Skip to main content
The EMBO Journal logoLink to The EMBO Journal
. 1985 Oct;4(10):2597–2602. doi: 10.1002/j.1460-2075.1985.tb03976.x

beta s-Crystallin: structure and evolution of a distinct member of the beta gamma-superfamily.

Y Quax-Jeuken, H Driessen, J Leunissen, W Quax, W de Jong, H Bloemendal
PMCID: PMC554549  PMID: 4054100

Abstract

The nucleotide sequence of the cDNA of bovine lens beta s-crystallin has been determined, and the derived amino acid sequence has been confirmed by amino acid compositions and partial sequences of the tryptic peptides of this monomeric protein. beta s-Crystallin has a length of 177 residues, corresponding to a mol. wt. of 20 773, and a blocked N-terminal serine. Comparison of beta s with the known sequences of other beta- and gamma-crystallins, and computer construction of a phylogenetic tree of these sequences, shows beta s to be more closely related to the monomeric gamma-crystallins than to the oligomeric beta-crystallins. Also the tertiary structure of beta s modelled by interactive computer graphics on the coordinates of gamma II-crystallin, revealed similarities with the gamma-crystallins which might explain its monomeric behavior: the presence of a very short N-terminal 'arm' as compared with the beta-crystallins; a distribution of charged residues on the surface as in the gamma-crystallins; and finally the nature of certain residues of its inter-domain contacts. beta s-Crystallin seems to be an old and isolated offshoot of the gamma-family, and, considering its ancient origin, might well be present in other, non-mammalian, vertebrate classes.

