and termination of RNA transcription. Annu Rev Genet. 1979;13:319–353. doi: 10.1146/annurev.ge.13.120179.001535. [DOI] [PubMed] [Google Scholar]
  68. Rossi J. J., Landy A. Structure and organization of the two tRNATyr gene clusters on the E. coli chromosome. Cell. 1979 Mar;16(3):523–534. doi: 10.1016/0092-8674(79)90027-8. [DOI] [PubMed] [Google Scholar]
  69. Rossi J., Egan J., Hudson L., Landy A. The tyrT locus: termination and processing of a complex transcript. Cell. 1981 Nov;26(3 Pt 1):305–314. doi: 10.1016/0092-8674(81)90199-9. [DOI] [PubMed] [Google Scholar]
  70. Russell R. L., Abelson J. N., Landy A., Gefter M. L., Brenner S., Smith J. D. Duplicate genes for tyrosine transfer RNA in Escherichia coli. J Mol Biol. 1970 Jan 14;47(1):1–13. doi: 10.1016/0022-2836(70)90397-9. [DOI] [PubMed] [Google Scholar]
  71. Sakano H., Shimura Y. Characterization and in vitro processing of transfer RNA precursors accumulated in a temperature-sensitive mutant of Escherichia coli. J Mol Biol. 1978 Aug 15;123(3):287–326. doi: 10.1016/0022-2836(78)90082-7. [DOI] [PubMed] [Google Scholar]
  72. Sanderson K. E., Roth J. R. Linkage map of Salmonella typhimurium, Edition VI. Microbiol Rev. 1983 Sep;47(3):410–453. doi: 10.1128/mr.47.3.410-453.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  73. Schwartz I., Klotsky R. A., Elseviers D., Gallagher P. J., Krauskopf M., Siddiqui M. A., Wong J. F., Roe B. A. Molecular cloning and sequencing of pheU, a gene for Escherichia coli tRNAPhe. Nucleic Acids Res. 1983 Jul 11;11(13):4379–4389. doi: 10.1093/nar/11.13.4379. [DOI] [PMC free article] [PubMed] [Google Scholar]
  74. Sekiya T., Mori M., Takahashi N., Nishimura S. Sequence of the distal tRNA1Asp gene and the transcription termination signal in the Escherichia coli ribosomal RNA operon rrnF(or G). Nucleic Acids Res. 1980 Sep 11;8(17):3809–3827. doi: 10.1093/nar/8.17.3809. [DOI] [PMC free article] [PubMed] [Google Scholar]
  75. Sekiya T., Nishimura S. Sequence of the gene for isoleucine tRNA1 and the surrounding region in a ribosomal RNA operon of Escherichia coli. Nucleic Acids Res. 1979 Feb;6(2):575–592. doi: 10.1093/nar/6.2.575. [DOI] [PMC free article] [PubMed] [Google Scholar]
  76. Skjold A. C., Juarez H., Hedgcoth C. Relationships among deoxyribonucleic acid, ribonucleic acid, and specific transfer ribonucleic acids in Escherichia coli 15T - at various growth rates. J Bacteriol. 1973 Jul;115(1):177–187. doi: 10.1128/jb.115.1.177-187.1973. [DOI] [PMC free article] [PubMed] [Google Scholar]
  77. Sprinzl M., Gauss D. H. Compilation of sequences of tRNA genes. Nucleic Acids Res. 1984;12 (Suppl):r59–131. doi: 10.1093/nar/12.suppl.r59. [DOI] [PMC free article] [PubMed] [Google Scholar]
  78. Sprinzl M., Gauss D. H. Compilation of tRNA sequences. Nucleic Acids Res. 1984;12 (Suppl):r1–57. [PMC free article] [PubMed] [Google Scholar]
  79. Squires C., Carbon J., Hill C. W. Glycine transfer RNA of Escherichia coli. I. Structural genes for two glycine tRNA species. J Mol Biol. 1970 Sep 28;52(3):557–569. doi: 10.1016/0022-2836(70)90419-5. [DOI] [PubMed] [Google Scholar]
  80. Steege D. A. A nucleotide change in the anticodon of an Escherichia coli serine transfer RNA results in supD-amber suppression. Nucleic Acids Res. 1983 Jun 11;11(11):3823–3832. doi: 10.1093/nar/11.11.3823. [DOI] [PMC free article] [PubMed] [Google Scholar]