Full text

PDF
2600

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Berbers G. A., Brans A. M., Hoekman W. A., Slingsby C., Bloemendal H., De Jong W. W. Aggregation behavior of the bovine beta-crystallin Bp chain studied by limited proteolysis. Biochim Biophys Acta. 1983 Oct 28;748(2):213–219. doi: 10.1016/0167-4838(83)90297-2. [DOI] [PubMed] [Google Scholar]
  2. Berbers G. A., Hoekman W. A., Bloemendal H., de Jong W. W., Kleinschmidt T., Braunitzer G. Homology between the primary structures of the major bovine beta-crystallin chains. Eur J Biochem. 1984 Mar 15;139(3):467–479. doi: 10.1111/j.1432-1033.1984.tb08029.x. [DOI] [PubMed] [Google Scholar]
  3. Berbers G. A., Hoekman W. A., Bloemendal H., de Jong W. W., Kleinschmidt T., Braunitzer G. Proline- and alanine-rich N-terminal extension of the basic bovine beta-crystallin B1 chains. FEBS Lett. 1983 Sep 19;161(2):225–229. doi: 10.1016/0014-5793(83)81013-8. [DOI] [PubMed] [Google Scholar]
  4. Bhat S. P., Spector A. Complete nucleotide sequence of a cDNA derived from calf lens gamma-crystallin mRNA: presence of Alu I-like DNA sequences. DNA. 1984 Aug;3(4):287–295. doi: 10.1089/dna.1.1984.3.287. [DOI] [PubMed] [Google Scholar]
  5. Bindels J. G., Koppers A., Hoenders H. J. Structural aspects of bovine beta-crystallins: physical characterization including dissociation-association behavior. Exp Eye Res. 1981 Sep;33(3):333–343. doi: 10.1016/s0014-4835(81)80056-5. [DOI] [PubMed] [Google Scholar]
  6. Bindels J. G., de Man B. M., Hoenders H. J. High-performance gel permeation chromatography of bovine eye lens proteins in combination with low-angle laser light scattering. Superior resolution of the oligomeric beta-crystallins. J Chromatogr. 1982 Dec 3;252:255–267. doi: 10.1016/s0021-9673(01)88416-8. [DOI] [PubMed] [Google Scholar]
  7. Bloemendal H. Lens proteins. CRC Crit Rev Biochem. 1982;12(1):1–38. doi: 10.3109/10409238209105849. [DOI] [PubMed] [Google Scholar]
  8. Blundell T., Lindley P., Miller L., Moss D., Slingsby C., Tickle I., Turnell B., Wistow G. The molecular structure and stability of the eye lens: x-ray analysis of gamma-crystallin II. Nature. 1981 Feb 26;289(5800):771–777. doi: 10.1038/289771a0. [DOI] [PubMed] [Google Scholar]
  9. Breitman M. L., Lok S., Wistow G., Piatigorsky J., Tréton J. A., Gold R. J., Tsui L. C. Gamma-crystallin family of the mouse lens: structural and evolutionary relationships. Proc Natl Acad Sci U S A. 1984 Dec;81(24):7762–7766. doi: 10.1073/pnas.81.24.7762. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Crabbe M. J. Partial sequence homology of human myc oncogene protein to beta and gamma crystallins. FEBS Lett. 1985 Feb 11;181(1):157–159. doi: 10.1016/0014-5793(85)81133-9. [DOI] [PubMed] [Google Scholar]
  11. Driessen H. P., Herbrink P., Bloemendal H., de Jong W. W. Primary structure of the bovine beta-crystallin Bp chain. Internal duplication and homology with gamma-crystallin. Eur J Biochem. 1981 Dec;121(1):83–91. doi: 10.1111/j.1432-1033.1981.tb06433.x. [DOI] [PubMed] [Google Scholar]
  12. Fitch W. M., Margoliash E. Construction of phylogenetic trees. Science. 1967 Jan 20;155(3760):279–284. doi: 10.1126/science.155.3760.279. [DOI] [PubMed] [Google Scholar]
  13. Gorin M. B., Horwitz J. Cloning and characterization of a cow beta crystallin cDNA. Curr Eye Res. 1984 Jul;3(7):939–948. doi: 10.3109/02713688409167211. [DOI] [PubMed] [Google Scholar]
  14. Inana G., Piatigorsky J., Norman B., Slingsby C., Blundell T. Gene and protein structure of a beta-crystallin polypeptide in murine lens: relationship of exons and structural motifs. Nature. 1983 Mar 24;302(5906):310–315. doi: 10.1038/302310a0. [DOI] [PubMed] [Google Scholar]
  15. Inouye S., Franceschini T., Inouye M. Structural similarities between the development-specific protein S from a gram-negative bacterium, Myxococcus xanthus, and calmodulin. Proc Natl Acad Sci U S A. 1983 Nov;80(22):6829–6833. doi: 10.1073/pnas.80.22.6829. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Kabasawa I., Tsunematsu Y., Barber G. W., Kinoshita J. H. Low molecular weight proteins of the bovine lenses. Exp Eye Res. 1977 May;24(5):437–448. doi: 10.1016/0014-4835(77)90265-2. [DOI] [PubMed] [Google Scholar]
  17. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  18. McDevitt D. S., Croft L. R. On the existence of gamma-crystallin in the bird lens. Exp Eye Res. 1977 Nov;25(5):473–481. doi: 10.1016/0014-4835(77)90176-2. [DOI] [PubMed] [Google Scholar]