  81. Steege D. A., Horabin J. I. Temperature-inducible amber suppressor: construction of plasmids containing the Escherichia coli serU- (supD-) gene under control of the bacteriophage lambda pL promoter. J Bacteriol. 1983 Sep;155(3):1417–1425. doi: 10.1128/jb.155.3.1417-1425.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  82. Tamura F., Nishimura S., Ohki M. The E. coli divE mutation, which differentially inhibits synthesis of certain proteins, is in tRNASer1. EMBO J. 1984 May;3(5):1103–1107. doi: 10.1002/j.1460-2075.1984.tb01936.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  83. Thorbjarnardóttir S., Dingermann T., Rafnar T., Andrésson O. S., Söll D., Eggertsson G. Leucine tRNA family of Escherichia coli: nucleotide sequence of the supP(Am) suppressor gene. J Bacteriol. 1985 Jan;161(1):219–222. doi: 10.1128/jb.161.1.219-222.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  84. Thorbjarnardóttir S., Uemura H., Dingermann T., Rafnar T., Thorsteinsdóttir S., Söll D., Eggertsson G. Escherichia coli supH suppressor: temperature-sensitive missense suppression caused by an anticodon change in tRNASer2. J Bacteriol. 1985 Jan;161(1):207–211. doi: 10.1128/jb.161.1.207-211.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  85. Travers A. A. Conserved features of coordinately regulated E. coli promoters. Nucleic Acids Res. 1984 Mar 26;12(6):2605–2618. doi: 10.1093/nar/12.6.2605. [DOI] [PMC free article] [PubMed] [Google Scholar]
  86. Travers A. A., Lamond A. I., Mace H. A., Berman M. L. RNA polymerase interactions with the upstream region of the E. coli tyrT promoter. Cell. 1983 Nov;35(1):265–273. doi: 10.1016/0092-8674(83)90229-5. [DOI] [PubMed] [Google Scholar]
  87. Travers A. A., Lamond A. I., Mace H. A. PpGpp regulates the binding of two RNA polymerase molecules to the tyrT promoter. Nucleic Acids Res. 1982 Aug 25;10(16):5043–5057. doi: 10.1093/nar/10.16.5043. [DOI] [PMC free article] [PubMed] [Google Scholar]
  88. Travers A. A. Promoter sequence for stringent control of bacterial ribonucleic acid synthesis. J Bacteriol. 1980 Feb;141(2):973–976. doi: 10.1128/jb.141.2.973-976.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  89. Tucker S. D., Gopalakrishnan A. S., Bollinger R., Dowhan W., Murgola E. J. Molecular mapping of glyW, a duplicate gene for tRNA3Gly of Escherichia coli. J Bacteriol. 1982 Nov;152(2):773–779. doi: 10.1128/jb.152.2.773-779.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  90. VanBogelen R. A., Vaughn V., Neidhardt F. C. Gene for heat-inducible lysyl-tRNA synthetase (lysU) maps near cadA in Escherichia coli. J Bacteriol. 1983 Feb;153(2):1066–1068. doi: 10.1128/jb.153.2.1066-1068.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  91. Vold B. S. Structure and organization of genes for transfer ribonucleic acid in Bacillus subtilis. Microbiol Rev. 1985 Mar;49(1):71–80. doi: 10.1128/mr.49.1.71-80.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  92. Wu H. M., Crothers D. M. The locus of sequence-directed and protein-induced DNA bending. Nature. 1984 Apr 5;308(5959):509–513. doi: 10.1038/308509a0. [DOI] [PubMed] [Google Scholar]
  93. Yoshimura M., Inokuchi H., Ozeki H. Identification of transfer RNA suppressors in Escherichia coli. IV. Amber suppressor Su+6 a double mutant of a new species of leucine tRNA. J Mol Biol. 1984 Aug 25;177(4):627–644. doi: 10.1016/0022-2836(84)90041-x. [DOI] [PubMed] [Google Scholar]
  94. Yoshimura M., Kimura M., Ohno M., Inokuchi H., Ozeki H. Identification of transfer RNA suppressors in Escherichia coli. III. Ochre suppressors of lysine tRNA. J Mol Biol. 1984 Aug 25;177(4):609–625. doi: 10.1016/0022-2836(84)90040-8. [DOI] [PubMed] [Google Scholar]
  95. Young R. A., Macklis R., Steitz J. A. Sequence of the 16 S-23 s spacer region in two ribosomal RNA operons of Escherichia coli. J Biol Chem. 1979 May 10;254(9):3264–3271. [PubMed] [Google Scholar]
  96. Young R. A. Transcription termination in the Escherichia coli ribosomal RNA operon rrnC. J Biol Chem. 1979 Dec 25;254(24):12725–12731. [PubMed] [Google Scholar]
  97. von Hippel P. H., Bear D. G., Morgan W. D., McSwiggen J. A. Protein-nucleic acid interactions in transcription: a molecular analysis. Annu Rev Biochem. 1984;53:389–446. doi: 10.1146/annurev.bi.53.070184.002133. [DOI] [PubMed] [Google Scholar]

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