  19. Messing J., Crea R., Seeburg P. H. A system for shotgun DNA sequencing. Nucleic Acids Res. 1981 Jan 24;9(2):309–321. doi: 10.1093/nar/9.2.309. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. O'Farrell P. H. High resolution two-dimensional electrophoresis of proteins. J Biol Chem. 1975 May 25;250(10):4007–4021. [PMC free article] [PubMed] [Google Scholar]
  21. Piatigorsky J., Nickerson J. M., King C. R., Inana G., Hejtmancik J. F., Hawkins J. W., Borras T., Shinohara T., Wistow G., Norman B. Crystallin genes: templates for lens transparency. Ciba Found Symp. 1984;106:191–207. doi: 10.1002/9780470720875.ch11. [DOI] [PubMed] [Google Scholar]
  22. Prager E. M., Wilson A. C. Construction of phylogenetic trees for proteins and nucleic acids: empirical evaluation of alternative matrix methods. J Mol Evol. 1978 Jun 20;11(2):129–142. doi: 10.1007/BF01733889. [DOI] [PubMed] [Google Scholar]
  23. Proudfoot N. J., Brownlee G. G. 3' non-coding region sequences in eukaryotic messenger RNA. Nature. 1976 Sep 16;263(5574):211–214. doi: 10.1038/263211a0. [DOI] [PubMed] [Google Scholar]
  24. Quax-Jeuken Y., Janssen C., Quax W., van den Heuvel R., Bloemendal H. Bovine beta-crystallin complementary DNA clones. Alternating proline/alanine sequence of beta B1 subunit originates from a repetitive DNA sequence. J Mol Biol. 1984 Dec 15;180(3):457–472. doi: 10.1016/0022-2836(84)90022-6. [DOI] [PubMed] [Google Scholar]
  25. Sanger F., Coulson A. R., Barrell B. G., Smith A. J., Roe B. A. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing. J Mol Biol. 1980 Oct 25;143(2):161–178. doi: 10.1016/0022-2836(80)90196-5. [DOI] [PubMed] [Google Scholar]
  26. Schoenmakers J. G., den Dunnen J. T., Moormann R. J., Jongbloed R., van Leen R. W., Lubsen N. H. The crystallin gene families. Ciba Found Symp. 1984;106:208–218. doi: 10.1002/9780470720875.ch12. [DOI] [PubMed] [Google Scholar]
  27. Slingsby C., Croft L. R. Developmental changes in the low molecular weight proteins of the bovine lens. Exp Eye Res. 1973 Nov 25;17(4):369–376. doi: 10.1016/0014-4835(73)90246-7. [DOI] [PubMed] [Google Scholar]
  28. Tomarev S. I., Krayev A. S., Skryabin K. G., Bayev A. A., Gause G. G., Jr The nucleotide sequence of a cloned cDNA corresponding to one of the gamma-crystallins from the eye lens of the frog Rana temporaria. FEBS Lett. 1982 Sep 20;146(2):314–318. doi: 10.1016/0014-5793(82)80942-3. [DOI] [PubMed] [Google Scholar]
  29. Tomarev S. I., Zinovieva R. D., Chalovka P., Krayev A. S., Skryabin K. G., Gause G. G., Jr Multiple genes coding for the frog eye lens gamma-crystallins. Gene. 1984 Mar;27(3):301–308. doi: 10.1016/0378-1119(84)90074-x. [DOI] [PubMed] [Google Scholar]
  30. Tréton J. A., Jones R. E., King C. R., Piatigorsky J. Evidence against gamma-crystallin DNA or RNA sequences in the chicken. Exp Eye Res. 1984 Oct;39(4):513–522. doi: 10.1016/0014-4835(84)90051-4. [DOI] [PubMed] [Google Scholar]
  31. Wistow G., Slingsby C., Blundell T., Driessen H., De Jong W., Bloemendal H. Eye-lens proteins: the three-dimensional structure of beta-crystallin predicted from monomeric gamma-crystallin. FEBS Lett. 1981 Oct 12;133(1):9–16. doi: 10.1016/0014-5793(81)80460-7. [DOI] [PubMed] [Google Scholar]
  32. Wistow G., Summers L., Blundell T. Myxococcus xanthus spore coat protein S may have a similar structure to vertebrate lens beta gamma-crystallins. 1985 Jun 27-Jul 3Nature. 315(6022):771–773. doi: 10.1038/315771a0. [DOI] [PubMed] [Google Scholar]
  33. Wistow G., Turnell B., Summers L., Slingsby C., Moss D., Miller L., Lindley P., Blundell T. X-ray analysis of the eye lens protein gamma-II crystallin at 1.9 A resolution. J Mol Biol. 1983 Oct 15;170(1):175–202. doi: 10.1016/s0022-2836(83)80232-0. [DOI] [PubMed] [Google Scholar]
  34. Zigler J. S., Jr, Horwitz J., Kinoshita J. H. Studies on the low molecular weight proteins of human lens. Exp Eye Res. 1981 Jan;32(1):21–30. doi: 10.1016/s0014-4835(81)80035-8. [DOI] [PubMed] [Google Scholar]
  35. den Dunnen J. T., Moormann R. J., Schoenmakers J. G. Rat lens beta-crystallins are internally duplicated and homologous to gamma-crystallins. Biochim Biophys Acta. 1985 Apr 19;824(4):295–303. doi: 10.1016/0167-4781(85)90035-1. [DOI] [PubMed] [Google Scholar]
  36. van Dam A. F. Purification and composition of beta-s-crystallin. Exp Eye Res. 1966 Oct;5(4):255–266. doi: 10.1016/s0014-4835(66)80035-0. [DOI] [PubMed] [Google Scholar]

Articles from The EMBO Journal are provided here courtesy of Nature Publishing Group

RESOURCES